RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 ORAI2Q96SN7 254 aa29.23■■■□□ 2.27
TMEM54-204ENST00000474144 SPATA31A6Q5VVP1 1343 aa29.21■■■□□ 2.27
TMEM54-204ENST00000474144 POTEAQ6S8J7 498 aa29.2■■■□□ 2.26
TMEM54-204ENST00000474144 CDC42BPGQ6DT37 1551 aa29.18■■■□□ 2.26
TMEM54-204ENST00000474144 LAMC1P11047 1609 aa29.18■■■□□ 2.26
TMEM54-204ENST00000474144 KDM2AQ9Y2K7 1162 aa29.17■■■□□ 2.26
TMEM54-204ENST00000474144 DCAF11Q8TEB1 546 aa29.15■■■□□ 2.26
TMEM54-204ENST00000474144 LRRC59Q96AG4 307 aaKnown RBP29.15■■■□□ 2.26
TMEM54-204ENST00000474144 NUTM2BA6NNL0 878 aaPredicted RBP29.14■■■□□ 2.26
TMEM54-204ENST00000474144 NUTM2EB1AL46 878 aaPredicted RBP29.14■■■□□ 2.26
TMEM54-204ENST00000474144 NUTM2AQ8IVF1 878 aaPredicted RBP29.14■■■□□ 2.26
TMEM54-204ENST00000474144 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
TMEM54-204ENST00000474144 NUTM2FA1L443 756 aa29.13■■■□□ 2.25
TMEM54-204ENST00000474144 MEX3CQ5U5Q3 659 aaKnown RBP29.13■■■□□ 2.25
TMEM54-204ENST00000474144 ESCO1Q5FWF5 840 aa29.11■■■□□ 2.25
TMEM54-204ENST00000474144 SIRT1Q96EB6 747 aa29.11■■■□□ 2.25
TMEM54-204ENST00000474144 PNPLA6Q8IY17 1366 aa29.1■■■□□ 2.25
TMEM54-204ENST00000474144 SOS2Q07890 1332 aaPredicted RBP29.09■■■□□ 2.25
TMEM54-204ENST00000474144 ADGRB1O14514 1584 aa29.09■■■□□ 2.25
TMEM54-204ENST00000474144 FMN2Q9NZ56 1722 aa29.07■■■□□ 2.24
TMEM54-204ENST00000474144 SAFB2Q14151 953 aaKnown RBP eCLIP29.06■■■□□ 2.24
TMEM54-204ENST00000474144 PRAM1Q96QH2 718 aa29.06■■■□□ 2.24
TMEM54-204ENST00000474144 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
TMEM54-204ENST00000474144 DLC1Q96QB1 1528 aa29.03■■■□□ 2.24
TMEM54-204ENST00000474144 FOXO3O43524 673 aa29.02■■■□□ 2.24
TMEM54-204ENST00000474144 XPCQ01831 940 aaPredicted RBP29.01■■■□□ 2.23
TMEM54-204ENST00000474144 STAC3Q96MF2 364 aa29■■■□□ 2.23
TMEM54-204ENST00000474144 RGPD8O14715 1765 aaPredicted RBP29■■■□□ 2.23
TMEM54-204ENST00000474144 NPHP3Q7Z494 1330 aa28.99■■■□□ 2.23
TMEM54-204ENST00000474144 PXDNQ92626 1479 aa28.99■■■□□ 2.23
TMEM54-204ENST00000474144 POGKQ9P215 609 aa28.99■■■□□ 2.23
TMEM54-204ENST00000474144 ZNF772Q68DY9 489 aaPredicted RBP28.97■■■□□ 2.23
TMEM54-204ENST00000474144 AFF2P51816 1311 aa28.95■■■□□ 2.23
TMEM54-204ENST00000474144 C8orf37Q96NL8 207 aa28.95■■■□□ 2.22
TMEM54-204ENST00000474144 ADAMTS2O95450 1211 aa28.94■■■□□ 2.22
TMEM54-204ENST00000474144 COL22A1Q8NFW1 1626 aaPredicted RBP28.93■■■□□ 2.22
TMEM54-204ENST00000474144 KIF1AQ12756 1690 aa28.93■■■□□ 2.22
TMEM54-204ENST00000474144 HIRIP3Q9BW71 556 aaPredicted RBP28.92■■■□□ 2.22
TMEM54-204ENST00000474144 ADGRB2O60241 1585 aa28.91■■■□□ 2.22
TMEM54-204ENST00000474144 MINK1Q8N4C8 1332 aaPredicted RBP28.91■■■□□ 2.22
TMEM54-204ENST00000474144 USP32Q8NFA0 1604 aa28.9■■■□□ 2.22
TMEM54-204ENST00000474144 PHF8Q9UPP1 1060 aa28.89■■■□□ 2.22
TMEM54-204ENST00000474144 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
TMEM54-204ENST00000474144 KRT28Q7Z3Y7 464 aa28.86■■■□□ 2.21
TMEM54-204ENST00000474144 NGLY1Q96IV0 654 aa28.85■■■□□ 2.21
TMEM54-204ENST00000474144 SIN3AQ96ST3 1273 aa28.85■■■□□ 2.21
TMEM54-204ENST00000474144 KIAA1210Q9ULL0 1709 aa28.84■■■□□ 2.21
TMEM54-204ENST00000474144 RXRBP28702 533 aa28.83■■■□□ 2.21
TMEM54-204ENST00000474144 NBPF1Q3BBV0 1214 aa28.83■■■□□ 2.21
TMEM54-204ENST00000474144 PMFBP1Q8TBY8 1022 aa28.83■■■□□ 2.21
TMEM54-204ENST00000474144 SPATA31A3Q5VYP0 1347 aa28.83■■■□□ 2.21
TMEM54-204ENST00000474144 ANKARQ7Z5J8 1434 aa28.83■■■□□ 2.21
TMEM54-204ENST00000474144 PRR36Q9H6K5 1346 aa28.81■■■□□ 2.2
TMEM54-204ENST00000474144 WASLO00401 505 aaPredicted RBP28.8■■■□□ 2.2
TMEM54-204ENST00000474144 QTRT2Q9H974 415 aaKnown RBP28.8■■■□□ 2.2
TMEM54-204ENST00000474144 L3MBTL2Q969R5 705 aa28.79■■■□□ 2.2
TMEM54-204ENST00000474144 TULP4Q9NRJ4 1543 aa28.79■■■□□ 2.2
TMEM54-204ENST00000474144 PSME1Q06323 249 aa28.77■■■□□ 2.2
TMEM54-204ENST00000474144 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
TMEM54-204ENST00000474144 MARF1Q9Y4F3 1742 aaKnown RBP28.77■■■□□ 2.2
TMEM54-204ENST00000474144 USP21Q9UK80 565 aa28.76■■■□□ 2.19
TMEM54-204ENST00000474144 TNS3Q68CZ2 1445 aa28.75■■■□□ 2.19
TMEM54-204ENST00000474144 FNBP4Q8N3X1 1017 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-204ENST00000474144 EIF3AQ14152 1382 aaKnown RBP28.74■■■□□ 2.19
TMEM54-204ENST00000474144 SBNO1A3KN83 1393 aa28.73■■■□□ 2.19
TMEM54-204ENST00000474144 PLEKHG5O94827 1062 aa28.72■■■□□ 2.19
TMEM54-204ENST00000474144 RBM6P78332 1123 aaKnown RBP28.71■■■□□ 2.19
TMEM54-204ENST00000474144 CABLES1Q8TDN4 633 aa28.71■■■□□ 2.19
TMEM54-204ENST00000474144 CDK12Q9NYV4 1490 aaPredicted RBP28.71■■■□□ 2.19
TMEM54-204ENST00000474144 LMOD2Q6P5Q4 547 aa28.7■■■□□ 2.18
TMEM54-204ENST00000474144 TRPM3Q9HCF6 1732 aaPredicted RBP28.69■■■□□ 2.18
TMEM54-204ENST00000474144 CDK19Q9BWU1 502 aa28.69■■■□□ 2.18
TMEM54-204ENST00000474144 RGS12O14924 1447 aa28.69■■■□□ 2.18
TMEM54-204ENST00000474144 ATP7BP35670 1465 aa28.68■■■□□ 2.18
TMEM54-204ENST00000474144 NUDT16Q96DE0 195 aaKnown RBP28.68■■■□□ 2.18
TMEM54-204ENST00000474144 BCL9LQ86UU0 1499 aa28.67■■■□□ 2.18
TMEM54-204ENST00000474144 TRPC5Q9UL62 973 aaPredicted RBP28.67■■■□□ 2.18
TMEM54-204ENST00000474144 ATRNO75882 1429 aa28.66■■■□□ 2.18
TMEM54-204ENST00000474144 ABCA3Q99758 1704 aa28.65■■■□□ 2.18
TMEM54-204ENST00000474144 ARHGEF10O15013 1369 aa28.64■■■□□ 2.18
TMEM54-204ENST00000474144 GPRASP1Q5JY77 1395 aa28.64■■■□□ 2.18
TMEM54-204ENST00000474144 ITSN1Q15811 1721 aa28.64■■■□□ 2.18
TMEM54-204ENST00000474144 TRIM26Q12899 539 aaPredicted RBP28.64■■■□□ 2.18
TMEM54-204ENST00000474144 NGDNQ8NEJ9 315 aaKnown RBP28.64■■■□□ 2.18
TMEM54-204ENST00000474144 TRPM1Q7Z4N2 1603 aa28.64■■■□□ 2.18
TMEM54-204ENST00000474144 HAP1P54257 671 aaPredicted RBP28.63■■■□□ 2.17
TMEM54-204ENST00000474144 ALS2Q96Q42 1657 aa28.62■■■□□ 2.17
TMEM54-204ENST00000474144 CENPJQ9HC77 1338 aaPredicted RBP28.62■■■□□ 2.17
TMEM54-204ENST00000474144 SLIT2O94813 1529 aa28.6■■■□□ 2.17
TMEM54-204ENST00000474144 UPF1Q92900 1129 aaKnown RBP eCLIP28.6■■■□□ 2.17
TMEM54-204ENST00000474144 TOPAZ1Q8N9V7 1692 aa28.6■■■□□ 2.17
TMEM54-204ENST00000474144 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
TMEM54-204ENST00000474144 PAK3O75914 559 aaPredicted RBP28.57■■■□□ 2.16
TMEM54-204ENST00000474144 NBPF8Q3BBV2 869 aa28.57■■■□□ 2.16
TMEM54-204ENST00000474144 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.57■■■□□ 2.16
TMEM54-204ENST00000474144 UNC5CLQ8IV45 518 aa28.56■■■□□ 2.16
TMEM54-204ENST00000474144 CCDC61Q9Y6R9 512 aa28.55■■■□□ 2.16
TMEM54-204ENST00000474144 ROCK2O75116 1388 aaKnown RBP28.54■■■□□ 2.16
TMEM54-204ENST00000474144 GJD4Q96KN9 370 aaPredicted RBP28.54■■■□□ 2.16
TMEM54-204ENST00000474144 CABP2Q9NPB3 220 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms