RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, human

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF220-208	ENST00000471494	LRP6	O75581	1613 aa		34.26	■■■■□ 3.07
RNF220-208	ENST00000471494	DHX57	Q6P158	1386 aa	Known RBP	34.25	■■■■□ 3.07
RNF220-208	ENST00000471494	DDX17	Q92841	729 aa	Known RBP	34.24	■■■■□ 3.07
RNF220-208	ENST00000471494	PLEKHH1	Q9ULM0	1364 aa		34.23	■■■■□ 3.07
RNF220-208	ENST00000471494	ORAI2	Q96SN7	254 aa		34.22	■■■■□ 3.07
RNF220-208	ENST00000471494	DCAF11	Q8TEB1	546 aa		34.21	■■■■□ 3.07
RNF220-208	ENST00000471494	LRRC59	Q96AG4	307 aa	Known RBP	34.21	■■■■□ 3.07
RNF220-208	ENST00000471494	MEX3C	Q5U5Q3	659 aa	Known RBP	34.2	■■■■□ 3.07
RNF220-208	ENST00000471494	FMN2	Q9NZ56	1722 aa		34.2	■■■■□ 3.07
RNF220-208	ENST00000471494	KDM2A	Q9Y2K7	1162 aa		34.19	■■■■□ 3.06
RNF220-208	ENST00000471494	SIRT1	Q96EB6	747 aa		34.18	■■■■□ 3.06
RNF220-208	ENST00000471494	ADGRB1	O14514	1584 aa		34.16	■■■■□ 3.06
RNF220-208	ENST00000471494	STAC3	Q96MF2	364 aa		34.16	■■■■□ 3.06
RNF220-208	ENST00000471494	DLC1	Q96QB1	1528 aa		34.14	■■■■□ 3.06
RNF220-208	ENST00000471494	NUTM2B	A6NNL0	878 aa	Predicted RBP	34.14	■■■■□ 3.06
RNF220-208	ENST00000471494	NUTM2E	B1AL46	878 aa	Predicted RBP	34.14	■■■■□ 3.06
RNF220-208	ENST00000471494	ESCO1	Q5FWF5	840 aa		34.14	■■■■□ 3.06
RNF220-208	ENST00000471494	NUTM2A	Q8IVF1	878 aa	Predicted RBP	34.14	■■■■□ 3.06
RNF220-208	ENST00000471494	PNPLA6	Q8IY17	1366 aa		34.13	■■■■□ 3.05
RNF220-208	ENST00000471494	POTEA	Q6S8J7	498 aa		34.13	■■■■□ 3.05
RNF220-208	ENST00000471494	SOS2	Q07890	1332 aa	Predicted RBP	34.11	■■■■□ 3.05
RNF220-208	ENST00000471494	NUTM2F	A1L443	756 aa		34.11	■■■■□ 3.05
RNF220-208	ENST00000471494	PRAM1	Q96QH2	718 aa		34.09	■■■■□ 3.05
RNF220-208	ENST00000471494	KIF1A	Q12756	1690 aa		34.09	■■■■□ 3.05
RNF220-208	ENST00000471494	NPHP3	Q7Z494	1330 aa		34.08	■■■■□ 3.05
RNF220-208	ENST00000471494	RGPD8	O14715	1765 aa	Predicted RBP	34.07	■■■■□ 3.04
RNF220-208	ENST00000471494	SAFB2	Q14151	953 aa	Known RBP eCLIP	34.06	■■■■□ 3.04
RNF220-208	ENST00000471494	POGK	Q9P215	609 aa		34.06	■■■■□ 3.04
RNF220-208	ENST00000471494	PXDN	Q92626	1479 aa		34.04	■■■■□ 3.04
RNF220-208	ENST00000471494	TRAK1	Q9UPV9	953 aa		34.03	■■■■□ 3.04
RNF220-208	ENST00000471494	ADGRB2	O60241	1585 aa		34.02	■■■■□ 3.04
RNF220-208	ENST00000471494	ZNF772	Q68DY9	489 aa	Predicted RBP	34.02	■■■■□ 3.04
RNF220-208	ENST00000471494	COL22A1	Q8NFW1	1626 aa	Predicted RBP	34.01	■■■■□ 3.04
RNF220-208	ENST00000471494	FOXO3	O43524	673 aa		34.01	■■■■□ 3.03
RNF220-208	ENST00000471494	KIAA1210	Q9ULL0	1709 aa		34	■■■■□ 3.03
RNF220-208	ENST00000471494	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.99	■■■■□ 3.03
RNF220-208	ENST00000471494	XPC	Q01831	940 aa	Predicted RBP	33.96	■■■■□ 3.03
RNF220-208	ENST00000471494	AFF2	P51816	1311 aa		33.94	■■■■□ 3.02
RNF220-208	ENST00000471494	C8orf37	Q96NL8	207 aa		33.93	■■■■□ 3.02
RNF220-208	ENST00000471494	USP32	Q8NFA0	1604 aa		33.93	■■■■□ 3.02
RNF220-208	ENST00000471494	ANKAR	Q7Z5J8	1434 aa		33.92	■■■■□ 3.02
RNF220-208	ENST00000471494	ADAMTS2	O95450	1211 aa		33.91	■■■■□ 3.02
RNF220-208	ENST00000471494	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.9	■■■■□ 3.02
RNF220-208	ENST00000471494	PHF8	Q9UPP1	1060 aa		33.9	■■■■□ 3.02
RNF220-208	ENST00000471494	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.89	■■■■□ 3.02
RNF220-208	ENST00000471494	EIF3A	Q14152	1382 aa	Known RBP	33.88	■■■■□ 3.01
RNF220-208	ENST00000471494	MARF1	Q9Y4F3	1742 aa	Known RBP	33.87	■■■■□ 3.01
RNF220-208	ENST00000471494	TULP4	Q9NRJ4	1543 aa		33.85	■■■■□ 3.01
RNF220-208	ENST00000471494	NGLY1	Q96IV0	654 aa		33.85	■■■■□ 3.01
RNF220-208	ENST00000471494	KRT28	Q7Z3Y7	464 aa		33.84	■■■■□ 3.01
RNF220-208	ENST00000471494	SPATA31A3	Q5VYP0	1347 aa		33.82	■■■■□ 3.01
RNF220-208	ENST00000471494	RXRB	P28702	533 aa		33.81	■■■■□ 3
RNF220-208	ENST00000471494	ITSN1	Q15811	1721 aa		33.8	■■■■□ 3
RNF220-208	ENST00000471494	WASL	O00401	505 aa	Predicted RBP	33.8	■■■■□ 3
RNF220-208	ENST00000471494	PSME1	Q06323	249 aa		33.8	■■■■□ 3
RNF220-208	ENST00000471494	TNS3	Q68CZ2	1445 aa		33.79	■■■■□ 3
RNF220-208	ENST00000471494	SIN3A	Q96ST3	1273 aa		33.78	■■■■□ 3
RNF220-208	ENST00000471494	PMFBP1	Q8TBY8	1022 aa		33.77	■■■■□ 3
RNF220-208	ENST00000471494	L3MBTL2	Q969R5	705 aa		33.77	■■■■□ 3
RNF220-208	ENST00000471494	NBPF1	Q3BBV0	1214 aa		33.76	■■■□□ 2.99
RNF220-208	ENST00000471494	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.76	■■■□□ 2.99
RNF220-208	ENST00000471494	PRR36	Q9H6K5	1346 aa		33.75	■■■□□ 2.99
RNF220-208	ENST00000471494	SBNO1	A3KN83	1393 aa		33.74	■■■□□ 2.99
RNF220-208	ENST00000471494	NEUROD1	Q13562	356 aa		33.74	■■■□□ 2.99
RNF220-208	ENST00000471494	QTRT2	Q9H974	415 aa	Known RBP	33.74	■■■□□ 2.99
RNF220-208	ENST00000471494	USP21	Q9UK80	565 aa		33.72	■■■□□ 2.99
RNF220-208	ENST00000471494	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.72	■■■□□ 2.99
RNF220-208	ENST00000471494	TRPM1	Q7Z4N2	1603 aa		33.71	■■■□□ 2.99
RNF220-208	ENST00000471494	ABCA3	Q99758	1704 aa		33.7	■■■□□ 2.99
RNF220-208	ENST00000471494	ATP7B	P35670	1465 aa		33.7	■■■□□ 2.99
RNF220-208	ENST00000471494	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.7	■■■□□ 2.99
RNF220-208	ENST00000471494	ARHGEF10	O15013	1369 aa		33.7	■■■□□ 2.98
RNF220-208	ENST00000471494	GPRASP1	Q5JY77	1395 aa		33.7	■■■□□ 2.98
RNF220-208	ENST00000471494	RBM6	P78332	1123 aa	Known RBP	33.69	■■■□□ 2.98
RNF220-208	ENST00000471494	TRIM26	Q12899	539 aa	Predicted RBP	33.68	■■■□□ 2.98
RNF220-208	ENST00000471494	LMOD2	Q6P5Q4	547 aa		33.68	■■■□□ 2.98
RNF220-208	ENST00000471494	QRICH2	Q9H0J4	1663 aa		33.68	■■■□□ 2.98
RNF220-208	ENST00000471494	HAP1	P54257	671 aa	Predicted RBP	33.66	■■■□□ 2.98
RNF220-208	ENST00000471494	TOPAZ1	Q8N9V7	1692 aa		33.66	■■■□□ 2.98
RNF220-208	ENST00000471494	ALS2	Q96Q42	1657 aa		33.65	■■■□□ 2.98
RNF220-208	ENST00000471494	TRPC5	Q9UL62	973 aa	Predicted RBP	33.65	■■■□□ 2.98
RNF220-208	ENST00000471494	NGDN	Q8NEJ9	315 aa	Known RBP	33.64	■■■□□ 2.98
RNF220-208	ENST00000471494	NUDT16	Q96DE0	195 aa	Known RBP	33.64	■■■□□ 2.98
RNF220-208	ENST00000471494	CDK19	Q9BWU1	502 aa		33.64	■■■□□ 2.98
RNF220-208	ENST00000471494	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.64	■■■□□ 2.98
RNF220-208	ENST00000471494	RGS12	O14924	1447 aa		33.63	■■■□□ 2.97
RNF220-208	ENST00000471494	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.63	■■■□□ 2.97
RNF220-208	ENST00000471494	ATRN	O75882	1429 aa		33.62	■■■□□ 2.97
RNF220-208	ENST00000471494	PLEKHG5	O94827	1062 aa		33.61	■■■□□ 2.97
RNF220-208	ENST00000471494	CABLES1	Q8TDN4	633 aa		33.6	■■■□□ 2.97
RNF220-208	ENST00000471494	BCL9L	Q86UU0	1499 aa		33.6	■■■□□ 2.97
RNF220-208	ENST00000471494	PLCH1	Q4KWH8	1693 aa		33.57	■■■□□ 2.96
RNF220-208	ENST00000471494	SLIT2	O94813	1529 aa		33.56	■■■□□ 2.96
RNF220-208	ENST00000471494	ROCK2	O75116	1388 aa	Known RBP	33.56	■■■□□ 2.96
RNF220-208	ENST00000471494	NWD2	Q9ULI1	1742 aa		33.55	■■■□□ 2.96
RNF220-208	ENST00000471494	PAK3	O75914	559 aa	Predicted RBP	33.53	■■■□□ 2.96
RNF220-208	ENST00000471494	CCDC61	Q9Y6R9	512 aa		33.53	■■■□□ 2.96
RNF220-208	ENST00000471494	SRPK2	P78362	688 aa	Known RBP	33.52	■■■□□ 2.96
RNF220-208	ENST00000471494	CRYBG1	Q9Y4K1	1723 aa		33.52	■■■□□ 2.96
RNF220-208	ENST00000471494	TONSL	Q96HA7	1378 aa		33.5	■■■□□ 2.95

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