RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 RNF40O75150 1001 aa7.5□□□□□ -1.21
NPHP3-207ENST00000476742 Q8N3U1 123 aa7.5□□□□□ -1.21
NPHP3-207ENST00000476742 MAP2K5Q13163 448 aa7.49□□□□□ -1.21
NPHP3-207ENST00000476742 BARGINQ6ZT62 677 aa7.49□□□□□ -1.21
NPHP3-207ENST00000476742 TTC13Q8NBP0 860 aa7.49□□□□□ -1.21
NPHP3-207ENST00000476742 SMAPO00193 183 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 OATP04181 439 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 VEGFBP49765 207 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 PNMA3Q9UL41 463 aa7.48□□□□□ -1.21
NPHP3-207ENST00000476742 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-207ENST00000476742 FECHP22830 423 aa7.47□□□□□ -1.21
NPHP3-207ENST00000476742 RBM46Q8TBY0 533 aaKnown RBP7.47□□□□□ -1.21
NPHP3-207ENST00000476742 TATDN2Q93075 761 aa7.47□□□□□ -1.21
NPHP3-207ENST00000476742 FAM198AQ9UFP1 575 aa7.47□□□□□ -1.21
NPHP3-207ENST00000476742 IRF6O14896 467 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 TLL1O43897 1013 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.22
NPHP3-207ENST00000476742 HDGFP51858 240 aaKnown RBP7.45□□□□□ -1.22
NPHP3-207ENST00000476742 PCDHB3Q9Y5E6 796 aa7.44□□□□□ -1.22
NPHP3-207ENST00000476742 FAM161AQ3B820 660 aa7.43□□□□□ -1.22
NPHP3-207ENST00000476742 CCDC102AQ96A19 550 aa7.43□□□□□ -1.22
NPHP3-207ENST00000476742 TTC24A2A3L6 582 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-207ENST00000476742 SMPD1P17405 629 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 AK7Q96M32 723 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 EYA1Q99502 592 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 PRR14Q9BWN1 585 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
NPHP3-207ENST00000476742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
NPHP3-207ENST00000476742 DNAJB2P25686 324 aa7.41□□□□□ -1.22
NPHP3-207ENST00000476742 RPIAP49247 311 aa7.41□□□□□ -1.22
NPHP3-207ENST00000476742 METTL3Q86U44 580 aaKnown RBP7.41□□□□□ -1.22
NPHP3-207ENST00000476742 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
NPHP3-207ENST00000476742 C3orf80F5H4A9 247 aa7.4□□□□□ -1.22
NPHP3-207ENST00000476742 VSIG8P0DPA2 414 aa7.4□□□□□ -1.22
NPHP3-207ENST00000476742 SLC4A3P48751 1232 aa7.4□□□□□ -1.22
NPHP3-207ENST00000476742 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
NPHP3-207ENST00000476742 SLF2Q8IX21 1173 aa7.37□□□□□ -1.23
NPHP3-207ENST00000476742 CD2BP2O95400 341 aaKnown RBP7.36□□□□□ -1.23
NPHP3-207ENST00000476742 ADH1BP00325 375 aa7.36□□□□□ -1.23
NPHP3-207ENST00000476742 PRKCSHP14314 528 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-207ENST00000476742 SWT1Q5T5J6 900 aaKnown RBP7.36□□□□□ -1.23
NPHP3-207ENST00000476742 TMEM134Q9H6X4 195 aa7.36□□□□□ -1.23
NPHP3-207ENST00000476742 TRIM66O15016 1216 aa7.35□□□□□ -1.23
NPHP3-207ENST00000476742 CLCN1P35523 988 aa7.35□□□□□ -1.23
NPHP3-207ENST00000476742 DAXXQ9UER7 740 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-207ENST00000476742 MDM2Q00987 491 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-207ENST00000476742 AMHR2Q16671 573 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 RSPH4AQ5TD94 716 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 SNIP1Q8TAD8 396 aaKnown RBP7.34□□□□□ -1.23
NPHP3-207ENST00000476742 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 SLC6A16Q9GZN6 736 aa7.34□□□□□ -1.23
NPHP3-207ENST00000476742 IRS1P35568 1242 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 TTLL12Q14166 644 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-207ENST00000476742 KANK3Q6NY19 840 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 GPCPD1Q9NPB8 672 aa7.33□□□□□ -1.24
NPHP3-207ENST00000476742 MSTNO14793 375 aa7.32□□□□□ -1.24
NPHP3-207ENST00000476742 PDE4DQ08499 809 aa7.32□□□□□ -1.24
NPHP3-207ENST00000476742 NLRP7Q8WX94 980 aa7.32□□□□□ -1.24
NPHP3-207ENST00000476742 DDX11L8A8MPP1 907 aa7.3□□□□□ -1.24
NPHP3-207ENST00000476742 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
NPHP3-207ENST00000476742 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
NPHP3-207ENST00000476742 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
NPHP3-207ENST00000476742 HPS1Q92902 700 aa7.29□□□□□ -1.24
NPHP3-207ENST00000476742 GIGYF2Q6Y7W6 1299 aaKnown RBP7.28□□□□□ -1.24
NPHP3-207ENST00000476742 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
NPHP3-207ENST00000476742 J3QL48 77 aa7.27□□□□□ -1.25
NPHP3-207ENST00000476742 K7ELQ4 463 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-207ENST00000476742 KMT5BQ4FZB7 885 aa7.27□□□□□ -1.25
NPHP3-207ENST00000476742 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-207ENST00000476742 NEUROD2Q15784 382 aa7.26□□□□□ -1.25
NPHP3-207ENST00000476742 SPOCK3Q9BQ16 436 aa7.26□□□□□ -1.25
NPHP3-207ENST00000476742 REPIN1Q9BWE0 567 aaKnown RBP7.26□□□□□ -1.25
NPHP3-207ENST00000476742 FAM217BQ9NTX9 383 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-207ENST00000476742 WNT7AO00755 349 aa7.25□□□□□ -1.25
NPHP3-207ENST00000476742 SLC10A3P09131 477 aa7.25□□□□□ -1.25
NPHP3-207ENST00000476742 CFHP08603 1231 aa7.24□□□□□ -1.25
NPHP3-207ENST00000476742 CD46P15529 392 aa7.24□□□□□ -1.25
NPHP3-207ENST00000476742 KDM4CQ9H3R0 1056 aa7.23□□□□□ -1.25
NPHP3-207ENST00000476742 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-207ENST00000476742 GCGRP47871 477 aa7.22□□□□□ -1.25
NPHP3-207ENST00000476742 TRIM46Q7Z4K8 759 aa7.22□□□□□ -1.25
NPHP3-207ENST00000476742 MS4A1P11836 297 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 BRPF1P55201 1214 aaPredicted RBP7.21□□□□□ -1.26
NPHP3-207ENST00000476742 DIXDC1Q155Q3 683 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 PLA2G4EQ3MJ16 856 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 GRIPAP1Q4V328 841 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 NUTM1Q86Y26 1132 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 BEGAINQ9BUH8 593 aa7.21□□□□□ -1.26
NPHP3-207ENST00000476742 ACTN4O43707 911 aaKnown RBP7.2□□□□□ -1.26
NPHP3-207ENST00000476742 DDRGK1Q96HY6 314 aa7.2□□□□□ -1.26
NPHP3-207ENST00000476742 KDM4AO75164 1064 aa7.19□□□□□ -1.26
NPHP3-207ENST00000476742 USP46P62068 366 aa7.19□□□□□ -1.26
NPHP3-207ENST00000476742 NR1I2O75469 434 aa7.18□□□□□ -1.26
NPHP3-207ENST00000476742 PROCP04070 461 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms