RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 NALCNQ8IZF0 1738 aa27.68■■■□□ 2.02
PCGF3-208ENST00000470161 PLEKHH1Q9ULM0 1364 aa27.68■■■□□ 2.02
PCGF3-208ENST00000470161 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
PCGF3-208ENST00000470161 ROBO1Q9Y6N7 1651 aa27.65■■■□□ 2.02
PCGF3-208ENST00000470161 KIAA1210Q9ULL0 1709 aa27.64■■■□□ 2.02
PCGF3-208ENST00000470161 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
PCGF3-208ENST00000470161 MST1RQ04912 1400 aa27.62■■■□□ 2.01
PCGF3-208ENST00000470161 BRINP3Q76B58 766 aa27.59■■■□□ 2.01
PCGF3-208ENST00000470161 ROCK2O75116 1388 aaKnown RBP27.58■■■□□ 2.01
PCGF3-208ENST00000470161 NUTM2FA1L443 756 aa27.57■■■□□ 2
PCGF3-208ENST00000470161 CDC42BPGQ6DT37 1551 aa27.57■■■□□ 2
PCGF3-208ENST00000470161 NBPF8Q3BBV2 869 aa27.56■■■□□ 2
PCGF3-208ENST00000470161 C1orf167Q5SNV9 1468 aa27.56■■■□□ 2
PCGF3-208ENST00000470161 MINK1Q8N4C8 1332 aaPredicted RBP27.56■■■□□ 2
PCGF3-208ENST00000470161 HIRIP3Q9BW71 556 aaPredicted RBP27.55■■■□□ 2
PCGF3-208ENST00000470161 ESCO1Q5FWF5 840 aa27.54■■■□□ 2
PCGF3-208ENST00000470161 TRPM1Q7Z4N2 1603 aa27.53■■■□□ 2
PCGF3-208ENST00000470161 ORAI2Q96SN7 254 aa27.52■■■□□ 2
PCGF3-208ENST00000470161 TIMELESSQ9UNS1 1208 aa27.52■■■□□ 2
PCGF3-208ENST00000470161 ARHGEF28Q8N1W1 1705 aaKnown RBP27.49■■□□□ 1.99
PCGF3-208ENST00000470161 CARD11Q9BXL7 1154 aa27.49■■□□□ 1.99
PCGF3-208ENST00000470161 CENPJQ9HC77 1338 aaPredicted RBP27.48■■□□□ 1.99
PCGF3-208ENST00000470161 PHLPP1O60346 1717 aa27.48■■□□□ 1.99
PCGF3-208ENST00000470161 WASLO00401 505 aaPredicted RBP27.46■■□□□ 1.99
PCGF3-208ENST00000470161 EIF3AQ14152 1382 aaKnown RBP27.45■■□□□ 1.98
PCGF3-208ENST00000470161 DDX17Q92841 729 aaKnown RBP27.44■■□□□ 1.98
PCGF3-208ENST00000470161 FMN2Q9NZ56 1722 aa27.44■■□□□ 1.98
PCGF3-208ENST00000470161 AHDC1Q5TGY3 1603 aaPredicted RBP27.44■■□□□ 1.98
PCGF3-208ENST00000470161 ADGRB2O60241 1585 aa27.43■■□□□ 1.98
PCGF3-208ENST00000470161 GPRASP1Q5JY77 1395 aa27.42■■□□□ 1.98
PCGF3-208ENST00000470161 RALGAPBQ86X10 1494 aa27.42■■□□□ 1.98
PCGF3-208ENST00000470161 LRRC59Q96AG4 307 aaKnown RBP27.41■■□□□ 1.98
PCGF3-208ENST00000470161 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
PCGF3-208ENST00000470161 FOXO3O43524 673 aa27.4■■□□□ 1.98
PCGF3-208ENST00000470161 PHF8Q9UPP1 1060 aa27.4■■□□□ 1.98
PCGF3-208ENST00000470161 JCADQ9P266 1359 aa27.39■■□□□ 1.98
PCGF3-208ENST00000470161 CDK19Q9BWU1 502 aa27.39■■□□□ 1.97
PCGF3-208ENST00000470161 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
PCGF3-208ENST00000470161 COL16A1Q07092 1604 aaPredicted RBP27.38■■□□□ 1.97
PCGF3-208ENST00000470161 NHSL1Q5SYE7 1610 aa27.37■■□□□ 1.97
PCGF3-208ENST00000470161 SRPK2P78362 688 aaKnown RBP27.36■■□□□ 1.97
PCGF3-208ENST00000470161 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
PCGF3-208ENST00000470161 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
PCGF3-208ENST00000470161 SOS2Q07890 1332 aaPredicted RBP27.34■■□□□ 1.97
PCGF3-208ENST00000470161 NUDT16Q96DE0 195 aaKnown RBP27.33■■□□□ 1.97
PCGF3-208ENST00000470161 XPCQ01831 940 aaPredicted RBP27.33■■□□□ 1.97
PCGF3-208ENST00000470161 QRICH2Q9H0J4 1663 aa27.32■■□□□ 1.96
PCGF3-208ENST00000470161 EVC2Q86UK5 1308 aa27.31■■□□□ 1.96
PCGF3-208ENST00000470161 PRR36Q9H6K5 1346 aa27.31■■□□□ 1.96
PCGF3-208ENST00000470161 PSME1Q06323 249 aa27.31■■□□□ 1.96
PCGF3-208ENST00000470161 KIF1AQ12756 1690 aa27.31■■□□□ 1.96
PCGF3-208ENST00000470161 RGPD8O14715 1765 aaPredicted RBP27.31■■□□□ 1.96
PCGF3-208ENST00000470161 DISP3Q9P2K9 1392 aa27.3■■□□□ 1.96
PCGF3-208ENST00000470161 NGDNQ8NEJ9 315 aaKnown RBP27.3■■□□□ 1.96
PCGF3-208ENST00000470161 KRT28Q7Z3Y7 464 aa27.29■■□□□ 1.96
PCGF3-208ENST00000470161 CCDC61Q9Y6R9 512 aa27.29■■□□□ 1.96
PCGF3-208ENST00000470161 SPATA31A6Q5VVP1 1343 aa27.28■■□□□ 1.96
PCGF3-208ENST00000470161 CABP2Q9NPB3 220 aa27.28■■□□□ 1.96
PCGF3-208ENST00000470161 USP32Q8NFA0 1604 aa27.28■■□□□ 1.96
PCGF3-208ENST00000470161 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
PCGF3-208ENST00000470161 MED1Q15648 1581 aaPredicted RBP27.25■■□□□ 1.95
PCGF3-208ENST00000470161 ATP7BP35670 1465 aa27.25■■□□□ 1.95
PCGF3-208ENST00000470161 NUTM2BA6NNL0 878 aaPredicted RBP27.24■■□□□ 1.95
PCGF3-208ENST00000470161 NUTM2EB1AL46 878 aaPredicted RBP27.24■■□□□ 1.95
PCGF3-208ENST00000470161 NUTM2AQ8IVF1 878 aaPredicted RBP27.24■■□□□ 1.95
PCGF3-208ENST00000470161 PXDNQ92626 1479 aa27.23■■□□□ 1.95
PCGF3-208ENST00000470161 SHPRHQ149N8 1683 aa27.22■■□□□ 1.95
PCGF3-208ENST00000470161 ST20-MTHFSA0A0A6YYL1 179 aa27.22■■□□□ 1.95
PCGF3-208ENST00000470161 MEX3CQ5U5Q3 659 aaKnown RBP27.22■■□□□ 1.95
PCGF3-208ENST00000470161 PNPLA6Q8IY17 1366 aa27.22■■□□□ 1.95
PCGF3-208ENST00000470161 SBNO2Q9Y2G9 1366 aa27.21■■□□□ 1.95
PCGF3-208ENST00000470161 SLC24A1O60721 1099 aa27.21■■□□□ 1.95
PCGF3-208ENST00000470161 LMOD2Q6P5Q4 547 aa27.21■■□□□ 1.95
PCGF3-208ENST00000470161 ITSN1Q15811 1721 aa27.2■■□□□ 1.95
PCGF3-208ENST00000470161 USP47Q96K76 1375 aa27.2■■□□□ 1.94
PCGF3-208ENST00000470161 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
PCGF3-208ENST00000470161 SPATA31A3Q5VYP0 1347 aa27.18■■□□□ 1.94
PCGF3-208ENST00000470161 PLEKHG3A1L390 1219 aa27.17■■□□□ 1.94
PCGF3-208ENST00000470161 PPIP5K1Q6PFW1 1433 aa27.17■■□□□ 1.94
PCGF3-208ENST00000470161 ACEP12821 1306 aa27.17■■□□□ 1.94
PCGF3-208ENST00000470161 PAK3O75914 559 aaPredicted RBP27.17■■□□□ 1.94
PCGF3-208ENST00000470161 CABP1Q9NZU7 370 aa27.16■■□□□ 1.94
PCGF3-208ENST00000470161 SBNO1A3KN83 1393 aa27.15■■□□□ 1.94
PCGF3-208ENST00000470161 TNS3Q68CZ2 1445 aa27.13■■□□□ 1.93
PCGF3-208ENST00000470161 ATAD2Q6PL18 1390 aa27.13■■□□□ 1.93
PCGF3-208ENST00000470161 POLR3AO14802 1390 aaPredicted RBP27.12■■□□□ 1.93
PCGF3-208ENST00000470161 HAP1P54257 671 aaPredicted RBP27.11■■□□□ 1.93
PCGF3-208ENST00000470161 TESK2Q96S53 571 aa27.11■■□□□ 1.93
PCGF3-208ENST00000470161 ARHGEF10O15013 1369 aa27.11■■□□□ 1.93
PCGF3-208ENST00000470161 PLEKHG5O94827 1062 aa27.11■■□□□ 1.93
PCGF3-208ENST00000470161 TOPAZ1Q8N9V7 1692 aa27.11■■□□□ 1.93
PCGF3-208ENST00000470161 LRP6O75581 1613 aa27.1■■□□□ 1.93
PCGF3-208ENST00000470161 ADAMTS2O95450 1211 aa27.1■■□□□ 1.93
PCGF3-208ENST00000470161 TMF1P82094 1093 aa27.09■■□□□ 1.93
PCGF3-208ENST00000470161 TMC1Q8TDI8 760 aa27.08■■□□□ 1.92
PCGF3-208ENST00000470161 EIF4G2P78344 907 aaKnown RBP eCLIP27.06■■□□□ 1.923e-6■■■■■ 28.1
PCGF3-208ENST00000470161 C8orf37Q96NL8 207 aa27.06■■□□□ 1.92
PCGF3-208ENST00000470161 PUS7Q96PZ0 661 aaKnown RBP27.05■■□□□ 1.92
PCGF3-208ENST00000470161 ZNF692Q9BU19 519 aaPredicted RBP27.05■■□□□ 1.92
PCGF3-208ENST00000470161 COL22A1Q8NFW1 1626 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms