RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 LRRC59Q96AG4 307 aaKnown RBP31.01■■■□□ 2.55
RTN4R-205ENST00000469601 KNDC1Q76NI1 1749 aa31■■■□□ 2.55
RTN4R-205ENST00000469601 CDC42BPGQ6DT37 1551 aa31■■■□□ 2.55
RTN4R-205ENST00000469601 ORAI2Q96SN7 254 aa30.96■■■□□ 2.55
RTN4R-205ENST00000469601 NHSL1Q5SYE7 1610 aa30.95■■■□□ 2.55
RTN4R-205ENST00000469601 PLEKHH1Q9ULM0 1364 aa30.95■■■□□ 2.55
RTN4R-205ENST00000469601 RGS17Q9UGC6 210 aaPredicted RBP30.94■■■□□ 2.54
RTN4R-205ENST00000469601 SHPRHQ149N8 1683 aa30.93■■■□□ 2.54
RTN4R-205ENST00000469601 ESCO1Q5FWF5 840 aa30.92■■■□□ 2.54
RTN4R-205ENST00000469601 MEX3CQ5U5Q3 659 aaKnown RBP30.92■■■□□ 2.54
RTN4R-205ENST00000469601 DDX17Q92841 729 aaKnown RBP30.91■■■□□ 2.54
RTN4R-205ENST00000469601 PRAM1Q96QH2 718 aa30.9■■■□□ 2.54
RTN4R-205ENST00000469601 POGKQ9P215 609 aa30.9■■■□□ 2.54
RTN4R-205ENST00000469601 DLC1Q96QB1 1528 aa30.88■■■□□ 2.53
RTN4R-205ENST00000469601 SOS2Q07890 1332 aaPredicted RBP30.88■■■□□ 2.53
RTN4R-205ENST00000469601 NPHP3Q7Z494 1330 aa30.88■■■□□ 2.53
RTN4R-205ENST00000469601 ADGRB1O14514 1584 aa30.87■■■□□ 2.53
RTN4R-205ENST00000469601 LRP6O75581 1613 aa30.85■■■□□ 2.53
RTN4R-205ENST00000469601 NUTM2BA6NNL0 878 aaPredicted RBP30.85■■■□□ 2.53
RTN4R-205ENST00000469601 NUTM2EB1AL46 878 aaPredicted RBP30.85■■■□□ 2.53
RTN4R-205ENST00000469601 NUTM2AQ8IVF1 878 aaPredicted RBP30.85■■■□□ 2.53
RTN4R-205ENST00000469601 PNPLA6Q8IY17 1366 aa30.84■■■□□ 2.53
RTN4R-205ENST00000469601 TRAK1Q9UPV9 953 aa30.84■■■□□ 2.53
RTN4R-205ENST00000469601 NUTM2FA1L443 756 aa30.83■■■□□ 2.53
RTN4R-205ENST00000469601 SAFB2Q14151 953 aaKnown RBP eCLIP30.82■■■□□ 2.52
RTN4R-205ENST00000469601 ZNF772Q68DY9 489 aaPredicted RBP30.8■■■□□ 2.52
RTN4R-205ENST00000469601 POTEAQ6S8J7 498 aa30.8■■■□□ 2.52
RTN4R-205ENST00000469601 FOXO3O43524 673 aa30.79■■■□□ 2.52
RTN4R-205ENST00000469601 FMN2Q9NZ56 1722 aa30.77■■■□□ 2.52
RTN4R-205ENST00000469601 EIF3AQ14152 1382 aaKnown RBP30.73■■■□□ 2.51
RTN4R-205ENST00000469601 PXDNQ92626 1479 aa30.73■■■□□ 2.51
RTN4R-205ENST00000469601 TRIM26Q12899 539 aaPredicted RBP30.72■■■□□ 2.51
RTN4R-205ENST00000469601 PHF8Q9UPP1 1060 aa30.72■■■□□ 2.51
RTN4R-205ENST00000469601 ANKARQ7Z5J8 1434 aa30.72■■■□□ 2.51
RTN4R-205ENST00000469601 KIF1AQ12756 1690 aa30.71■■■□□ 2.51
RTN4R-205ENST00000469601 ADGRB2O60241 1585 aa30.71■■■□□ 2.51
RTN4R-205ENST00000469601 MINK1Q8N4C8 1332 aaPredicted RBP30.7■■■□□ 2.5
RTN4R-205ENST00000469601 XPCQ01831 940 aaPredicted RBP30.69■■■□□ 2.5
RTN4R-205ENST00000469601 HIRIP3Q9BW71 556 aaPredicted RBP30.68■■■□□ 2.5
RTN4R-205ENST00000469601 PSME1Q06323 249 aa30.67■■■□□ 2.5
RTN4R-205ENST00000469601 C8orf37Q96NL8 207 aa30.67■■■□□ 2.5
RTN4R-205ENST00000469601 AFF2P51816 1311 aa30.67■■■□□ 2.5
RTN4R-205ENST00000469601 WASLO00401 505 aaPredicted RBP30.66■■■□□ 2.5
RTN4R-205ENST00000469601 KRT28Q7Z3Y7 464 aa30.66■■■□□ 2.5
RTN4R-205ENST00000469601 L3MBTL2Q969R5 705 aa30.66■■■□□ 2.5
RTN4R-205ENST00000469601 SIN3AQ96ST3 1273 aa30.66■■■□□ 2.5
RTN4R-205ENST00000469601 KIAA1210Q9ULL0 1709 aa30.66■■■□□ 2.5
RTN4R-205ENST00000469601 ADAMTS2O95450 1211 aa30.65■■■□□ 2.5
RTN4R-205ENST00000469601 NEUROD1Q13562 356 aa30.64■■■□□ 2.5
RTN4R-205ENST00000469601 NGLY1Q96IV0 654 aa30.63■■■□□ 2.49
RTN4R-205ENST00000469601 SPATA31A3Q5VYP0 1347 aa30.62■■■□□ 2.49
RTN4R-205ENST00000469601 COL22A1Q8NFW1 1626 aaPredicted RBP30.62■■■□□ 2.49
RTN4R-205ENST00000469601 NBPF1Q3BBV0 1214 aa30.61■■■□□ 2.49
RTN4R-205ENST00000469601 TULP4Q9NRJ4 1543 aa30.59■■■□□ 2.49
RTN4R-205ENST00000469601 RXRBP28702 533 aa30.59■■■□□ 2.49
RTN4R-205ENST00000469601 ARHGEF28Q8N1W1 1705 aaKnown RBP30.58■■■□□ 2.49
RTN4R-205ENST00000469601 PMFBP1Q8TBY8 1022 aa30.57■■■□□ 2.48
RTN4R-205ENST00000469601 SBNO1A3KN83 1393 aa30.56■■■□□ 2.48
RTN4R-205ENST00000469601 TNS3Q68CZ2 1445 aa30.55■■■□□ 2.48
RTN4R-205ENST00000469601 USP32Q8NFA0 1604 aa30.54■■■□□ 2.48
RTN4R-205ENST00000469601 GPRASP1Q5JY77 1395 aa30.54■■■□□ 2.48
RTN4R-205ENST00000469601 PRR36Q9H6K5 1346 aa30.53■■■□□ 2.48
RTN4R-205ENST00000469601 QTRT2Q9H974 415 aaKnown RBP30.53■■■□□ 2.48
RTN4R-205ENST00000469601 ARHGEF10O15013 1369 aa30.53■■■□□ 2.48
RTN4R-205ENST00000469601 FNBP4Q8N3X1 1017 aaPredicted RBP30.52■■■□□ 2.48
RTN4R-205ENST00000469601 RGPD8O14715 1765 aaPredicted RBP30.51■■■□□ 2.48
RTN4R-205ENST00000469601 CDK19Q9BWU1 502 aa30.51■■■□□ 2.47
RTN4R-205ENST00000469601 CENPJQ9HC77 1338 aaPredicted RBP30.5■■■□□ 2.47
RTN4R-205ENST00000469601 NGDNQ8NEJ9 315 aaKnown RBP30.5■■■□□ 2.47
RTN4R-205ENST00000469601 NUDT16Q96DE0 195 aaKnown RBP30.5■■■□□ 2.47
RTN4R-205ENST00000469601 USP21Q9UK80 565 aa30.5■■■□□ 2.47
RTN4R-205ENST00000469601 CDK12Q9NYV4 1490 aaPredicted RBP30.49■■■□□ 2.47
RTN4R-205ENST00000469601 HAP1P54257 671 aaPredicted RBP30.48■■■□□ 2.47
RTN4R-205ENST00000469601 RBM6P78332 1123 aaKnown RBP30.48■■■□□ 2.47
RTN4R-205ENST00000469601 LMOD2Q6P5Q4 547 aa30.48■■■□□ 2.47
RTN4R-205ENST00000469601 ATP7BP35670 1465 aa30.45■■■□□ 2.47
RTN4R-205ENST00000469601 TRPC5Q9UL62 973 aaPredicted RBP30.45■■■□□ 2.47
RTN4R-205ENST00000469601 ROCK2O75116 1388 aaKnown RBP30.44■■■□□ 2.46
RTN4R-205ENST00000469601 CCDC61Q9Y6R9 512 aa30.44■■■□□ 2.46
RTN4R-205ENST00000469601 TONSLQ96HA7 1378 aa30.42■■■□□ 2.46
RTN4R-205ENST00000469601 SRPK2P78362 688 aaKnown RBP30.4■■■□□ 2.46
RTN4R-205ENST00000469601 TRPM1Q7Z4N2 1603 aa30.4■■■□□ 2.46
RTN4R-205ENST00000469601 ITSN1Q15811 1721 aa30.39■■■□□ 2.45
RTN4R-205ENST00000469601 CABLES1Q8TDN4 633 aa30.38■■■□□ 2.45
RTN4R-205ENST00000469601 PLEKHG3A1L390 1219 aa30.37■■■□□ 2.45
RTN4R-205ENST00000469601 PAK3O75914 559 aaPredicted RBP30.37■■■□□ 2.45
RTN4R-205ENST00000469601 ATRNO75882 1429 aa30.36■■■□□ 2.45
RTN4R-205ENST00000469601 BCL9LQ86UU0 1499 aa30.36■■■□□ 2.45
RTN4R-205ENST00000469601 POLR3AO14802 1390 aaPredicted RBP30.35■■■□□ 2.45
RTN4R-205ENST00000469601 MARF1Q9Y4F3 1742 aaKnown RBP30.34■■■□□ 2.45
RTN4R-205ENST00000469601 PLEKHG5O94827 1062 aa30.34■■■□□ 2.45
RTN4R-205ENST00000469601 NBPF8Q3BBV2 869 aa30.34■■■□□ 2.45
RTN4R-205ENST00000469601 TRPM3Q9HCF6 1732 aaPredicted RBP30.33■■■□□ 2.45
RTN4R-205ENST00000469601 ACEP12821 1306 aa30.33■■■□□ 2.45
RTN4R-205ENST00000469601 UNC5CLQ8IV45 518 aa30.33■■■□□ 2.45
RTN4R-205ENST00000469601 EVC2Q86UK5 1308 aa30.32■■■□□ 2.44
RTN4R-205ENST00000469601 SLIT2O94813 1529 aa30.32■■■□□ 2.44
RTN4R-205ENST00000469601 CABP2Q9NPB3 220 aa30.31■■■□□ 2.44
RTN4R-205ENST00000469601 RGS12O14924 1447 aa30.3■■■□□ 2.44
RTN4R-205ENST00000469601 QRICH2Q9H0J4 1663 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms