RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
C9orf85-204ENST00000473252 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
C9orf85-204ENST00000473252 CDC42BPGQ6DT37 1551 aa18.45■□□□□ 0.54
C9orf85-204ENST00000473252 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
C9orf85-204ENST00000473252 JCADQ9P266 1359 aa18.44■□□□□ 0.54
C9orf85-204ENST00000473252 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
C9orf85-204ENST00000473252 STK26Q9P289 416 aa18.43■□□□□ 0.54
C9orf85-204ENST00000473252 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
C9orf85-204ENST00000473252 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
C9orf85-204ENST00000473252 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
C9orf85-204ENST00000473252 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
C9orf85-204ENST00000473252 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
C9orf85-204ENST00000473252 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
C9orf85-204ENST00000473252 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
C9orf85-204ENST00000473252 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
C9orf85-204ENST00000473252 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
C9orf85-204ENST00000473252 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
C9orf85-204ENST00000473252 FMN2Q9NZ56 1722 aa18.37■□□□□ 0.53
C9orf85-204ENST00000473252 PLEKHH1Q9ULM0 1364 aa18.35■□□□□ 0.53
C9orf85-204ENST00000473252 ILDR2Q71H61 639 aa18.33■□□□□ 0.52
C9orf85-204ENST00000473252 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
C9orf85-204ENST00000473252 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
C9orf85-204ENST00000473252 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
C9orf85-204ENST00000473252 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
C9orf85-204ENST00000473252 POGKQ9P215 609 aa18.32■□□□□ 0.52
C9orf85-204ENST00000473252 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
C9orf85-204ENST00000473252 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
C9orf85-204ENST00000473252 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
C9orf85-204ENST00000473252 NPHP3Q7Z494 1330 aa18.3■□□□□ 0.52
C9orf85-204ENST00000473252 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
C9orf85-204ENST00000473252 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
C9orf85-204ENST00000473252 RGPD8O14715 1765 aaPredicted RBP18.28■□□□□ 0.52
C9orf85-204ENST00000473252 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
C9orf85-204ENST00000473252 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.52
C9orf85-204ENST00000473252 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
C9orf85-204ENST00000473252 L3MBTL2Q969R5 705 aa18.26■□□□□ 0.51
C9orf85-204ENST00000473252 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
C9orf85-204ENST00000473252 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
C9orf85-204ENST00000473252 RGS17Q9UGC6 210 aaPredicted RBP18.25■□□□□ 0.51
C9orf85-204ENST00000473252 PNPLA6Q8IY17 1366 aa18.25■□□□□ 0.51
C9orf85-204ENST00000473252 LRP6O75581 1613 aa18.24■□□□□ 0.51
C9orf85-204ENST00000473252 COL22A1Q8NFW1 1626 aaPredicted RBP18.24■□□□□ 0.51
C9orf85-204ENST00000473252 SOCS7O14512 581 aa18.24■□□□□ 0.51
C9orf85-204ENST00000473252 SAFB2Q14151 953 aaKnown RBP eCLIP18.24■□□□□ 0.51
C9orf85-204ENST00000473252 PXDNQ92626 1479 aa18.23■□□□□ 0.51
C9orf85-204ENST00000473252 FOXO3O43524 673 aa18.23■□□□□ 0.51
C9orf85-204ENST00000473252 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
C9orf85-204ENST00000473252 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
C9orf85-204ENST00000473252 MEX3CQ5U5Q3 659 aaKnown RBP18.22■□□□□ 0.51
C9orf85-204ENST00000473252 TRPM1Q7Z4N2 1603 aa18.21■□□□□ 0.51
C9orf85-204ENST00000473252 USP32Q8NFA0 1604 aa18.21■□□□□ 0.51
C9orf85-204ENST00000473252 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
C9orf85-204ENST00000473252 PHF8Q9UPP1 1060 aa18.21■□□□□ 0.51
C9orf85-204ENST00000473252 TULP4Q9NRJ4 1543 aa18.21■□□□□ 0.51
C9orf85-204ENST00000473252 ZNF772Q68DY9 489 aaPredicted RBP18.2■□□□□ 0.5
C9orf85-204ENST00000473252 ITSN1Q15811 1721 aa18.2■□□□□ 0.5
C9orf85-204ENST00000473252 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
C9orf85-204ENST00000473252 PSME1Q06323 249 aa18.19■□□□□ 0.5
C9orf85-204ENST00000473252 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
C9orf85-204ENST00000473252 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
C9orf85-204ENST00000473252 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
C9orf85-204ENST00000473252 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
C9orf85-204ENST00000473252 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
C9orf85-204ENST00000473252 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
C9orf85-204ENST00000473252 SPATA31A3Q5VYP0 1347 aa18.16■□□□□ 0.5
C9orf85-204ENST00000473252 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
C9orf85-204ENST00000473252 MARF1Q9Y4F3 1742 aaKnown RBP18.15■□□□□ 0.5
C9orf85-204ENST00000473252 POTEAQ6S8J7 498 aa18.15■□□□□ 0.5
C9orf85-204ENST00000473252 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
C9orf85-204ENST00000473252 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
C9orf85-204ENST00000473252 PRR36Q9H6K5 1346 aa18.13■□□□□ 0.49
C9orf85-204ENST00000473252 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
C9orf85-204ENST00000473252 XPCQ01831 940 aaPredicted RBP18.12■□□□□ 0.49
C9orf85-204ENST00000473252 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
C9orf85-204ENST00000473252 ROCK2O75116 1388 aaKnown RBP18.12■□□□□ 0.49
C9orf85-204ENST00000473252 TNS3Q68CZ2 1445 aa18.12■□□□□ 0.49
C9orf85-204ENST00000473252 ATP7BP35670 1465 aa18.12■□□□□ 0.49
C9orf85-204ENST00000473252 PMFBP1Q8TBY8 1022 aa18.11■□□□□ 0.49
C9orf85-204ENST00000473252 NUDT16Q96DE0 195 aaKnown RBP18.11■□□□□ 0.49
C9orf85-204ENST00000473252 ARHGEF10O15013 1369 aa18.11■□□□□ 0.49
C9orf85-204ENST00000473252 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
C9orf85-204ENST00000473252 TRPM3Q9HCF6 1732 aaPredicted RBP18.1■□□□□ 0.49
C9orf85-204ENST00000473252 TOPAZ1Q8N9V7 1692 aa18.1■□□□□ 0.49
C9orf85-204ENST00000473252 AFF2P51816 1311 aa18.1■□□□□ 0.49
C9orf85-204ENST00000473252 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
C9orf85-204ENST00000473252 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
C9orf85-204ENST00000473252 C8orf37Q96NL8 207 aa18.09■□□□□ 0.49
C9orf85-204ENST00000473252 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
C9orf85-204ENST00000473252 NBPF8Q3BBV2 869 aa18.08■□□□□ 0.48
C9orf85-204ENST00000473252 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
C9orf85-204ENST00000473252 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
C9orf85-204ENST00000473252 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
C9orf85-204ENST00000473252 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
C9orf85-204ENST00000473252 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
C9orf85-204ENST00000473252 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
C9orf85-204ENST00000473252 CDK12Q9NYV4 1490 aaPredicted RBP18.06■□□□□ 0.48
C9orf85-204ENST00000473252 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
C9orf85-204ENST00000473252 RXRBP28702 533 aa18.05■□□□□ 0.48
C9orf85-204ENST00000473252 EVC2Q86UK5 1308 aa18.04■□□□□ 0.48
C9orf85-204ENST00000473252 TIMELESSQ9UNS1 1208 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms