RNA–Protein interactions for RNA: ENST00000470581.1

SEMA3C-207, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-207ENST00000470581 KIAA1210Q9ULL0 1709 aa35.58■■■■□ 3.29
SEMA3C-207ENST00000470581 POGKQ9P215 609 aa35.57■■■■□ 3.28
SEMA3C-207ENST00000470581 CDC42BPGQ6DT37 1551 aa35.56■■■■□ 3.28
SEMA3C-207ENST00000470581 PHLPP1O60346 1717 aa35.56■■■■□ 3.28
SEMA3C-207ENST00000470581 SAFB2Q14151 953 aaKnown RBP eCLIP35.55■■■■□ 3.28
SEMA3C-207ENST00000470581 C1orf167Q5SNV9 1468 aa35.54■■■■□ 3.28
SEMA3C-207ENST00000470581 NBPF1Q3BBV0 1214 aa35.5■■■■□ 3.27
SEMA3C-207ENST00000470581 AHDC1Q5TGY3 1603 aaPredicted RBP35.49■■■■□ 3.27
SEMA3C-207ENST00000470581 TONSLQ96HA7 1378 aa35.48■■■■□ 3.27
SEMA3C-207ENST00000470581 ORAI2Q96SN7 254 aa35.46■■■■□ 3.27
SEMA3C-207ENST00000470581 NUTM2FA1L443 756 aa35.45■■■■□ 3.27
SEMA3C-207ENST00000470581 COL16A1Q07092 1604 aaPredicted RBP35.45■■■■□ 3.27
SEMA3C-207ENST00000470581 ARHGEF28Q8N1W1 1705 aaKnown RBP35.43■■■■□ 3.26
SEMA3C-207ENST00000470581 FMN2Q9NZ56 1722 aa35.43■■■■□ 3.26
SEMA3C-207ENST00000470581 NHSL1Q5SYE7 1610 aa35.42■■■■□ 3.26
SEMA3C-207ENST00000470581 ESCO1Q5FWF5 840 aa35.41■■■■□ 3.26
SEMA3C-207ENST00000470581 TRPM1Q7Z4N2 1603 aa35.4■■■■□ 3.26
SEMA3C-207ENST00000470581 DISP3Q9P2K9 1392 aa35.39■■■■□ 3.26
SEMA3C-207ENST00000470581 MINK1Q8N4C8 1332 aaPredicted RBP35.39■■■■□ 3.26
SEMA3C-207ENST00000470581 DDX17Q92841 729 aaKnown RBP35.39■■■■□ 3.26
SEMA3C-207ENST00000470581 HIRIP3Q9BW71 556 aaPredicted RBP35.38■■■■□ 3.25
SEMA3C-207ENST00000470581 MED1Q15648 1581 aaPredicted RBP35.37■■■■□ 3.25
SEMA3C-207ENST00000470581 JCADQ9P266 1359 aa35.37■■■■□ 3.25
SEMA3C-207ENST00000470581 ADGRB2O60241 1585 aa35.36■■■■□ 3.25
SEMA3C-207ENST00000470581 NBPF8Q3BBV2 869 aa35.36■■■■□ 3.25
SEMA3C-207ENST00000470581 ROCK2O75116 1388 aaKnown RBP35.32■■■■□ 3.24
SEMA3C-207ENST00000470581 CLSPNQ9HAW4 1339 aa35.3■■■■□ 3.24
SEMA3C-207ENST00000470581 RGPD8O14715 1765 aaPredicted RBP35.29■■■■□ 3.24
SEMA3C-207ENST00000470581 LRRC59Q96AG4 307 aaKnown RBP35.29■■■■□ 3.24
SEMA3C-207ENST00000470581 WASLO00401 505 aaPredicted RBP35.28■■■■□ 3.24
SEMA3C-207ENST00000470581 NPHP3Q7Z494 1330 aa35.26■■■■□ 3.23
SEMA3C-207ENST00000470581 SHPRHQ149N8 1683 aa35.25■■■■□ 3.23
SEMA3C-207ENST00000470581 FOXO3O43524 673 aa35.25■■■■□ 3.23
SEMA3C-207ENST00000470581 SOS2Q07890 1332 aaPredicted RBP35.25■■■■□ 3.23
SEMA3C-207ENST00000470581 EIF3AQ14152 1382 aaKnown RBP35.25■■■■□ 3.23
SEMA3C-207ENST00000470581 ANKARQ7Z5J8 1434 aa35.24■■■■□ 3.23
SEMA3C-207ENST00000470581 CENPJQ9HC77 1338 aaPredicted RBP35.24■■■■□ 3.23
SEMA3C-207ENST00000470581 KIF1AQ12756 1690 aa35.24■■■■□ 3.23
SEMA3C-207ENST00000470581 CCER1Q8TC90 406 aaPredicted RBP35.23■■■■□ 3.23
SEMA3C-207ENST00000470581 USP32Q8NFA0 1604 aa35.22■■■■□ 3.23
SEMA3C-207ENST00000470581 PHF8Q9UPP1 1060 aa35.22■■■■□ 3.23
SEMA3C-207ENST00000470581 SPATA31A6Q5VVP1 1343 aa35.21■■■■□ 3.23
SEMA3C-207ENST00000470581 TULP4Q9NRJ4 1543 aa35.21■■■■□ 3.23
SEMA3C-207ENST00000470581 GPRASP1Q5JY77 1395 aa35.2■■■■□ 3.23
SEMA3C-207ENST00000470581 PHF23Q9BUL5 403 aaPredicted RBP35.19■■■■□ 3.22
SEMA3C-207ENST00000470581 RALGAPBQ86X10 1494 aa35.18■■■■□ 3.22
SEMA3C-207ENST00000470581 XPCQ01831 940 aaPredicted RBP35.18■■■■□ 3.22
SEMA3C-207ENST00000470581 PRR36Q9H6K5 1346 aa35.17■■■■□ 3.22
SEMA3C-207ENST00000470581 CDK19Q9BWU1 502 aa35.17■■■■□ 3.22
SEMA3C-207ENST00000470581 QRICH2Q9H0J4 1663 aa35.17■■■■□ 3.22
SEMA3C-207ENST00000470581 PXDNQ92626 1479 aa35.16■■■■□ 3.22
SEMA3C-207ENST00000470581 CARD11Q9BXL7 1154 aa35.16■■■■□ 3.22
SEMA3C-207ENST00000470581 PNPLA6Q8IY17 1366 aa35.14■■■■□ 3.22
SEMA3C-207ENST00000470581 PMFBP1Q8TBY8 1022 aa35.14■■■■□ 3.22
SEMA3C-207ENST00000470581 NUDT16Q96DE0 195 aaKnown RBP35.12■■■■□ 3.21
SEMA3C-207ENST00000470581 TIMELESSQ9UNS1 1208 aa35.12■■■■□ 3.21
SEMA3C-207ENST00000470581 NUTM2BA6NNL0 878 aaPredicted RBP35.11■■■■□ 3.21
SEMA3C-207ENST00000470581 NUTM2EB1AL46 878 aaPredicted RBP35.11■■■■□ 3.21
SEMA3C-207ENST00000470581 KRT28Q7Z3Y7 464 aa35.11■■■■□ 3.21
SEMA3C-207ENST00000470581 NUTM2AQ8IVF1 878 aaPredicted RBP35.11■■■■□ 3.21
SEMA3C-207ENST00000470581 LRP6O75581 1613 aa35.1■■■■□ 3.21
SEMA3C-207ENST00000470581 ATP7BP35670 1465 aa35.09■■■■□ 3.21
SEMA3C-207ENST00000470581 PSME1Q06323 249 aa35.08■■■■□ 3.21
SEMA3C-207ENST00000470581 ITSN1Q15811 1721 aa35.07■■■■□ 3.2
SEMA3C-207ENST00000470581 SRPK2P78362 688 aaKnown RBP35.06■■■■□ 3.2
SEMA3C-207ENST00000470581 MEX3CQ5U5Q3 659 aaKnown RBP35.06■■■■□ 3.2
SEMA3C-207ENST00000470581 NGDNQ8NEJ9 315 aaKnown RBP35.03■■■■□ 3.2
SEMA3C-207ENST00000470581 CABP2Q9NPB3 220 aa35.02■■■■□ 3.2
SEMA3C-207ENST00000470581 CCDC61Q9Y6R9 512 aa35.02■■■■□ 3.2
SEMA3C-207ENST00000470581 SPATA31A3Q5VYP0 1347 aa35.02■■■■□ 3.2
SEMA3C-207ENST00000470581 EVC2Q86UK5 1308 aa35.01■■■■□ 3.19
SEMA3C-207ENST00000470581 COL22A1Q8NFW1 1626 aaPredicted RBP34.99■■■■□ 3.19
SEMA3C-207ENST00000470581 ILDR2Q71H61 639 aa34.99■■■■□ 3.19
SEMA3C-207ENST00000470581 RGS17Q9UGC6 210 aaPredicted RBP34.99■■■■□ 3.19
SEMA3C-207ENST00000470581 TOPAZ1Q8N9V7 1692 aa34.98■■■■□ 3.19
SEMA3C-207ENST00000470581 SBNO1A3KN83 1393 aa34.98■■■■□ 3.19
SEMA3C-207ENST00000470581 TNS3Q68CZ2 1445 aa34.96■■■■□ 3.19
SEMA3C-207ENST00000470581 PLEKHG3A1L390 1219 aa34.93■■■■□ 3.18
SEMA3C-207ENST00000470581 LMOD2Q6P5Q4 547 aa34.93■■■■□ 3.18
SEMA3C-207ENST00000470581 SBNO2Q9Y2G9 1366 aa34.92■■■■□ 3.18
SEMA3C-207ENST00000470581 ADAMTS2O95450 1211 aa34.92■■■■□ 3.18
SEMA3C-207ENST00000470581 PPIP5K1Q6PFW1 1433 aa34.91■■■■□ 3.18
SEMA3C-207ENST00000470581 ACEP12821 1306 aa34.91■■■■□ 3.18
SEMA3C-207ENST00000470581 TRPM3Q9HCF6 1732 aaPredicted RBP34.91■■■■□ 3.18
SEMA3C-207ENST00000470581 POLR3AO14802 1390 aaPredicted RBP34.89■■■■□ 3.18
SEMA3C-207ENST00000470581 ARHGEF10O15013 1369 aa34.88■■■■□ 3.17
SEMA3C-207ENST00000470581 C8orf37Q96NL8 207 aa34.88■■■■□ 3.17
SEMA3C-207ENST00000470581 PAK3O75914 559 aaPredicted RBP34.87■■■■□ 3.17
SEMA3C-207ENST00000470581 CABP1Q9NZU7 370 aa34.86■■■■□ 3.17
SEMA3C-207ENST00000470581 ST20-MTHFSA0A0A6YYL1 179 aa34.85■■■■□ 3.17
SEMA3C-207ENST00000470581 POTEAQ6S8J7 498 aa34.84■■■■□ 3.17
SEMA3C-207ENST00000470581 PLEKHG5O94827 1062 aa34.83■■■■□ 3.17
SEMA3C-207ENST00000470581 ZNF772Q68DY9 489 aaPredicted RBP34.83■■■■□ 3.17
SEMA3C-207ENST00000470581 ALS2Q96Q42 1657 aa34.82■■■■□ 3.17
SEMA3C-207ENST00000470581 AFF2P51816 1311 aa34.82■■■■□ 3.17
SEMA3C-207ENST00000470581 NGLY1Q96IV0 654 aa34.82■■■■□ 3.16
SEMA3C-207ENST00000470581 USP47Q96K76 1375 aa34.82■■■■□ 3.16
SEMA3C-207ENST00000470581 HAP1P54257 671 aaPredicted RBP34.81■■■■□ 3.16
SEMA3C-207ENST00000470581 CABLES1Q8TDN4 633 aa34.81■■■■□ 3.16
SEMA3C-207ENST00000470581 ATAD2Q6PL18 1390 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms