RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
NXF3-205ENST00000470724 SIRT1Q96EB6 747 aa13.73□□□□□ -0.21
NXF3-205ENST00000470724 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
NXF3-205ENST00000470724 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
NXF3-205ENST00000470724 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
NXF3-205ENST00000470724 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
NXF3-205ENST00000470724 BRINP3Q76B58 766 aa13.71□□□□□ -0.21
NXF3-205ENST00000470724 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
NXF3-205ENST00000470724 MST1RQ04912 1400 aa13.71□□□□□ -0.22
NXF3-205ENST00000470724 ORAI2Q96SN7 254 aa13.7□□□□□ -0.22
NXF3-205ENST00000470724 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
NXF3-205ENST00000470724 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
NXF3-205ENST00000470724 C1orf167Q5SNV9 1468 aa13.69□□□□□ -0.22
NXF3-205ENST00000470724 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
NXF3-205ENST00000470724 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
NXF3-205ENST00000470724 CENPJQ9HC77 1338 aaPredicted RBP13.68□□□□□ -0.22
NXF3-205ENST00000470724 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
NXF3-205ENST00000470724 EIF3AQ14152 1382 aaKnown RBP13.67□□□□□ -0.22
NXF3-205ENST00000470724 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
NXF3-205ENST00000470724 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
NXF3-205ENST00000470724 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
NXF3-205ENST00000470724 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.22
NXF3-205ENST00000470724 FOXO3O43524 673 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
NXF3-205ENST00000470724 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
NXF3-205ENST00000470724 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
NXF3-205ENST00000470724 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
NXF3-205ENST00000470724 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
NXF3-205ENST00000470724 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
NXF3-205ENST00000470724 MEX3CQ5U5Q3 659 aaKnown RBP13.62□□□□□ -0.23
NXF3-205ENST00000470724 LMOD2Q6P5Q4 547 aa13.62□□□□□ -0.23
NXF3-205ENST00000470724 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
NXF3-205ENST00000470724 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
NXF3-205ENST00000470724 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
NXF3-205ENST00000470724 JCADQ9P266 1359 aa13.61□□□□□ -0.23
NXF3-205ENST00000470724 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
NXF3-205ENST00000470724 PSME1Q06323 249 aa13.61□□□□□ -0.23
NXF3-205ENST00000470724 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
NXF3-205ENST00000470724 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
NXF3-205ENST00000470724 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
NXF3-205ENST00000470724 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
NXF3-205ENST00000470724 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
NXF3-205ENST00000470724 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
NXF3-205ENST00000470724 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
NXF3-205ENST00000470724 KRT28Q7Z3Y7 464 aa13.59□□□□□ -0.23
NXF3-205ENST00000470724 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
NXF3-205ENST00000470724 ANKARQ7Z5J8 1434 aa13.58□□□□□ -0.24
NXF3-205ENST00000470724 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
NXF3-205ENST00000470724 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
NXF3-205ENST00000470724 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
NXF3-205ENST00000470724 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
NXF3-205ENST00000470724 TULP4Q9NRJ4 1543 aa13.57□□□□□ -0.24
NXF3-205ENST00000470724 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
NXF3-205ENST00000470724 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
NXF3-205ENST00000470724 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
NXF3-205ENST00000470724 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
NXF3-205ENST00000470724 USP47Q96K76 1375 aa13.55□□□□□ -0.24
NXF3-205ENST00000470724 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
NXF3-205ENST00000470724 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
NXF3-205ENST00000470724 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
NXF3-205ENST00000470724 SPATA31A6Q5VVP1 1343 aa13.54□□□□□ -0.24
NXF3-205ENST00000470724 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
NXF3-205ENST00000470724 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
NXF3-205ENST00000470724 CABP1Q9NZU7 370 aa13.53□□□□□ -0.24
NXF3-205ENST00000470724 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
NXF3-205ENST00000470724 ACEP12821 1306 aa13.52□□□□□ -0.25
NXF3-205ENST00000470724 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
NXF3-205ENST00000470724 ATP7BP35670 1465 aa13.52□□□□□ -0.25
NXF3-205ENST00000470724 MED1Q15648 1581 aaPredicted RBP13.52□□□□□ -0.25
NXF3-205ENST00000470724 NHSL1Q5SYE7 1610 aa13.52□□□□□ -0.25
NXF3-205ENST00000470724 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
NXF3-205ENST00000470724 PXDNQ92626 1479 aa13.5□□□□□ -0.25
NXF3-205ENST00000470724 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
NXF3-205ENST00000470724 TMF1P82094 1093 aa13.5□□□□□ -0.25
NXF3-205ENST00000470724 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
NXF3-205ENST00000470724 C8orf37Q96NL8 207 aa13.5□□□□□ -0.25
NXF3-205ENST00000470724 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
NXF3-205ENST00000470724 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
NXF3-205ENST00000470724 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
NXF3-205ENST00000470724 ATAD2Q6PL18 1390 aa13.48□□□□□ -0.25
NXF3-205ENST00000470724 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
NXF3-205ENST00000470724 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
NXF3-205ENST00000470724 CABLES1Q8TDN4 633 aa13.48□□□□□ -0.25
NXF3-205ENST00000470724 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
NXF3-205ENST00000470724 SBNO1A3KN83 1393 aa13.47□□□□□ -0.25
NXF3-205ENST00000470724 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
NXF3-205ENST00000470724 SBNO2Q9Y2G9 1366 aa13.46□□□□□ -0.25
NXF3-205ENST00000470724 HSPA5P11021 654 aaKnown RBP13.46□□□□□ -0.25
NXF3-205ENST00000470724 HDGFL2Q7Z4V5 671 aaPredicted RBP13.46□□□□□ -0.25
NXF3-205ENST00000470724 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
NXF3-205ENST00000470724 TESK2Q96S53 571 aa13.46□□□□□ -0.25
NXF3-205ENST00000470724 LRP6O75581 1613 aa13.46□□□□□ -0.26
NXF3-205ENST00000470724 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
NXF3-205ENST00000470724 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
NXF3-205ENST00000470724 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms