RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 FMN2Q9NZ56 1722 aa22.68■■□□□ 1.22
MRPL55-226ENST00000473066 WAPLQ7Z5K2 1190 aa22.66■■□□□ 1.22
MRPL55-226ENST00000473066 DLC1Q96QB1 1528 aa22.66■■□□□ 1.22
MRPL55-226ENST00000473066 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
MRPL55-226ENST00000473066 ADGRB1O14514 1584 aa22.64■■□□□ 1.22
MRPL55-226ENST00000473066 SPATA31A6Q5VVP1 1343 aa22.63■■□□□ 1.21
MRPL55-226ENST00000473066 KIAA1210Q9ULL0 1709 aa22.63■■□□□ 1.21
MRPL55-226ENST00000473066 SIRT1Q96EB6 747 aa22.62■■□□□ 1.21
MRPL55-226ENST00000473066 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
MRPL55-226ENST00000473066 POGKQ9P215 609 aa22.6■■□□□ 1.21
MRPL55-226ENST00000473066 ARHGEF28Q8N1W1 1705 aaKnown RBP22.6■■□□□ 1.21
MRPL55-226ENST00000473066 RGPD8O14715 1765 aaPredicted RBP22.59■■□□□ 1.21
MRPL55-226ENST00000473066 MEX3CQ5U5Q3 659 aaKnown RBP22.59■■□□□ 1.21
MRPL55-226ENST00000473066 LRRC59Q96AG4 307 aaKnown RBP22.59■■□□□ 1.21
MRPL55-226ENST00000473066 ORAI2Q96SN7 254 aa22.59■■□□□ 1.21
MRPL55-226ENST00000473066 PRAM1Q96QH2 718 aa22.58■■□□□ 1.21
MRPL55-226ENST00000473066 ADGRB2O60241 1585 aa22.58■■□□□ 1.2
MRPL55-226ENST00000473066 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
MRPL55-226ENST00000473066 ESCO1Q5FWF5 840 aa22.57■■□□□ 1.2
MRPL55-226ENST00000473066 DDX17Q92841 729 aaKnown RBP22.57■■□□□ 1.2
MRPL55-226ENST00000473066 LRP6O75581 1613 aa22.57■■□□□ 1.2
MRPL55-226ENST00000473066 NUTM2FA1L443 756 aa22.56■■□□□ 1.2
MRPL55-226ENST00000473066 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
MRPL55-226ENST00000473066 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
MRPL55-226ENST00000473066 NPHP3Q7Z494 1330 aa22.55■■□□□ 1.2
MRPL55-226ENST00000473066 SOCS7O14512 581 aa22.54■■□□□ 1.2
MRPL55-226ENST00000473066 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
MRPL55-226ENST00000473066 NUTM2BA6NNL0 878 aaPredicted RBP22.52■■□□□ 1.2
MRPL55-226ENST00000473066 NUTM2EB1AL46 878 aaPredicted RBP22.52■■□□□ 1.2
MRPL55-226ENST00000473066 NUTM2AQ8IVF1 878 aaPredicted RBP22.52■■□□□ 1.2
MRPL55-226ENST00000473066 SOS2Q07890 1332 aaPredicted RBP22.51■■□□□ 1.19
MRPL55-226ENST00000473066 EIF3AQ14152 1382 aaKnown RBP22.5■■□□□ 1.19
MRPL55-226ENST00000473066 ANKARQ7Z5J8 1434 aa22.48■■□□□ 1.19
MRPL55-226ENST00000473066 ITSN1Q15811 1721 aa22.48■■□□□ 1.19
MRPL55-226ENST00000473066 PXDNQ92626 1479 aa22.48■■□□□ 1.19
MRPL55-226ENST00000473066 RGS17Q9UGC6 210 aaPredicted RBP22.48■■□□□ 1.19
MRPL55-226ENST00000473066 COL22A1Q8NFW1 1626 aaPredicted RBP22.48■■□□□ 1.19
MRPL55-226ENST00000473066 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
MRPL55-226ENST00000473066 MINK1Q8N4C8 1332 aaPredicted RBP22.47■■□□□ 1.19
MRPL55-226ENST00000473066 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
MRPL55-226ENST00000473066 FOXO3O43524 673 aa22.46■■□□□ 1.19
MRPL55-226ENST00000473066 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
MRPL55-226ENST00000473066 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
MRPL55-226ENST00000473066 TULP4Q9NRJ4 1543 aa22.45■■□□□ 1.18
MRPL55-226ENST00000473066 TRPM1Q7Z4N2 1603 aa22.44■■□□□ 1.18
MRPL55-226ENST00000473066 PHF8Q9UPP1 1060 aa22.44■■□□□ 1.18
MRPL55-226ENST00000473066 XPCQ01831 940 aaPredicted RBP22.43■■□□□ 1.18
MRPL55-226ENST00000473066 ZNF772Q68DY9 489 aaPredicted RBP22.43■■□□□ 1.18
MRPL55-226ENST00000473066 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
MRPL55-226ENST00000473066 MARF1Q9Y4F3 1742 aaKnown RBP22.43■■□□□ 1.18
MRPL55-226ENST00000473066 POTEAQ6S8J7 498 aa22.41■■□□□ 1.18
MRPL55-226ENST00000473066 QRICH2Q9H0J4 1663 aa22.4■■□□□ 1.18
MRPL55-226ENST00000473066 WASLO00401 505 aaPredicted RBP22.38■■□□□ 1.17
MRPL55-226ENST00000473066 PSME1Q06323 249 aa22.38■■□□□ 1.17
MRPL55-226ENST00000473066 KRT28Q7Z3Y7 464 aa22.38■■□□□ 1.17
MRPL55-226ENST00000473066 C8orf37Q96NL8 207 aa22.38■■□□□ 1.17
MRPL55-226ENST00000473066 AFF2P51816 1311 aa22.37■■□□□ 1.17
MRPL55-226ENST00000473066 ADAMTS2O95450 1211 aa22.37■■□□□ 1.17
MRPL55-226ENST00000473066 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
MRPL55-226ENST00000473066 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
MRPL55-226ENST00000473066 TONSLQ96HA7 1378 aa22.37■■□□□ 1.17
MRPL55-226ENST00000473066 SPATA31A3Q5VYP0 1347 aa22.34■■□□□ 1.17
MRPL55-226ENST00000473066 TOPAZ1Q8N9V7 1692 aa22.34■■□□□ 1.17
MRPL55-226ENST00000473066 PMFBP1Q8TBY8 1022 aa22.34■■□□□ 1.17
MRPL55-226ENST00000473066 GPRASP1Q5JY77 1395 aa22.34■■□□□ 1.17
MRPL55-226ENST00000473066 ATP7BP35670 1465 aa22.34■■□□□ 1.17
MRPL55-226ENST00000473066 CENPJQ9HC77 1338 aaPredicted RBP22.33■■□□□ 1.17
MRPL55-226ENST00000473066 NGLY1Q96IV0 654 aa22.33■■□□□ 1.17
MRPL55-226ENST00000473066 ABCA3Q99758 1704 aa22.33■■□□□ 1.17
MRPL55-226ENST00000473066 TRPM3Q9HCF6 1732 aaPredicted RBP22.33■■□□□ 1.17
MRPL55-226ENST00000473066 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
MRPL55-226ENST00000473066 PRR36Q9H6K5 1346 aa22.32■■□□□ 1.16
MRPL55-226ENST00000473066 SBNO1A3KN83 1393 aa22.32■■□□□ 1.16
MRPL55-226ENST00000473066 ARHGEF10O15013 1369 aa22.31■■□□□ 1.16
MRPL55-226ENST00000473066 HAP1P54257 671 aaPredicted RBP22.31■■□□□ 1.16
MRPL55-226ENST00000473066 LMOD2Q6P5Q4 547 aa22.3■■□□□ 1.16
MRPL55-226ENST00000473066 NGDNQ8NEJ9 315 aaKnown RBP22.3■■□□□ 1.16
MRPL55-226ENST00000473066 ALS2Q96Q42 1657 aa22.29■■□□□ 1.16
MRPL55-226ENST00000473066 NUDT16Q96DE0 195 aaKnown RBP22.28■■□□□ 1.16
MRPL55-226ENST00000473066 CDK19Q9BWU1 502 aa22.28■■□□□ 1.16
MRPL55-226ENST00000473066 RXRBP28702 533 aa22.27■■□□□ 1.16
MRPL55-226ENST00000473066 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.26■■□□□ 1.15
MRPL55-226ENST00000473066 SRPK2P78362 688 aaKnown RBP22.25■■□□□ 1.15
MRPL55-226ENST00000473066 USP21Q9UK80 565 aa22.25■■□□□ 1.15
MRPL55-226ENST00000473066 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
MRPL55-226ENST00000473066 RALGAPBQ86X10 1494 aa22.23■■□□□ 1.15
MRPL55-226ENST00000473066 PLEKHG5O94827 1062 aa22.23■■□□□ 1.15
MRPL55-226ENST00000473066 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
MRPL55-226ENST00000473066 QTRT2Q9H974 415 aaKnown RBP22.22■■□□□ 1.15
MRPL55-226ENST00000473066 CCDC61Q9Y6R9 512 aa22.22■■□□□ 1.15
MRPL55-226ENST00000473066 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
MRPL55-226ENST00000473066 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
MRPL55-226ENST00000473066 NWD2Q9ULI1 1742 aa22.2■■□□□ 1.14
MRPL55-226ENST00000473066 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
MRPL55-226ENST00000473066 FNBP4Q8N3X1 1017 aaPredicted RBP22.2■■□□□ 1.14
MRPL55-226ENST00000473066 TRPC5Q9UL62 973 aaPredicted RBP22.2■■□□□ 1.14
MRPL55-226ENST00000473066 EVC2Q86UK5 1308 aa22.19■■□□□ 1.14
MRPL55-226ENST00000473066 PPIP5K1Q6PFW1 1433 aa22.19■■□□□ 1.14
MRPL55-226ENST00000473066 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
MRPL55-226ENST00000473066 CABLES1Q8TDN4 633 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms