RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 FAM43AQ8N2R8 423 aa7.51□□□□□ -1.21
HNRNPU-208ENST00000475997 IL27Q8NEV9 243 aa7.51□□□□□ -1.21
HNRNPU-208ENST00000475997 HDGFL2Q7Z4V5 671 aaPredicted RBP7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 SCAPERQ9BY12 1400 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 EVC2Q86UK5 1308 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 FRAT2O75474 233 aaPredicted RBP7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 KIF3AQ9Y496 699 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 VGFO15240 615 aaPredicted RBP7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 TERF2IPQ9NYB0 399 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 ADGRL2O95490 1459 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 MLECQ14165 292 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 TPM2P07951 284 aa7.5□□□□□ -1.21
HNRNPU-208ENST00000475997 MINK1Q8N4C8 1332 aaPredicted RBP7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 GGNBP2Q9H3C7 697 aa7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 CABP2Q9NPB3 220 aa7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 FAM135AQ9P2D6 1515 aa7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 RDXP35241 583 aaKnown RBP7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 ATP6V1DQ9Y5K8 247 aa7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 WWC1Q8IX03 1113 aa7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 DZIP1LQ8IYY4 767 aaKnown RBP7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 TSR1Q2NL82 804 aaKnown RBP7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 DIAPH3Q9NSV4 1193 aa7.49□□□□□ -1.21
HNRNPU-208ENST00000475997 CLSTN1O94985 981 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 TPM1P09493 284 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 ARHGEF12Q9NZN5 1544 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 ADGRF5Q8IZF2 1346 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 SOX12O15370 315 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 CHMP4CQ96CF2 233 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 KIF16BQ96L93 1317 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 GOLGA6L19H0YKK7 550 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 ST18O60284 1047 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 HSP90B2PQ58FF3 399 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 TAOK2Q9UL54 1235 aa7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 DDX49Q9Y6V7 483 aaKnown RBP7.48□□□□□ -1.21
HNRNPU-208ENST00000475997 BRPF3Q9ULD4 1205 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 APBB1O00213 710 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 RIPK4P57078 832 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 DCTN1Q14203 1278 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 PDZRN3Q9UPQ7 1066 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 TSR2Q969E8 191 aaKnown RBP7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 PLEKHH1Q9ULM0 1364 aa7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 HSP90B1P14625 803 aaKnown RBP7.47□□□□□ -1.21
HNRNPU-208ENST00000475997 SYCP2Q9BX26 1530 aa7.46□□□□□ -1.21
HNRNPU-208ENST00000475997 EIF4G3O43432 1585 aaKnown RBP7.46□□□□□ -1.21
HNRNPU-208ENST00000475997 AK7Q96M32 723 aa7.46□□□□□ -1.21
HNRNPU-208ENST00000475997 CCAR2Q8N163 923 aaKnown RBP7.46□□□□□ -1.21
HNRNPU-208ENST00000475997 SHANK2Q9UPX8 1470 aa7.46□□□□□ -1.22
HNRNPU-208ENST00000475997 BECN2A8MW95 431 aa7.46□□□□□ -1.22
HNRNPU-208ENST00000475997 EXOSC9Q06265 439 aaKnown RBP7.46□□□□□ -1.22
HNRNPU-208ENST00000475997 TAF3Q5VWG9 929 aa7.46□□□□□ -1.22
HNRNPU-208ENST00000475997 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
HNRNPU-208ENST00000475997 H0YHG0 523 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 IPO7O95373 1038 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 IGHDP01880 384 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 FOXD4L1Q9NU39 408 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 A2MP01023 1474 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 DDX19BQ9UMR2 479 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 HMGN5P82970 282 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 USP8P40818 1118 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 ANKRD45Q5TZF3 282 aa7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 SCAF11Q99590 1463 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-208ENST00000475997 LNPKQ9C0E8 428 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 KDM5CP41229 1560 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 RUFY1Q96T51 708 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 NUP160Q12769 1436 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 NKTRP30414 1462 aaKnown RBP7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 PLEKHG5O94827 1062 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 RARSP54136 660 aaKnown RBP7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 WDR63Q8IWG1 891 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 HDAC5Q9UQL6 1122 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 NSD3Q9BZ95 1437 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 BCORL1Q5H9F3 1711 aa7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
HNRNPU-208ENST00000475997 ERCC4Q92889 916 aaPredicted RBP7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 C22orf23Q9BZE7 217 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 AAMPQ13685 434 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 CARD14Q9BXL6 1004 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 HMOX1P09601 288 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 TRAPPC8Q9Y2L5 1435 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 MBD5Q9P267 1494 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 CEP170Q5SW79 1584 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 NUTM2FA1L443 756 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 RRP9O43818 475 aaKnown RBP7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 SF3A1Q15459 793 aaKnown RBP7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 MNS1Q8NEH6 495 aa7.43□□□□□ -1.22
HNRNPU-208ENST00000475997 GPRASP1Q5JY77 1395 aa7.42□□□□□ -1.22
HNRNPU-208ENST00000475997 C8orf34Q49A92 452 aa7.42□□□□□ -1.22
HNRNPU-208ENST00000475997 C14orf37Q86TY3 774 aa7.42□□□□□ -1.22
HNRNPU-208ENST00000475997 ABCC10Q5T3U5 1492 aa7.42□□□□□ -1.22
HNRNPU-208ENST00000475997 MRE11P49959 708 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms