RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 KDM2AQ9Y2K7 1162 aa26.14■■□□□ 1.78
RAPGEF3-208ENST00000476259 PLEKHH1Q9ULM0 1364 aa26.14■■□□□ 1.78
RAPGEF3-208ENST00000476259 FMN2Q9NZ56 1722 aa26.13■■□□□ 1.77
RAPGEF3-208ENST00000476259 SPATA31A6Q5VVP1 1343 aa26.12■■□□□ 1.77
RAPGEF3-208ENST00000476259 DDX17Q92841 729 aaKnown RBP26.11■■□□□ 1.77
RAPGEF3-208ENST00000476259 ORAI2Q96SN7 254 aa26.11■■□□□ 1.77
RAPGEF3-208ENST00000476259 RGS17Q9UGC6 210 aaPredicted RBP26.11■■□□□ 1.77
RAPGEF3-208ENST00000476259 ADGRB1O14514 1584 aa26.11■■□□□ 1.77
RAPGEF3-208ENST00000476259 LRP6O75581 1613 aa26.1■■□□□ 1.77
RAPGEF3-208ENST00000476259 SIRT1Q96EB6 747 aa26.09■■□□□ 1.77
RAPGEF3-208ENST00000476259 STAC3Q96MF2 364 aa26.09■■□□□ 1.77
RAPGEF3-208ENST00000476259 DLC1Q96QB1 1528 aa26.09■■□□□ 1.77
RAPGEF3-208ENST00000476259 RGPD8O14715 1765 aaPredicted RBP26.07■■□□□ 1.76
RAPGEF3-208ENST00000476259 LRRC59Q96AG4 307 aaKnown RBP26.07■■□□□ 1.76
RAPGEF3-208ENST00000476259 NUTM2FA1L443 756 aa26.03■■□□□ 1.76
RAPGEF3-208ENST00000476259 ESCO1Q5FWF5 840 aa26.03■■□□□ 1.76
RAPGEF3-208ENST00000476259 MEX3CQ5U5Q3 659 aaKnown RBP26.02■■□□□ 1.76
RAPGEF3-208ENST00000476259 PRAM1Q96QH2 718 aa26.02■■□□□ 1.76
RAPGEF3-208ENST00000476259 KIF1AQ12756 1690 aa26.02■■□□□ 1.76
RAPGEF3-208ENST00000476259 KIAA1210Q9ULL0 1709 aa26.02■■□□□ 1.76
RAPGEF3-208ENST00000476259 PNPLA6Q8IY17 1366 aa26.01■■□□□ 1.75
RAPGEF3-208ENST00000476259 ARHGEF28Q8N1W1 1705 aaKnown RBP26.01■■□□□ 1.75
RAPGEF3-208ENST00000476259 SOS2Q07890 1332 aaPredicted RBP26■■□□□ 1.75
RAPGEF3-208ENST00000476259 NUTM2BA6NNL0 878 aaPredicted RBP26■■□□□ 1.75
RAPGEF3-208ENST00000476259 NUTM2EB1AL46 878 aaPredicted RBP26■■□□□ 1.75
RAPGEF3-208ENST00000476259 SAFB2Q14151 953 aaKnown RBP eCLIP26■■□□□ 1.75
RAPGEF3-208ENST00000476259 NUTM2AQ8IVF1 878 aaPredicted RBP26■■□□□ 1.75
RAPGEF3-208ENST00000476259 ADGRB2O60241 1585 aa25.99■■□□□ 1.75
RAPGEF3-208ENST00000476259 POGKQ9P215 609 aa25.99■■□□□ 1.75
RAPGEF3-208ENST00000476259 TRAK1Q9UPV9 953 aa25.99■■□□□ 1.75
RAPGEF3-208ENST00000476259 POTEAQ6S8J7 498 aa25.98■■□□□ 1.75
RAPGEF3-208ENST00000476259 NPHP3Q7Z494 1330 aa25.97■■□□□ 1.75
RAPGEF3-208ENST00000476259 PXDNQ92626 1479 aa25.96■■□□□ 1.75
RAPGEF3-208ENST00000476259 COL22A1Q8NFW1 1626 aaPredicted RBP25.96■■□□□ 1.75
RAPGEF3-208ENST00000476259 USP32Q8NFA0 1604 aa25.94■■□□□ 1.74
RAPGEF3-208ENST00000476259 FOXO3O43524 673 aa25.93■■□□□ 1.74
RAPGEF3-208ENST00000476259 XPCQ01831 940 aaPredicted RBP25.9■■□□□ 1.74
RAPGEF3-208ENST00000476259 MINK1Q8N4C8 1332 aaPredicted RBP25.88■■□□□ 1.73
RAPGEF3-208ENST00000476259 ZNF772Q68DY9 489 aaPredicted RBP25.88■■□□□ 1.73
RAPGEF3-208ENST00000476259 HIRIP3Q9BW71 556 aaPredicted RBP25.88■■□□□ 1.73
RAPGEF3-208ENST00000476259 MARF1Q9Y4F3 1742 aaKnown RBP25.88■■□□□ 1.73
RAPGEF3-208ENST00000476259 ANKARQ7Z5J8 1434 aa25.88■■□□□ 1.73
RAPGEF3-208ENST00000476259 SIN3AQ96ST3 1273 aa25.87■■□□□ 1.73
RAPGEF3-208ENST00000476259 PHF8Q9UPP1 1060 aa25.86■■□□□ 1.73
RAPGEF3-208ENST00000476259 AFF2P51816 1311 aa25.85■■□□□ 1.73
RAPGEF3-208ENST00000476259 TULP4Q9NRJ4 1543 aa25.84■■□□□ 1.73
RAPGEF3-208ENST00000476259 TRIM26Q12899 539 aaPredicted RBP25.84■■□□□ 1.73
RAPGEF3-208ENST00000476259 ITSN1Q15811 1721 aa25.84■■□□□ 1.73
RAPGEF3-208ENST00000476259 C8orf37Q96NL8 207 aa25.84■■□□□ 1.73
RAPGEF3-208ENST00000476259 ADAMTS2O95450 1211 aa25.83■■□□□ 1.73
RAPGEF3-208ENST00000476259 L3MBTL2Q969R5 705 aa25.83■■□□□ 1.73
RAPGEF3-208ENST00000476259 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
RAPGEF3-208ENST00000476259 NEUROD1Q13562 356 aa25.82■■□□□ 1.72
RAPGEF3-208ENST00000476259 TRPM1Q7Z4N2 1603 aa25.81■■□□□ 1.72
RAPGEF3-208ENST00000476259 NBPF1Q3BBV0 1214 aa25.81■■□□□ 1.72
RAPGEF3-208ENST00000476259 KRT28Q7Z3Y7 464 aa25.81■■□□□ 1.72
RAPGEF3-208ENST00000476259 WASLO00401 505 aaPredicted RBP25.8■■□□□ 1.72
RAPGEF3-208ENST00000476259 SPATA31A3Q5VYP0 1347 aa25.79■■□□□ 1.72
RAPGEF3-208ENST00000476259 PMFBP1Q8TBY8 1022 aa25.78■■□□□ 1.72
RAPGEF3-208ENST00000476259 NGLY1Q96IV0 654 aa25.77■■□□□ 1.72
RAPGEF3-208ENST00000476259 PRR36Q9H6K5 1346 aa25.77■■□□□ 1.72
RAPGEF3-208ENST00000476259 TNS3Q68CZ2 1445 aa25.77■■□□□ 1.72
RAPGEF3-208ENST00000476259 TRPM3Q9HCF6 1732 aaPredicted RBP25.77■■□□□ 1.72
RAPGEF3-208ENST00000476259 PSME1Q06323 249 aa25.76■■□□□ 1.71
RAPGEF3-208ENST00000476259 QRICH2Q9H0J4 1663 aa25.76■■□□□ 1.71
RAPGEF3-208ENST00000476259 ABCA3Q99758 1704 aa25.75■■□□□ 1.71
RAPGEF3-208ENST00000476259 ATP7BP35670 1465 aa25.74■■□□□ 1.71
RAPGEF3-208ENST00000476259 TOPAZ1Q8N9V7 1692 aa25.74■■□□□ 1.71
RAPGEF3-208ENST00000476259 SBNO1A3KN83 1393 aa25.73■■□□□ 1.71
RAPGEF3-208ENST00000476259 RXRBP28702 533 aa25.73■■□□□ 1.71
RAPGEF3-208ENST00000476259 ALS2Q96Q42 1657 aa25.71■■□□□ 1.71
RAPGEF3-208ENST00000476259 QTRT2Q9H974 415 aaKnown RBP25.7■■□□□ 1.7
RAPGEF3-208ENST00000476259 CDK12Q9NYV4 1490 aaPredicted RBP25.69■■□□□ 1.7
RAPGEF3-208ENST00000476259 CDK19Q9BWU1 502 aa25.69■■□□□ 1.7
RAPGEF3-208ENST00000476259 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
RAPGEF3-208ENST00000476259 CENPJQ9HC77 1338 aaPredicted RBP25.68■■□□□ 1.7
RAPGEF3-208ENST00000476259 LMOD2Q6P5Q4 547 aa25.68■■□□□ 1.7
RAPGEF3-208ENST00000476259 NUDT16Q96DE0 195 aaKnown RBP25.68■■□□□ 1.7
RAPGEF3-208ENST00000476259 USP21Q9UK80 565 aa25.68■■□□□ 1.7
RAPGEF3-208ENST00000476259 ARHGEF10O15013 1369 aa25.68■■□□□ 1.7
RAPGEF3-208ENST00000476259 FNBP4Q8N3X1 1017 aaPredicted RBP25.67■■□□□ 1.7
RAPGEF3-208ENST00000476259 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.66■■□□□ 1.7
RAPGEF3-208ENST00000476259 NGDNQ8NEJ9 315 aaKnown RBP25.66■■□□□ 1.7
RAPGEF3-208ENST00000476259 ROCK2O75116 1388 aaKnown RBP25.65■■□□□ 1.7
RAPGEF3-208ENST00000476259 HAP1P54257 671 aaPredicted RBP25.64■■□□□ 1.7
RAPGEF3-208ENST00000476259 RBM6P78332 1123 aaKnown RBP25.64■■□□□ 1.7
RAPGEF3-208ENST00000476259 PLCH1Q4KWH8 1693 aa25.64■■□□□ 1.69
RAPGEF3-208ENST00000476259 PLEKHG5O94827 1062 aa25.63■■□□□ 1.69
RAPGEF3-208ENST00000476259 CABLES1Q8TDN4 633 aa25.63■■□□□ 1.69
RAPGEF3-208ENST00000476259 CRYBG1Q9Y4K1 1723 aa25.63■■□□□ 1.69
RAPGEF3-208ENST00000476259 TONSLQ96HA7 1378 aa25.62■■□□□ 1.69
RAPGEF3-208ENST00000476259 BCL9LQ86UU0 1499 aa25.61■■□□□ 1.69
RAPGEF3-208ENST00000476259 TRPC5Q9UL62 973 aaPredicted RBP25.61■■□□□ 1.69
RAPGEF3-208ENST00000476259 RGS12O14924 1447 aa25.61■■□□□ 1.69
RAPGEF3-208ENST00000476259 ATRNO75882 1429 aa25.61■■□□□ 1.69
RAPGEF3-208ENST00000476259 NBPF8Q3BBV2 869 aa25.6■■□□□ 1.69
RAPGEF3-208ENST00000476259 NWD2Q9ULI1 1742 aa25.6■■□□□ 1.69
RAPGEF3-208ENST00000476259 SRPK2P78362 688 aaKnown RBP25.59■■□□□ 1.69
RAPGEF3-208ENST00000476259 CCDC61Q9Y6R9 512 aa25.59■■□□□ 1.69
RAPGEF3-208ENST00000476259 SLIT2O94813 1529 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms