RNA–Protein interactions for RNA: ENST00000470742.5

ITSN1-224, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 474 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-224ENST00000470742 C1orf167Q5SNV9 1468 aa29.36■■■□□ 2.29
ITSN1-224ENST00000470742 DLC1Q96QB1 1528 aa29.35■■■□□ 2.29
ITSN1-224ENST00000470742 MED1Q15648 1581 aaPredicted RBP29.35■■■□□ 2.29
ITSN1-224ENST00000470742 COL16A1Q07092 1604 aaPredicted RBP29.35■■■□□ 2.29
ITSN1-224ENST00000470742 NHSL1Q5SYE7 1610 aa29.32■■■□□ 2.28
ITSN1-224ENST00000470742 L3MBTL2Q969R5 705 aa29.32■■■□□ 2.28
ITSN1-224ENST00000470742 PRAM1Q96QH2 718 aa29.32■■■□□ 2.28
ITSN1-224ENST00000470742 TRAK1Q9UPV9 953 aa29.32■■■□□ 2.28
ITSN1-224ENST00000470742 POGKQ9P215 609 aa29.3■■■□□ 2.28
ITSN1-224ENST00000470742 SAFB2Q14151 953 aaKnown RBP eCLIP29.29■■■□□ 2.28
ITSN1-224ENST00000470742 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
ITSN1-224ENST00000470742 ORAI2Q96SN7 254 aa29.27■■■□□ 2.28
ITSN1-224ENST00000470742 JCADQ9P266 1359 aa29.26■■■□□ 2.28
ITSN1-224ENST00000470742 ARHGEF28Q8N1W1 1705 aaKnown RBP29.26■■■□□ 2.27
ITSN1-224ENST00000470742 RGPD8O14715 1765 aaPredicted RBP29.25■■■□□ 2.27
ITSN1-224ENST00000470742 NUTM2FA1L443 756 aa29.24■■■□□ 2.27
ITSN1-224ENST00000470742 DDX17Q92841 729 aaKnown RBP29.23■■■□□ 2.27
ITSN1-224ENST00000470742 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
ITSN1-224ENST00000470742 SHPRHQ149N8 1683 aa29.21■■■□□ 2.27
ITSN1-224ENST00000470742 NBPF1Q3BBV0 1214 aa29.21■■■□□ 2.27
ITSN1-224ENST00000470742 PCGF6Q9BYE7 350 aa29.2■■■□□ 2.26
ITSN1-224ENST00000470742 ADGRB2O60241 1585 aa29.19■■■□□ 2.26
ITSN1-224ENST00000470742 PHF23Q9BUL5 403 aaPredicted RBP29.18■■■□□ 2.26
ITSN1-224ENST00000470742 MINK1Q8N4C8 1332 aaPredicted RBP29.17■■■□□ 2.26
ITSN1-224ENST00000470742 TRPM1Q7Z4N2 1603 aa29.16■■■□□ 2.26
ITSN1-224ENST00000470742 LRRC59Q96AG4 307 aaKnown RBP29.16■■■□□ 2.26
ITSN1-224ENST00000470742 HIRIP3Q9BW71 556 aaPredicted RBP29.15■■■□□ 2.26
ITSN1-224ENST00000470742 KIF1AQ12756 1690 aa29.14■■■□□ 2.26
ITSN1-224ENST00000470742 TONSLQ96HA7 1378 aa29.13■■■□□ 2.25
ITSN1-224ENST00000470742 SPATA31A6Q5VVP1 1343 aa29.13■■■□□ 2.25
ITSN1-224ENST00000470742 SOS2Q07890 1332 aaPredicted RBP29.12■■■□□ 2.25
ITSN1-224ENST00000470742 NPHP3Q7Z494 1330 aa29.11■■■□□ 2.25
ITSN1-224ENST00000470742 FOXO3O43524 673 aa29.1■■■□□ 2.25
ITSN1-224ENST00000470742 USP32Q8NFA0 1604 aa29.09■■■□□ 2.25
ITSN1-224ENST00000470742 ILDR2Q71H61 639 aa29.08■■■□□ 2.25
ITSN1-224ENST00000470742 ANKARQ7Z5J8 1434 aa29.08■■■□□ 2.25
ITSN1-224ENST00000470742 WASLO00401 505 aaPredicted RBP29.07■■■□□ 2.24
ITSN1-224ENST00000470742 EIF3AQ14152 1382 aaKnown RBP29.06■■■□□ 2.24
ITSN1-224ENST00000470742 PNPLA6Q8IY17 1366 aa29.06■■■□□ 2.24
ITSN1-224ENST00000470742 NBPF8Q3BBV2 869 aa29.06■■■□□ 2.24
ITSN1-224ENST00000470742 PHF8Q9UPP1 1060 aa29.06■■■□□ 2.24
ITSN1-224ENST00000470742 LRP6O75581 1613 aa29.05■■■□□ 2.24
ITSN1-224ENST00000470742 PXDNQ92626 1479 aa29.05■■■□□ 2.24
ITSN1-224ENST00000470742 XPCQ01831 940 aaPredicted RBP29.05■■■□□ 2.24
ITSN1-224ENST00000470742 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
ITSN1-224ENST00000470742 ROCK2O75116 1388 aaKnown RBP29.04■■■□□ 2.24
ITSN1-224ENST00000470742 NUTM2BA6NNL0 878 aaPredicted RBP29.03■■■□□ 2.24
ITSN1-224ENST00000470742 NUTM2EB1AL46 878 aaPredicted RBP29.03■■■□□ 2.24
ITSN1-224ENST00000470742 NUTM2AQ8IVF1 878 aaPredicted RBP29.03■■■□□ 2.24
ITSN1-224ENST00000470742 QRICH2Q9H0J4 1663 aa29.02■■■□□ 2.24
ITSN1-224ENST00000470742 MEX3CQ5U5Q3 659 aaKnown RBP29.02■■■□□ 2.24
ITSN1-224ENST00000470742 CENPJQ9HC77 1338 aaPredicted RBP29.01■■■□□ 2.23
ITSN1-224ENST00000470742 ITSN1Q15811 1721 aa29■■■□□ 2.23
ITSN1-224ENST00000470742 PRR36Q9H6K5 1346 aa28.99■■■□□ 2.23
ITSN1-224ENST00000470742 RGS17Q9UGC6 210 aaPredicted RBP28.99■■■□□ 2.23
ITSN1-224ENST00000470742 PMFBP1Q8TBY8 1022 aa28.98■■■□□ 2.23
ITSN1-224ENST00000470742 KRT28Q7Z3Y7 464 aa28.97■■■□□ 2.23
ITSN1-224ENST00000470742 CDK19Q9BWU1 502 aa28.97■■■□□ 2.23
ITSN1-224ENST00000470742 COL22A1Q8NFW1 1626 aaPredicted RBP28.97■■■□□ 2.23
ITSN1-224ENST00000470742 GPRASP1Q5JY77 1395 aa28.94■■■□□ 2.22
ITSN1-224ENST00000470742 PSME1Q06323 249 aa28.94■■■□□ 2.22
ITSN1-224ENST00000470742 NUDT16Q96DE0 195 aaKnown RBP28.94■■■□□ 2.22
ITSN1-224ENST00000470742 ATP7BP35670 1465 aa28.93■■■□□ 2.22
ITSN1-224ENST00000470742 RALGAPBQ86X10 1494 aa28.93■■■□□ 2.22
ITSN1-224ENST00000470742 CLSPNQ9HAW4 1339 aa28.92■■■□□ 2.22
ITSN1-224ENST00000470742 SPATA31A3Q5VYP0 1347 aa28.91■■■□□ 2.22
ITSN1-224ENST00000470742 TOPAZ1Q8N9V7 1692 aa28.9■■■□□ 2.22
ITSN1-224ENST00000470742 CARD11Q9BXL7 1154 aa28.9■■■□□ 2.22
ITSN1-224ENST00000470742 SBNO1A3KN83 1393 aa28.88■■■□□ 2.21
ITSN1-224ENST00000470742 SRPK2P78362 688 aaKnown RBP28.87■■■□□ 2.21
ITSN1-224ENST00000470742 NGDNQ8NEJ9 315 aaKnown RBP28.87■■■□□ 2.21
ITSN1-224ENST00000470742 TNS3Q68CZ2 1445 aa28.86■■■□□ 2.21
ITSN1-224ENST00000470742 TRPM3Q9HCF6 1732 aaPredicted RBP28.86■■■□□ 2.21
ITSN1-224ENST00000470742 ADAMTS2O95450 1211 aa28.86■■■□□ 2.21
ITSN1-224ENST00000470742 POTEAQ6S8J7 498 aa28.86■■■□□ 2.21
ITSN1-224ENST00000470742 MARF1Q9Y4F3 1742 aaKnown RBP28.86■■■□□ 2.21
ITSN1-224ENST00000470742 CCDC61Q9Y6R9 512 aa28.85■■■□□ 2.21
ITSN1-224ENST00000470742 C8orf37Q96NL8 207 aa28.84■■■□□ 2.21
ITSN1-224ENST00000470742 CABP2Q9NPB3 220 aa28.84■■■□□ 2.21
ITSN1-224ENST00000470742 ZNF772Q68DY9 489 aaPredicted RBP28.83■■■□□ 2.21
ITSN1-224ENST00000470742 CCER1Q8TC90 406 aaPredicted RBP28.83■■■□□ 2.21
ITSN1-224ENST00000470742 LMOD2Q6P5Q4 547 aa28.82■■■□□ 2.2
ITSN1-224ENST00000470742 EVC2Q86UK5 1308 aa28.82■■■□□ 2.2
ITSN1-224ENST00000470742 AFF2P51816 1311 aa28.81■■■□□ 2.2
ITSN1-224ENST00000470742 ARHGEF10O15013 1369 aa28.8■■■□□ 2.2
ITSN1-224ENST00000470742 TIMELESSQ9UNS1 1208 aa28.8■■■□□ 2.2
ITSN1-224ENST00000470742 ALS2Q96Q42 1657 aa28.8■■■□□ 2.2
ITSN1-224ENST00000470742 NGLY1Q96IV0 654 aa28.79■■■□□ 2.2
ITSN1-224ENST00000470742 PLEKHG3A1L390 1219 aa28.78■■■□□ 2.2
ITSN1-224ENST00000470742 PPIP5K1Q6PFW1 1433 aa28.77■■■□□ 2.2
ITSN1-224ENST00000470742 ACEP12821 1306 aa28.77■■■□□ 2.2
ITSN1-224ENST00000470742 SOCS7O14512 581 aa28.77■■■□□ 2.2
ITSN1-224ENST00000470742 POLR3AO14802 1390 aaPredicted RBP28.76■■■□□ 2.2
ITSN1-224ENST00000470742 ABCA3Q99758 1704 aa28.76■■■□□ 2.19
ITSN1-224ENST00000470742 PAK3O75914 559 aaPredicted RBP28.75■■■□□ 2.19
ITSN1-224ENST00000470742 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
ITSN1-224ENST00000470742 HAP1P54257 671 aaPredicted RBP28.74■■■□□ 2.19
ITSN1-224ENST00000470742 SBNO2Q9Y2G9 1366 aa28.74■■■□□ 2.19
ITSN1-224ENST00000470742 CABLES1Q8TDN4 633 aa28.73■■■□□ 2.19
ITSN1-224ENST00000470742 CABP1Q9NZU7 370 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms