RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 POTEAQ6S8J7 498 aa30.47■■■□□ 2.47
EPHB3-202ENST00000473079 ORAI2Q96SN7 254 aa30.47■■■□□ 2.47
EPHB3-202ENST00000473079 KNDC1Q76NI1 1749 aa30.47■■■□□ 2.47
EPHB3-202ENST00000473079 LRP6O75581 1613 aa30.47■■■□□ 2.47
EPHB3-202ENST00000473079 STAC3Q96MF2 364 aa30.46■■■□□ 2.47
EPHB3-202ENST00000473079 LAMC1P11047 1609 aa30.46■■■□□ 2.47
EPHB3-202ENST00000473079 DHX57Q6P158 1386 aaKnown RBP30.45■■■□□ 2.47
EPHB3-202ENST00000473079 DDX17Q92841 729 aaKnown RBP30.45■■■□□ 2.47
EPHB3-202ENST00000473079 SOS2Q07890 1332 aaPredicted RBP30.42■■■□□ 2.46
EPHB3-202ENST00000473079 PLEKHH1Q9ULM0 1364 aa30.41■■■□□ 2.46
EPHB3-202ENST00000473079 MEX3CQ5U5Q3 659 aaKnown RBP30.4■■■□□ 2.46
EPHB3-202ENST00000473079 DCAF11Q8TEB1 546 aa30.38■■■□□ 2.45
EPHB3-202ENST00000473079 PNPLA6Q8IY17 1366 aa30.38■■■□□ 2.45
EPHB3-202ENST00000473079 ESCO1Q5FWF5 840 aa30.37■■■□□ 2.45
EPHB3-202ENST00000473079 NUTM2BA6NNL0 878 aaPredicted RBP30.35■■■□□ 2.45
EPHB3-202ENST00000473079 NUTM2EB1AL46 878 aaPredicted RBP30.35■■■□□ 2.45
EPHB3-202ENST00000473079 ZNF772Q68DY9 489 aaPredicted RBP30.35■■■□□ 2.45
EPHB3-202ENST00000473079 NUTM2AQ8IVF1 878 aaPredicted RBP30.35■■■□□ 2.45
EPHB3-202ENST00000473079 KDM2AQ9Y2K7 1162 aa30.34■■■□□ 2.45
EPHB3-202ENST00000473079 NPHP3Q7Z494 1330 aa30.33■■■□□ 2.45
EPHB3-202ENST00000473079 ADGRB1O14514 1584 aa30.32■■■□□ 2.45
EPHB3-202ENST00000473079 DLC1Q96QB1 1528 aa30.32■■■□□ 2.44
EPHB3-202ENST00000473079 PRAM1Q96QH2 718 aa30.3■■■□□ 2.44
EPHB3-202ENST00000473079 NUTM2FA1L443 756 aa30.28■■■□□ 2.44
EPHB3-202ENST00000473079 FMN2Q9NZ56 1722 aa30.27■■■□□ 2.44
EPHB3-202ENST00000473079 FOXO3O43524 673 aa30.27■■■□□ 2.44
EPHB3-202ENST00000473079 PXDNQ92626 1479 aa30.25■■■□□ 2.43
EPHB3-202ENST00000473079 POGKQ9P215 609 aa30.25■■■□□ 2.43
EPHB3-202ENST00000473079 TRAK1Q9UPV9 953 aa30.22■■■□□ 2.43
EPHB3-202ENST00000473079 AFF2P51816 1311 aa30.22■■■□□ 2.43
EPHB3-202ENST00000473079 SAFB2Q14151 953 aaKnown RBP eCLIP30.21■■■□□ 2.43
EPHB3-202ENST00000473079 COL22A1Q8NFW1 1626 aaPredicted RBP30.19■■■□□ 2.42
EPHB3-202ENST00000473079 C8orf37Q96NL8 207 aa30.19■■■□□ 2.42
EPHB3-202ENST00000473079 KIF1AQ12756 1690 aa30.17■■■□□ 2.42
EPHB3-202ENST00000473079 XPCQ01831 940 aaPredicted RBP30.17■■■□□ 2.42
EPHB3-202ENST00000473079 PHF8Q9UPP1 1060 aa30.17■■■□□ 2.42
EPHB3-202ENST00000473079 ADGRB2O60241 1585 aa30.16■■■□□ 2.42
EPHB3-202ENST00000473079 ADAMTS2O95450 1211 aa30.16■■■□□ 2.42
EPHB3-202ENST00000473079 RXRBP28702 533 aa30.16■■■□□ 2.42
EPHB3-202ENST00000473079 ANKARQ7Z5J8 1434 aa30.15■■■□□ 2.42
EPHB3-202ENST00000473079 NGLY1Q96IV0 654 aa30.14■■■□□ 2.42
EPHB3-202ENST00000473079 KRT28Q7Z3Y7 464 aa30.13■■■□□ 2.41
EPHB3-202ENST00000473079 SPATA31A3Q5VYP0 1347 aa30.13■■■□□ 2.41
EPHB3-202ENST00000473079 PSME1Q06323 249 aa30.1■■■□□ 2.41
EPHB3-202ENST00000473079 QTRT2Q9H974 415 aaKnown RBP30.1■■■□□ 2.41
EPHB3-202ENST00000473079 CDK12Q9NYV4 1490 aaPredicted RBP30.1■■■□□ 2.41
EPHB3-202ENST00000473079 EIF3AQ14152 1382 aaKnown RBP30.09■■■□□ 2.41
EPHB3-202ENST00000473079 FNBP4Q8N3X1 1017 aaPredicted RBP30.09■■■□□ 2.41
EPHB3-202ENST00000473079 MINK1Q8N4C8 1332 aaPredicted RBP30.09■■■□□ 2.41
EPHB3-202ENST00000473079 HIRIP3Q9BW71 556 aaPredicted RBP30.09■■■□□ 2.41
EPHB3-202ENST00000473079 WASLO00401 505 aaPredicted RBP30.08■■■□□ 2.41
EPHB3-202ENST00000473079 RGPD8O14715 1765 aaPredicted RBP30.08■■■□□ 2.41
EPHB3-202ENST00000473079 KIAA1210Q9ULL0 1709 aa30.08■■■□□ 2.41
EPHB3-202ENST00000473079 USP32Q8NFA0 1604 aa30.07■■■□□ 2.4
EPHB3-202ENST00000473079 RBM6P78332 1123 aaKnown RBP30.06■■■□□ 2.4
EPHB3-202ENST00000473079 SBNO1A3KN83 1393 aa30.04■■■□□ 2.4
EPHB3-202ENST00000473079 USP21Q9UK80 565 aa30.04■■■□□ 2.4
EPHB3-202ENST00000473079 ARHGEF28Q8N1W1 1705 aaKnown RBP30.02■■■□□ 2.4
EPHB3-202ENST00000473079 TULP4Q9NRJ4 1543 aa30.02■■■□□ 2.4
EPHB3-202ENST00000473079 PRR36Q9H6K5 1346 aa30.02■■■□□ 2.4
EPHB3-202ENST00000473079 PMFBP1Q8TBY8 1022 aa30.02■■■□□ 2.4
EPHB3-202ENST00000473079 TNS3Q68CZ2 1445 aa30.02■■■□□ 2.4
EPHB3-202ENST00000473079 NBPF1Q3BBV0 1214 aa30■■■□□ 2.39
EPHB3-202ENST00000473079 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
EPHB3-202ENST00000473079 TRPC5Q9UL62 973 aaPredicted RBP29.99■■■□□ 2.39
EPHB3-202ENST00000473079 SIN3AQ96ST3 1273 aa29.97■■■□□ 2.39
EPHB3-202ENST00000473079 ARHGEF10O15013 1369 aa29.97■■■□□ 2.39
EPHB3-202ENST00000473079 BCL9LQ86UU0 1499 aa29.95■■■□□ 2.39
EPHB3-202ENST00000473079 MARF1Q9Y4F3 1742 aaKnown RBP29.95■■■□□ 2.38
EPHB3-202ENST00000473079 ATRNO75882 1429 aa29.95■■■□□ 2.38
EPHB3-202ENST00000473079 GPRASP1Q5JY77 1395 aa29.93■■■□□ 2.38
EPHB3-202ENST00000473079 NUDT16Q96DE0 195 aaKnown RBP29.93■■■□□ 2.38
EPHB3-202ENST00000473079 RGS12O14924 1447 aa29.92■■■□□ 2.38
EPHB3-202ENST00000473079 CDK19Q9BWU1 502 aa29.92■■■□□ 2.38
EPHB3-202ENST00000473079 ATP7BP35670 1465 aa29.91■■■□□ 2.38
EPHB3-202ENST00000473079 NGDNQ8NEJ9 315 aaKnown RBP29.9■■■□□ 2.38
EPHB3-202ENST00000473079 UPF1Q92900 1129 aaKnown RBP eCLIP29.9■■■□□ 2.38
EPHB3-202ENST00000473079 NEUROD1Q13562 356 aa29.89■■■□□ 2.38
EPHB3-202ENST00000473079 LMOD2Q6P5Q4 547 aa29.89■■■□□ 2.38
EPHB3-202ENST00000473079 SLIT2O94813 1529 aa29.88■■■□□ 2.37
EPHB3-202ENST00000473079 CABLES1Q8TDN4 633 aa29.88■■■□□ 2.37
EPHB3-202ENST00000473079 TRPM3Q9HCF6 1732 aaPredicted RBP29.88■■■□□ 2.37
EPHB3-202ENST00000473079 HAP1P54257 671 aaPredicted RBP29.87■■■□□ 2.37
EPHB3-202ENST00000473079 UNC5CLQ8IV45 518 aa29.86■■■□□ 2.37
EPHB3-202ENST00000473079 CCDC61Q9Y6R9 512 aa29.86■■■□□ 2.37
EPHB3-202ENST00000473079 CENPJQ9HC77 1338 aaPredicted RBP29.86■■■□□ 2.37
EPHB3-202ENST00000473079 ITSN1Q15811 1721 aa29.84■■■□□ 2.37
EPHB3-202ENST00000473079 TRIM26Q12899 539 aaPredicted RBP29.83■■■□□ 2.37
EPHB3-202ENST00000473079 GJD4Q96KN9 370 aaPredicted RBP29.83■■■□□ 2.37
EPHB3-202ENST00000473079 ALS2Q96Q42 1657 aa29.82■■■□□ 2.36
EPHB3-202ENST00000473079 PLEKHG3A1L390 1219 aa29.82■■■□□ 2.36
EPHB3-202ENST00000473079 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.82■■■□□ 2.36
EPHB3-202ENST00000473079 POLR3AO14802 1390 aaPredicted RBP29.81■■■□□ 2.36
EPHB3-202ENST00000473079 ABCA3Q99758 1704 aa29.79■■■□□ 2.36
EPHB3-202ENST00000473079 TRPM1Q7Z4N2 1603 aa29.78■■■□□ 2.36
EPHB3-202ENST00000473079 ACEP12821 1306 aa29.77■■■□□ 2.36
EPHB3-202ENST00000473079 PAK3O75914 559 aaPredicted RBP29.77■■■□□ 2.36
EPHB3-202ENST00000473079 PLEKHG5O94827 1062 aa29.77■■■□□ 2.36
EPHB3-202ENST00000473079 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
EPHB3-202ENST00000473079 TOPAZ1Q8N9V7 1692 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms