RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 TEX14Q8IWB6 1497 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 ABCA6Q8N139 1617 aa7.74□□□□□ -1.17
ITGA6-208ENST00000469534 AXIN2Q9Y2T1 843 aa7.74□□□□□ -1.17
ITGA6-208ENST00000469534 HECW2Q9P2P5 1572 aa7.74□□□□□ -1.17
ITGA6-208ENST00000469534 NCKAP5LQ9HCH0 1330 aa7.74□□□□□ -1.17
ITGA6-208ENST00000469534 COL17A1Q9UMD9 1497 aaPredicted RBP7.74□□□□□ -1.17
ITGA6-208ENST00000469534 ROCK1Q13464 1354 aa7.73□□□□□ -1.17
ITGA6-208ENST00000469534 PLXNC1O60486 1568 aa7.73□□□□□ -1.17
ITGA6-208ENST00000469534 ZNF518AQ6AHZ1 1483 aa7.73□□□□□ -1.17
ITGA6-208ENST00000469534 DHX57Q6P158 1386 aaKnown RBP7.72□□□□□ -1.17
ITGA6-208ENST00000469534 KDM5CP41229 1560 aa7.72□□□□□ -1.17
ITGA6-208ENST00000469534 ANKRD50Q9ULJ7 1429 aa7.72□□□□□ -1.17
ITGA6-208ENST00000469534 YEATS2Q9ULM3 1422 aa7.72□□□□□ -1.17
ITGA6-208ENST00000469534 PSDA5PKW4 1024 aaPredicted RBP7.72□□□□□ -1.17
ITGA6-208ENST00000469534 OXER1Q8TDS5 423 aa7.72□□□□□ -1.17
ITGA6-208ENST00000469534 CFAP65Q6ZU64 1925 aaKnown RBP7.72□□□□□ -1.17
ITGA6-208ENST00000469534 DIP2CQ9Y2E4 1556 aa7.71□□□□□ -1.17
ITGA6-208ENST00000469534 TBC1D12O60347 775 aa7.71□□□□□ -1.18
ITGA6-208ENST00000469534 RSPH4AQ5TD94 716 aa7.71□□□□□ -1.18
ITGA6-208ENST00000469534 SIGLEC1Q9BZZ2 1709 aa7.71□□□□□ -1.18
ITGA6-208ENST00000469534 DUOX2Q9NRD8 1548 aa7.7□□□□□ -1.18
ITGA6-208ENST00000469534 PDE4AP27815 886 aa7.7□□□□□ -1.18
ITGA6-208ENST00000469534 CEP152O94986 1710 aa7.69□□□□□ -1.18
ITGA6-208ENST00000469534 ARHGAP33O14559 1287 aa7.69□□□□□ -1.18
ITGA6-208ENST00000469534 KIF3BO15066 747 aa7.69□□□□□ -1.18
ITGA6-208ENST00000469534 PPP1R15BQ5SWA1 713 aa7.69□□□□□ -1.18
ITGA6-208ENST00000469534 NEUROD1Q13562 356 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 MLECQ14165 292 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 SIN3AQ96ST3 1273 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 NUP155O75694 1391 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 RTEL1-TNFRSF6BF6WH68 1400 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 A2MP01023 1474 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 PZPP20742 1482 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 MLH3Q9UHC1 1453 aa7.68□□□□□ -1.18
ITGA6-208ENST00000469534 UNC13BO14795 1591 aa7.67□□□□□ -1.18
ITGA6-208ENST00000469534 HRCP23327 699 aa7.67□□□□□ -1.18
ITGA6-208ENST00000469534 ZMYM4Q5VZL5 1548 aa7.67□□□□□ -1.18
ITGA6-208ENST00000469534 MFSD10Q14728 455 aa7.66□□□□□ -1.18
ITGA6-208ENST00000469534 GGT6Q6P531 493 aa7.66□□□□□ -1.18
ITGA6-208ENST00000469534 MPHOSPH9Q99550 1183 aa7.66□□□□□ -1.18
ITGA6-208ENST00000469534 HCSTQ9UBK5 93 aa7.66□□□□□ -1.18
ITGA6-208ENST00000469534 ERBINQ96RT1 1412 aa7.66□□□□□ -1.18
ITGA6-208ENST00000469534 ARHGEF40Q8TER5 1519 aa7.66□□□□□ -1.18
ITGA6-208ENST00000469534 DHX29Q7Z478 1369 aaKnown RBP7.65□□□□□ -1.18
ITGA6-208ENST00000469534 MROH1Q8NDA8 1641 aa7.65□□□□□ -1.18
ITGA6-208ENST00000469534 UPF1Q92900 1129 aaKnown RBP eCLIP7.65□□□□□ -1.18
ITGA6-208ENST00000469534 LARP6Q9BRS8 491 aaKnown RBP7.65□□□□□ -1.18
ITGA6-208ENST00000469534 ANO8Q9HCE9 1232 aaPredicted RBP7.65□□□□□ -1.18
ITGA6-208ENST00000469534 FAM135AQ9P2D6 1515 aa7.65□□□□□ -1.18
ITGA6-208ENST00000469534 EIF2AK4Q9P2K8 1649 aaKnown RBP7.65□□□□□ -1.18
ITGA6-208ENST00000469534 DEPDC5O75140 1603 aa7.64□□□□□ -1.19
ITGA6-208ENST00000469534 IQGAP3Q86VI3 1631 aa7.64□□□□□ -1.19
ITGA6-208ENST00000469534 ARID4BQ4LE39 1312 aaPredicted RBP7.64□□□□□ -1.19
ITGA6-208ENST00000469534 TK2O00142 265 aa7.64□□□□□ -1.19
ITGA6-208ENST00000469534 PPP4R3BQ5MIZ7 849 aa7.64□□□□□ -1.19
ITGA6-208ENST00000469534 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
ITGA6-208ENST00000469534 E9PCH4 1651 aa7.63□□□□□ -1.19
ITGA6-208ENST00000469534 ATP10AO60312 1499 aa7.63□□□□□ -1.19
ITGA6-208ENST00000469534 CADPS2Q86UW7 1296 aa7.63□□□□□ -1.19
ITGA6-208ENST00000469534 DDX27Q96GQ7 796 aaKnown RBP7.63□□□□□ -1.19
ITGA6-208ENST00000469534 CLTCQ00610 1675 aaKnown RBP7.63□□□□□ -1.19
ITGA6-208ENST00000469534 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
ITGA6-208ENST00000469534 KDM5DQ9BY66 1539 aa7.62□□□□□ -1.19
ITGA6-208ENST00000469534 PSEN2P49810 448 aa7.62□□□□□ -1.19
ITGA6-208ENST00000469534 DMRTA1Q5VZB9 504 aa7.62□□□□□ -1.19
ITGA6-208ENST00000469534 HRO43593 1189 aa7.61□□□□□ -1.19
ITGA6-208ENST00000469534 PRDM15P57071 1507 aaPredicted RBP7.61□□□□□ -1.19
ITGA6-208ENST00000469534 MAGI2Q86UL8 1455 aa7.61□□□□□ -1.19
ITGA6-208ENST00000469534 TET3O43151 1660 aa7.6□□□□□ -1.19
ITGA6-208ENST00000469534 KANK1Q14678 1352 aa7.6□□□□□ -1.19
ITGA6-208ENST00000469534 CAMSAP1Q5T5Y3 1602 aa7.6□□□□□ -1.19
ITGA6-208ENST00000469534 BBXQ8WY36 941 aaPredicted RBP7.6□□□□□ -1.19
ITGA6-208ENST00000469534 EMILIN3Q9NT22 766 aa7.6□□□□□ -1.19
ITGA6-208ENST00000469534 SPHKAPQ2M3C7 1700 aa7.6□□□□□ -1.19
ITGA6-208ENST00000469534 BCORL1Q5H9F3 1711 aa7.6□□□□□ -1.19
ITGA6-208ENST00000469534 ABCC3O15438 1527 aa7.59□□□□□ -1.19
ITGA6-208ENST00000469534 FOSBP53539 338 aa7.59□□□□□ -1.19
ITGA6-208ENST00000469534 VWDEQ8N2E2 1590 aa7.59□□□□□ -1.2
ITGA6-208ENST00000469534 UGGT1Q9NYU2 1555 aa7.59□□□□□ -1.2
ITGA6-208ENST00000469534 WASHC2CQ9Y4E1 1318 aa7.58□□□□□ -1.2
ITGA6-208ENST00000469534 EVI5O60447 810 aa7.58□□□□□ -1.2
ITGA6-208ENST00000469534 BCL2L12Q9HB09 334 aa7.58□□□□□ -1.2
ITGA6-208ENST00000469534 FER1L4A9Z1Z3 1794 aa7.58□□□□□ -1.2
ITGA6-208ENST00000469534 ANKRD30BQ9BXX2 1392 aa7.58□□□□□ -1.2
ITGA6-208ENST00000469534 CLTCL1P53675 1640 aa7.57□□□□□ -1.2
ITGA6-208ENST00000469534 ZEB1P37275 1124 aaPredicted RBP7.57□□□□□ -1.2
ITGA6-208ENST00000469534 AMER1Q5JTC6 1135 aaPredicted RBP7.57□□□□□ -1.2
ITGA6-208ENST00000469534 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
ITGA6-208ENST00000469534 KCNK17Q96T54 332 aa7.57□□□□□ -1.2
ITGA6-208ENST00000469534 REREQ9P2R6 1566 aa7.57□□□□□ -1.2
ITGA6-208ENST00000469534 EFCAB6Q5THR3 1501 aa7.57□□□□□ -1.2
ITGA6-208ENST00000469534 RIMS1Q86UR5 1692 aaKnown RBP7.57□□□□□ -1.2
ITGA6-208ENST00000469534 MAP3K9P80192 1104 aa7.56□□□□□ -1.2
ITGA6-208ENST00000469534 KCTD12Q96CX2 325 aaKnown RBP7.56□□□□□ -1.2
ITGA6-208ENST00000469534 STAC3Q96MF2 364 aa7.56□□□□□ -1.2
ITGA6-208ENST00000469534 MYO5BQ9ULV0 1848 aa7.56□□□□□ -1.2
ITGA6-208ENST00000469534 MROH2AA6NES4 1674 aa7.56□□□□□ -1.2
ITGA6-208ENST00000469534 ZC3H13Q5T200 1668 aaKnown RBP7.56□□□□□ -1.2
ITGA6-208ENST00000469534 AGLP35573 1532 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms