RNA–Protein interactions for RNA: ENST00000470535.2

ABCA2-215, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-215ENST00000470535 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
ABCA2-215ENST00000470535 POGKQ9P215 609 aa17.11■□□□□ 0.33
ABCA2-215ENST00000470535 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
ABCA2-215ENST00000470535 PLEKHH1Q9ULM0 1364 aa17.1■□□□□ 0.33
ABCA2-215ENST00000470535 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
ABCA2-215ENST00000470535 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
ABCA2-215ENST00000470535 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
ABCA2-215ENST00000470535 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
ABCA2-215ENST00000470535 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
ABCA2-215ENST00000470535 MST1RQ04912 1400 aa17.05■□□□□ 0.32
ABCA2-215ENST00000470535 ROBO1Q9Y6N7 1651 aa17.05■□□□□ 0.32
ABCA2-215ENST00000470535 ROCK2O75116 1388 aaKnown RBP17.04■□□□□ 0.32
ABCA2-215ENST00000470535 CDC42BPGQ6DT37 1551 aa17.04■□□□□ 0.32
ABCA2-215ENST00000470535 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
ABCA2-215ENST00000470535 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
ABCA2-215ENST00000470535 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
ABCA2-215ENST00000470535 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
ABCA2-215ENST00000470535 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
ABCA2-215ENST00000470535 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
ABCA2-215ENST00000470535 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
ABCA2-215ENST00000470535 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
ABCA2-215ENST00000470535 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
ABCA2-215ENST00000470535 ESCO1Q5FWF5 840 aa16.98■□□□□ 0.31
ABCA2-215ENST00000470535 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
ABCA2-215ENST00000470535 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
ABCA2-215ENST00000470535 CENPJQ9HC77 1338 aaPredicted RBP16.97■□□□□ 0.31
ABCA2-215ENST00000470535 GPRASP1Q5JY77 1395 aa16.97■□□□□ 0.31
ABCA2-215ENST00000470535 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
ABCA2-215ENST00000470535 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
ABCA2-215ENST00000470535 ADGRB2O60241 1585 aa16.96■□□□□ 0.31
ABCA2-215ENST00000470535 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
ABCA2-215ENST00000470535 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
ABCA2-215ENST00000470535 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
ABCA2-215ENST00000470535 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
ABCA2-215ENST00000470535 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
ABCA2-215ENST00000470535 ANKARQ7Z5J8 1434 aa16.92■□□□□ 0.3
ABCA2-215ENST00000470535 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
ABCA2-215ENST00000470535 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
ABCA2-215ENST00000470535 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
ABCA2-215ENST00000470535 FOXO3O43524 673 aa16.9■□□□□ 0.3
ABCA2-215ENST00000470535 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
ABCA2-215ENST00000470535 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
ABCA2-215ENST00000470535 TULP4Q9NRJ4 1543 aa16.9■□□□□ 0.3
ABCA2-215ENST00000470535 NHSL1Q5SYE7 1610 aa16.89■□□□□ 0.29
ABCA2-215ENST00000470535 LRRC59Q96AG4 307 aaKnown RBP16.89■□□□□ 0.29
ABCA2-215ENST00000470535 JCADQ9P266 1359 aa16.89■□□□□ 0.29
ABCA2-215ENST00000470535 SRPK2P78362 688 aaKnown RBP16.88■□□□□ 0.29
ABCA2-215ENST00000470535 PRR36Q9H6K5 1346 aa16.88■□□□□ 0.29
ABCA2-215ENST00000470535 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
ABCA2-215ENST00000470535 PMFBP1Q8TBY8 1022 aa16.87■□□□□ 0.29
ABCA2-215ENST00000470535 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
ABCA2-215ENST00000470535 SOS2Q07890 1332 aaPredicted RBP16.87■□□□□ 0.29
ABCA2-215ENST00000470535 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
ABCA2-215ENST00000470535 KIF1AQ12756 1690 aa16.86■□□□□ 0.29
ABCA2-215ENST00000470535 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
ABCA2-215ENST00000470535 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
ABCA2-215ENST00000470535 PSME1Q06323 249 aa16.84■□□□□ 0.29
ABCA2-215ENST00000470535 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
ABCA2-215ENST00000470535 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
ABCA2-215ENST00000470535 ATP7BP35670 1465 aa16.84■□□□□ 0.29
ABCA2-215ENST00000470535 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
ABCA2-215ENST00000470535 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.28
ABCA2-215ENST00000470535 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
ABCA2-215ENST00000470535 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
ABCA2-215ENST00000470535 PXDNQ92626 1479 aa16.82■□□□□ 0.28
ABCA2-215ENST00000470535 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
ABCA2-215ENST00000470535 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
ABCA2-215ENST00000470535 NGDNQ8NEJ9 315 aaKnown RBP16.82■□□□□ 0.28
ABCA2-215ENST00000470535 USP47Q96K76 1375 aa16.81■□□□□ 0.28
ABCA2-215ENST00000470535 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
ABCA2-215ENST00000470535 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
ABCA2-215ENST00000470535 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
ABCA2-215ENST00000470535 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
ABCA2-215ENST00000470535 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
ABCA2-215ENST00000470535 NUTM2BA6NNL0 878 aaPredicted RBP16.78■□□□□ 0.28
ABCA2-215ENST00000470535 NUTM2EB1AL46 878 aaPredicted RBP16.78■□□□□ 0.28
ABCA2-215ENST00000470535 MEX3CQ5U5Q3 659 aaKnown RBP16.78■□□□□ 0.28
ABCA2-215ENST00000470535 NUTM2AQ8IVF1 878 aaPredicted RBP16.78■□□□□ 0.28
ABCA2-215ENST00000470535 PPIP5K1Q6PFW1 1433 aa16.78■□□□□ 0.28
ABCA2-215ENST00000470535 ACEP12821 1306 aa16.77■□□□□ 0.28
ABCA2-215ENST00000470535 SPATA31A3Q5VYP0 1347 aa16.77■□□□□ 0.28
ABCA2-215ENST00000470535 SBNO1A3KN83 1393 aa16.77■□□□□ 0.27
ABCA2-215ENST00000470535 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
ABCA2-215ENST00000470535 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
ABCA2-215ENST00000470535 TESK2Q96S53 571 aa16.76■□□□□ 0.27
ABCA2-215ENST00000470535 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
ABCA2-215ENST00000470535 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
ABCA2-215ENST00000470535 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
ABCA2-215ENST00000470535 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
ABCA2-215ENST00000470535 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
ABCA2-215ENST00000470535 LRP6O75581 1613 aa16.74■□□□□ 0.27
ABCA2-215ENST00000470535 TMF1P82094 1093 aa16.73■□□□□ 0.27
ABCA2-215ENST00000470535 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
ABCA2-215ENST00000470535 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
ABCA2-215ENST00000470535 PUS7Q96PZ0 661 aaKnown RBP16.72■□□□□ 0.27
ABCA2-215ENST00000470535 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
ABCA2-215ENST00000470535 COL22A1Q8NFW1 1626 aaPredicted RBP16.7■□□□□ 0.26
ABCA2-215ENST00000470535 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
ABCA2-215ENST00000470535 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
ABCA2-215ENST00000470535 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms