RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
CNN3-205ENST00000474409 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
CNN3-205ENST00000474409 USP32Q8NFA0 1604 aa11.68□□□□□ -0.54
CNN3-205ENST00000474409 PLEKHH1Q9ULM0 1364 aa11.67□□□□□ -0.54
CNN3-205ENST00000474409 KCNA6P17658 529 aa11.67□□□□□ -0.54
CNN3-205ENST00000474409 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
CNN3-205ENST00000474409 KIF20BQ96Q89 1820 aa11.67□□□□□ -0.54
CNN3-205ENST00000474409 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
CNN3-205ENST00000474409 DISP3Q9P2K9 1392 aa11.66□□□□□ -0.54
CNN3-205ENST00000474409 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
CNN3-205ENST00000474409 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
CNN3-205ENST00000474409 KIF1AQ12756 1690 aa11.65□□□□□ -0.55
CNN3-205ENST00000474409 MINK1Q8N4C8 1332 aaPredicted RBP11.64□□□□□ -0.55
CNN3-205ENST00000474409 TMF1P82094 1093 aa11.64□□□□□ -0.55
CNN3-205ENST00000474409 WAPLQ7Z5K2 1190 aa11.64□□□□□ -0.55
CNN3-205ENST00000474409 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
CNN3-205ENST00000474409 ZNF335Q9H4Z2 1342 aaPredicted RBP11.63□□□□□ -0.55
CNN3-205ENST00000474409 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
CNN3-205ENST00000474409 TESK2Q96S53 571 aa11.63□□□□□ -0.55
CNN3-205ENST00000474409 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
CNN3-205ENST00000474409 LTBP4Q8N2S1 1624 aa11.63□□□□□ -0.55
CNN3-205ENST00000474409 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
CNN3-205ENST00000474409 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
CNN3-205ENST00000474409 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
CNN3-205ENST00000474409 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
CNN3-205ENST00000474409 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
CNN3-205ENST00000474409 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
CNN3-205ENST00000474409 ATP7BP35670 1465 aa11.6□□□□□ -0.55
CNN3-205ENST00000474409 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
CNN3-205ENST00000474409 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
CNN3-205ENST00000474409 PROSER2Q86WR7 435 aaPredicted RBP11.6□□□□□ -0.55
CNN3-205ENST00000474409 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
CNN3-205ENST00000474409 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
CNN3-205ENST00000474409 NRKQ7Z2Y5 1582 aa11.59□□□□□ -0.55
CNN3-205ENST00000474409 DCCP43146 1447 aa11.59□□□□□ -0.55
CNN3-205ENST00000474409 MSH6P52701 1360 aa11.58□□□□□ -0.56
CNN3-205ENST00000474409 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.56
CNN3-205ENST00000474409 SRPK2P78362 688 aaKnown RBP11.58□□□□□ -0.56
CNN3-205ENST00000474409 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
CNN3-205ENST00000474409 C11orf95C9JLR9 678 aaPredicted RBP11.57□□□□□ -0.56
CNN3-205ENST00000474409 ANKARQ7Z5J8 1434 aa11.57□□□□□ -0.56
CNN3-205ENST00000474409 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
CNN3-205ENST00000474409 NHSL1Q5SYE7 1610 aa11.56□□□□□ -0.56
CNN3-205ENST00000474409 ROBO1Q9Y6N7 1651 aa11.55□□□□□ -0.56
CNN3-205ENST00000474409 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
CNN3-205ENST00000474409 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
CNN3-205ENST00000474409 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
CNN3-205ENST00000474409 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
CNN3-205ENST00000474409 TRPM3Q9HCF6 1732 aaPredicted RBP11.54□□□□□ -0.56
CNN3-205ENST00000474409 MST1RQ04912 1400 aa11.52□□□□□ -0.56
CNN3-205ENST00000474409 MARF1Q9Y4F3 1742 aaKnown RBP11.52□□□□□ -0.56
CNN3-205ENST00000474409 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.56
CNN3-205ENST00000474409 NUTM2FA1L443 756 aa11.52□□□□□ -0.57
CNN3-205ENST00000474409 ATF3P18847 181 aa11.52□□□□□ -0.57
CNN3-205ENST00000474409 TMC1Q8TDI8 760 aa11.52□□□□□ -0.57
CNN3-205ENST00000474409 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.57
CNN3-205ENST00000474409 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
CNN3-205ENST00000474409 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
CNN3-205ENST00000474409 PHLPP1O60346 1717 aa11.52□□□□□ -0.57
CNN3-205ENST00000474409 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
CNN3-205ENST00000474409 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
CNN3-205ENST00000474409 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
CNN3-205ENST00000474409 ANKRD36BQ8N2N9 1353 aa11.51□□□□□ -0.57
CNN3-205ENST00000474409 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
CNN3-205ENST00000474409 CD163L1Q9NR16 1453 aa11.51□□□□□ -0.57
CNN3-205ENST00000474409 ALS2Q96Q42 1657 aa11.5□□□□□ -0.57
CNN3-205ENST00000474409 CADPS2Q86UW7 1296 aa11.5□□□□□ -0.57
CNN3-205ENST00000474409 NUDT16Q96DE0 195 aaKnown RBP11.5□□□□□ -0.57
CNN3-205ENST00000474409 PRR36Q9H6K5 1346 aa11.5□□□□□ -0.57
CNN3-205ENST00000474409 LTN1O94822 1766 aa11.49□□□□□ -0.57
CNN3-205ENST00000474409 A0A1W2PP64 1363 aa11.49□□□□□ -0.57
CNN3-205ENST00000474409 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
CNN3-205ENST00000474409 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
CNN3-205ENST00000474409 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
CNN3-205ENST00000474409 CRYBG1Q9Y4K1 1723 aa11.47□□□□□ -0.57
CNN3-205ENST00000474409 HDGFL2Q7Z4V5 671 aaPredicted RBP11.47□□□□□ -0.57
CNN3-205ENST00000474409 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.57
CNN3-205ENST00000474409 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
CNN3-205ENST00000474409 KTN1Q86UP2 1357 aaKnown RBP11.46□□□□□ -0.57
CNN3-205ENST00000474409 SLC12A5Q9H2X9 1139 aa11.46□□□□□ -0.57
CNN3-205ENST00000474409 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.57
CNN3-205ENST00000474409 CABP1Q9NZU7 370 aa11.46□□□□□ -0.57
CNN3-205ENST00000474409 AHDC1Q5TGY3 1603 aaPredicted RBP11.46□□□□□ -0.58
CNN3-205ENST00000474409 USP6P35125 1406 aa11.45□□□□□ -0.58
CNN3-205ENST00000474409 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
CNN3-205ENST00000474409 POLR3AO14802 1390 aaPredicted RBP11.45□□□□□ -0.58
CNN3-205ENST00000474409 ESCO1Q5FWF5 840 aa11.45□□□□□ -0.58
CNN3-205ENST00000474409 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
CNN3-205ENST00000474409 PMFBP1Q8TBY8 1022 aa11.45□□□□□ -0.58
CNN3-205ENST00000474409 PANK3Q9H999 370 aa11.45□□□□□ -0.58
CNN3-205ENST00000474409 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
CNN3-205ENST00000474409 NGDNQ8NEJ9 315 aaKnown RBP11.44□□□□□ -0.58
CNN3-205ENST00000474409 ACEP12821 1306 aa11.43□□□□□ -0.58
CNN3-205ENST00000474409 COL16A1Q07092 1604 aaPredicted RBP11.42□□□□□ -0.58
CNN3-205ENST00000474409 RGPD5Q99666 1765 aa11.42□□□□□ -0.58
CNN3-205ENST00000474409 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
CNN3-205ENST00000474409 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
CNN3-205ENST00000474409 KNSTRNQ9Y448 316 aa11.42□□□□□ -0.58
CNN3-205ENST00000474409 PXDNQ92626 1479 aa11.42□□□□□ -0.58
CNN3-205ENST00000474409 NSD2O96028 1365 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms