RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
RFTN1-208ENST00000470458 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
RFTN1-208ENST00000470458 WAPLQ7Z5K2 1190 aa15.61■□□□□ 0.09
RFTN1-208ENST00000470458 ASXL1Q8IXJ9 1541 aa15.61■□□□□ 0.09
RFTN1-208ENST00000470458 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
RFTN1-208ENST00000470458 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
RFTN1-208ENST00000470458 MED1Q15648 1581 aaPredicted RBP15.6■□□□□ 0.09
RFTN1-208ENST00000470458 ESCO1Q5FWF5 840 aa15.59■□□□□ 0.09
RFTN1-208ENST00000470458 NHSL1Q5SYE7 1610 aa15.58■□□□□ 0.09
RFTN1-208ENST00000470458 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.08
RFTN1-208ENST00000470458 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
RFTN1-208ENST00000470458 PSME1Q06323 249 aa15.57■□□□□ 0.08
RFTN1-208ENST00000470458 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
RFTN1-208ENST00000470458 ADGRB1O14514 1584 aa15.57■□□□□ 0.08
RFTN1-208ENST00000470458 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
RFTN1-208ENST00000470458 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
RFTN1-208ENST00000470458 KIF1AQ12756 1690 aa15.55■□□□□ 0.08
RFTN1-208ENST00000470458 ANKARQ7Z5J8 1434 aa15.55■□□□□ 0.08
RFTN1-208ENST00000470458 MEX3CQ5U5Q3 659 aaKnown RBP15.55■□□□□ 0.08
RFTN1-208ENST00000470458 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
RFTN1-208ENST00000470458 TONSLQ96HA7 1378 aa15.54■□□□□ 0.08
RFTN1-208ENST00000470458 SOS2Q07890 1332 aaPredicted RBP15.54■□□□□ 0.08
RFTN1-208ENST00000470458 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
RFTN1-208ENST00000470458 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
RFTN1-208ENST00000470458 ORAI2Q96SN7 254 aa15.53■□□□□ 0.08
RFTN1-208ENST00000470458 ADGRB2O60241 1585 aa15.53■□□□□ 0.08
RFTN1-208ENST00000470458 PLEKHH1Q9ULM0 1364 aa15.52■□□□□ 0.08
RFTN1-208ENST00000470458 ZNF772Q68DY9 489 aaPredicted RBP15.52■□□□□ 0.08
RFTN1-208ENST00000470458 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
RFTN1-208ENST00000470458 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
RFTN1-208ENST00000470458 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
RFTN1-208ENST00000470458 WASLO00401 505 aaPredicted RBP15.51■□□□□ 0.07
RFTN1-208ENST00000470458 SAFB2Q14151 953 aaKnown RBP eCLIP15.51■□□□□ 0.07
RFTN1-208ENST00000470458 FOXO3O43524 673 aa15.5■□□□□ 0.07
RFTN1-208ENST00000470458 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
RFTN1-208ENST00000470458 MINK1Q8N4C8 1332 aaPredicted RBP15.48■□□□□ 0.07
RFTN1-208ENST00000470458 ROCK2O75116 1388 aaKnown RBP15.48■□□□□ 0.07
RFTN1-208ENST00000470458 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
RFTN1-208ENST00000470458 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
RFTN1-208ENST00000470458 ITSN1Q15811 1721 aa15.46■□□□□ 0.07
RFTN1-208ENST00000470458 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
RFTN1-208ENST00000470458 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.07
RFTN1-208ENST00000470458 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
RFTN1-208ENST00000470458 TULP4Q9NRJ4 1543 aa15.46■□□□□ 0.07
RFTN1-208ENST00000470458 PNPLA6Q8IY17 1366 aa15.46■□□□□ 0.07
RFTN1-208ENST00000470458 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-208ENST00000470458 NUTM2BA6NNL0 878 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-208ENST00000470458 NUTM2EB1AL46 878 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-208ENST00000470458 NUTM2AQ8IVF1 878 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-208ENST00000470458 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
RFTN1-208ENST00000470458 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
RFTN1-208ENST00000470458 SBNO1A3KN83 1393 aa15.45■□□□□ 0.06
RFTN1-208ENST00000470458 ARHGEF10O15013 1369 aa15.45■□□□□ 0.06
RFTN1-208ENST00000470458 SOCS7O14512 581 aa15.44■□□□□ 0.06
RFTN1-208ENST00000470458 HIRIP3Q9BW71 556 aaPredicted RBP15.44■□□□□ 0.06
RFTN1-208ENST00000470458 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
RFTN1-208ENST00000470458 TRPM1Q7Z4N2 1603 aa15.43■□□□□ 0.06
RFTN1-208ENST00000470458 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
RFTN1-208ENST00000470458 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
RFTN1-208ENST00000470458 PXDNQ92626 1479 aa15.43■□□□□ 0.06
RFTN1-208ENST00000470458 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
RFTN1-208ENST00000470458 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
RFTN1-208ENST00000470458 DDX17Q92841 729 aaKnown RBP15.42■□□□□ 0.06
RFTN1-208ENST00000470458 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
RFTN1-208ENST00000470458 BRD4O60885 1362 aaPredicted RBP15.41■□□□□ 0.06
RFTN1-208ENST00000470458 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
RFTN1-208ENST00000470458 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
RFTN1-208ENST00000470458 NGLY1Q96IV0 654 aa15.41■□□□□ 0.06
RFTN1-208ENST00000470458 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
RFTN1-208ENST00000470458 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
RFTN1-208ENST00000470458 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
RFTN1-208ENST00000470458 TNS3Q68CZ2 1445 aa15.38■□□□□ 0.05
RFTN1-208ENST00000470458 PMFBP1Q8TBY8 1022 aa15.38■□□□□ 0.05
RFTN1-208ENST00000470458 C8orf37Q96NL8 207 aa15.38■□□□□ 0.05
RFTN1-208ENST00000470458 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
RFTN1-208ENST00000470458 RXRBP28702 533 aa15.37■□□□□ 0.05
RFTN1-208ENST00000470458 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
RFTN1-208ENST00000470458 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
RFTN1-208ENST00000470458 RGS17Q9UGC6 210 aaPredicted RBP15.37■□□□□ 0.05
RFTN1-208ENST00000470458 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
RFTN1-208ENST00000470458 LRP6O75581 1613 aa15.36■□□□□ 0.05
RFTN1-208ENST00000470458 USP32Q8NFA0 1604 aa15.36■□□□□ 0.05
RFTN1-208ENST00000470458 RALGAPBQ86X10 1494 aa15.36■□□□□ 0.05
RFTN1-208ENST00000470458 ADAMTS2O95450 1211 aa15.36■□□□□ 0.05
RFTN1-208ENST00000470458 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
RFTN1-208ENST00000470458 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
RFTN1-208ENST00000470458 AFF2P51816 1311 aa15.36■□□□□ 0.05
RFTN1-208ENST00000470458 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
RFTN1-208ENST00000470458 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
RFTN1-208ENST00000470458 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
RFTN1-208ENST00000470458 ATAD2Q6PL18 1390 aa15.35■□□□□ 0.05
RFTN1-208ENST00000470458 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
RFTN1-208ENST00000470458 ATP7BP35670 1465 aa15.34■□□□□ 0.05
RFTN1-208ENST00000470458 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
RFTN1-208ENST00000470458 RBM6P78332 1123 aaKnown RBP15.34■□□□□ 0.05
RFTN1-208ENST00000470458 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
RFTN1-208ENST00000470458 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
RFTN1-208ENST00000470458 USP21Q9UK80 565 aa15.34■□□□□ 0.05
RFTN1-208ENST00000470458 PRR36Q9H6K5 1346 aa15.34■□□□□ 0.05
RFTN1-208ENST00000470458 POTEAQ6S8J7 498 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms