RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 AHDC1Q5TGY3 1603 aaPredicted RBP17.91■□□□□ 0.46
PRKD3-209ENST00000477132 NHSL1Q5SYE7 1610 aa17.9■□□□□ 0.46
PRKD3-209ENST00000477132 WAPLQ7Z5K2 1190 aa17.89■□□□□ 0.45
PRKD3-209ENST00000477132 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
PRKD3-209ENST00000477132 BRINP3Q76B58 766 aa17.88■□□□□ 0.45
PRKD3-209ENST00000477132 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
PRKD3-209ENST00000477132 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
PRKD3-209ENST00000477132 KIAA1210Q9ULL0 1709 aa17.87■□□□□ 0.45
PRKD3-209ENST00000477132 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
PRKD3-209ENST00000477132 FMN2Q9NZ56 1722 aa17.86■□□□□ 0.45
PRKD3-209ENST00000477132 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
PRKD3-209ENST00000477132 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
PRKD3-209ENST00000477132 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
PRKD3-209ENST00000477132 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
PRKD3-209ENST00000477132 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
PRKD3-209ENST00000477132 DDX17Q92841 729 aaKnown RBP17.81■□□□□ 0.44
PRKD3-209ENST00000477132 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
PRKD3-209ENST00000477132 ADGRB2O60241 1585 aa17.81■□□□□ 0.44
PRKD3-209ENST00000477132 ORAI2Q96SN7 254 aa17.8■□□□□ 0.44
PRKD3-209ENST00000477132 TRAK1Q9UPV9 953 aa17.8■□□□□ 0.44
PRKD3-209ENST00000477132 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
PRKD3-209ENST00000477132 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
PRKD3-209ENST00000477132 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
PRKD3-209ENST00000477132 L3MBTL2Q969R5 705 aa17.79■□□□□ 0.44
PRKD3-209ENST00000477132 USP32Q8NFA0 1604 aa17.79■□□□□ 0.44
PRKD3-209ENST00000477132 JCADQ9P266 1359 aa17.79■□□□□ 0.44
PRKD3-209ENST00000477132 TRPM1Q7Z4N2 1603 aa17.78■□□□□ 0.44
PRKD3-209ENST00000477132 NUTM2FA1L443 756 aa17.77■□□□□ 0.44
PRKD3-209ENST00000477132 LRP6O75581 1613 aa17.76■□□□□ 0.43
PRKD3-209ENST00000477132 NBPF1Q3BBV0 1214 aa17.76■□□□□ 0.43
PRKD3-209ENST00000477132 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
PRKD3-209ENST00000477132 KIF1AQ12756 1690 aa17.74■□□□□ 0.43
PRKD3-209ENST00000477132 POGKQ9P215 609 aa17.74■□□□□ 0.43
PRKD3-209ENST00000477132 PXDNQ92626 1479 aa17.72■□□□□ 0.43
PRKD3-209ENST00000477132 ESCO1Q5FWF5 840 aa17.72■□□□□ 0.43
PRKD3-209ENST00000477132 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
PRKD3-209ENST00000477132 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
PRKD3-209ENST00000477132 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
PRKD3-209ENST00000477132 HIRIP3Q9BW71 556 aaPredicted RBP17.71■□□□□ 0.43
PRKD3-209ENST00000477132 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
PRKD3-209ENST00000477132 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
PRKD3-209ENST00000477132 TULP4Q9NRJ4 1543 aa17.69■□□□□ 0.42
PRKD3-209ENST00000477132 QRICH2Q9H0J4 1663 aa17.69■□□□□ 0.42
PRKD3-209ENST00000477132 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
PRKD3-209ENST00000477132 SPATA31A6Q5VVP1 1343 aa17.69■□□□□ 0.42
PRKD3-209ENST00000477132 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
PRKD3-209ENST00000477132 NBPF8Q3BBV2 869 aa17.68■□□□□ 0.42
PRKD3-209ENST00000477132 ANKARQ7Z5J8 1434 aa17.68■□□□□ 0.42
PRKD3-209ENST00000477132 PCGF6Q9BYE7 350 aa17.68■□□□□ 0.42
PRKD3-209ENST00000477132 FOXO3O43524 673 aa17.67■□□□□ 0.42
PRKD3-209ENST00000477132 XPCQ01831 940 aaPredicted RBP17.67■□□□□ 0.42
PRKD3-209ENST00000477132 LRRC59Q96AG4 307 aaKnown RBP17.67■□□□□ 0.42
PRKD3-209ENST00000477132 PRR36Q9H6K5 1346 aa17.67■□□□□ 0.42
PRKD3-209ENST00000477132 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
PRKD3-209ENST00000477132 NPHP3Q7Z494 1330 aa17.66■□□□□ 0.42
PRKD3-209ENST00000477132 TOPAZ1Q8N9V7 1692 aa17.65■□□□□ 0.42
PRKD3-209ENST00000477132 ITSN1Q15811 1721 aa17.65■□□□□ 0.42
PRKD3-209ENST00000477132 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
PRKD3-209ENST00000477132 ATP7BP35670 1465 aa17.64■□□□□ 0.41
PRKD3-209ENST00000477132 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
PRKD3-209ENST00000477132 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
PRKD3-209ENST00000477132 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
PRKD3-209ENST00000477132 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
PRKD3-209ENST00000477132 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
PRKD3-209ENST00000477132 TRPM3Q9HCF6 1732 aaPredicted RBP17.63■□□□□ 0.41
PRKD3-209ENST00000477132 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
PRKD3-209ENST00000477132 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
PRKD3-209ENST00000477132 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
PRKD3-209ENST00000477132 RALGAPBQ86X10 1494 aa17.61■□□□□ 0.41
PRKD3-209ENST00000477132 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
PRKD3-209ENST00000477132 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
PRKD3-209ENST00000477132 MARF1Q9Y4F3 1742 aaKnown RBP17.6■□□□□ 0.41
PRKD3-209ENST00000477132 ABCA3Q99758 1704 aa17.59■□□□□ 0.41
PRKD3-209ENST00000477132 POTEAQ6S8J7 498 aa17.59■□□□□ 0.41
PRKD3-209ENST00000477132 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.4
PRKD3-209ENST00000477132 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
PRKD3-209ENST00000477132 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
PRKD3-209ENST00000477132 ALS2Q96Q42 1657 aa17.58■□□□□ 0.4
PRKD3-209ENST00000477132 TNS3Q68CZ2 1445 aa17.57■□□□□ 0.4
PRKD3-209ENST00000477132 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
PRKD3-209ENST00000477132 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
PRKD3-209ENST00000477132 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
PRKD3-209ENST00000477132 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
PRKD3-209ENST00000477132 CRYBG1Q9Y4K1 1723 aa17.54■□□□□ 0.4
PRKD3-209ENST00000477132 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
PRKD3-209ENST00000477132 PSME1Q06323 249 aa17.52■□□□□ 0.4
PRKD3-209ENST00000477132 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
PRKD3-209ENST00000477132 RNF39Q9H2S5 420 aa17.52■□□□□ 0.4
PRKD3-209ENST00000477132 AFF2P51816 1311 aa17.51■□□□□ 0.39
PRKD3-209ENST00000477132 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
PRKD3-209ENST00000477132 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
PRKD3-209ENST00000477132 SOCS7O14512 581 aa17.5■□□□□ 0.39
PRKD3-209ENST00000477132 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
PRKD3-209ENST00000477132 PPIP5K1Q6PFW1 1433 aa17.49■□□□□ 0.39
PRKD3-209ENST00000477132 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
PRKD3-209ENST00000477132 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
PRKD3-209ENST00000477132 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
PRKD3-209ENST00000477132 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
PRKD3-209ENST00000477132 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
PRKD3-209ENST00000477132 ACEP12821 1306 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms