RNA–Protein interactions for RNA: ENST00000469312.6

LINC01140-203, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 5 BASIC

Gene LINC01140, Length 1,298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-203ENST00000469312 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
LINC01140-203ENST00000469312 YTHDC2Q9H6S0 1430 aaKnown RBP17.08■□□□□ 0.32
LINC01140-203ENST00000469312 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
LINC01140-203ENST00000469312 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
LINC01140-203ENST00000469312 TECPR2O15040 1411 aa17.07■□□□□ 0.32
LINC01140-203ENST00000469312 MST1RQ04912 1400 aa17.06■□□□□ 0.32
LINC01140-203ENST00000469312 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
LINC01140-203ENST00000469312 MED1Q15648 1581 aaPredicted RBP17.06■□□□□ 0.32
LINC01140-203ENST00000469312 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
LINC01140-203ENST00000469312 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
LINC01140-203ENST00000469312 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
LINC01140-203ENST00000469312 AHDC1Q5TGY3 1603 aaPredicted RBP17.03■□□□□ 0.32
LINC01140-203ENST00000469312 ABCC11Q96J66 1382 aa17.03■□□□□ 0.32
LINC01140-203ENST00000469312 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
LINC01140-203ENST00000469312 CLSPNQ9HAW4 1339 aa17.03■□□□□ 0.32
LINC01140-203ENST00000469312 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
LINC01140-203ENST00000469312 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
LINC01140-203ENST00000469312 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.32
LINC01140-203ENST00000469312 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
LINC01140-203ENST00000469312 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.31
LINC01140-203ENST00000469312 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
LINC01140-203ENST00000469312 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
LINC01140-203ENST00000469312 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
LINC01140-203ENST00000469312 BRINP3Q76B58 766 aa17■□□□□ 0.31
LINC01140-203ENST00000469312 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
LINC01140-203ENST00000469312 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
LINC01140-203ENST00000469312 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
LINC01140-203ENST00000469312 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
LINC01140-203ENST00000469312 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC01140-203ENST00000469312 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
LINC01140-203ENST00000469312 SIRT1Q96EB6 747 aa16.96■□□□□ 0.31
LINC01140-203ENST00000469312 PRAM1Q96QH2 718 aa16.96■□□□□ 0.31
LINC01140-203ENST00000469312 SHPRHQ149N8 1683 aa16.95■□□□□ 0.3
LINC01140-203ENST00000469312 POGKQ9P215 609 aa16.95■□□□□ 0.3
LINC01140-203ENST00000469312 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
LINC01140-203ENST00000469312 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
LINC01140-203ENST00000469312 NUTM2FA1L443 756 aa16.94■□□□□ 0.3
LINC01140-203ENST00000469312 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
LINC01140-203ENST00000469312 RGPD8O14715 1765 aaPredicted RBP16.94■□□□□ 0.3
LINC01140-203ENST00000469312 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
LINC01140-203ENST00000469312 JCADQ9P266 1359 aa16.93■□□□□ 0.3
LINC01140-203ENST00000469312 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
LINC01140-203ENST00000469312 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
LINC01140-203ENST00000469312 ORAI2Q96SN7 254 aa16.92■□□□□ 0.3
LINC01140-203ENST00000469312 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
LINC01140-203ENST00000469312 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
LINC01140-203ENST00000469312 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
LINC01140-203ENST00000469312 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
LINC01140-203ENST00000469312 MINK1Q8N4C8 1332 aaPredicted RBP16.89■□□□□ 0.29
LINC01140-203ENST00000469312 USP32Q8NFA0 1604 aa16.88■□□□□ 0.29
LINC01140-203ENST00000469312 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
LINC01140-203ENST00000469312 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
LINC01140-203ENST00000469312 QRICH2Q9H0J4 1663 aa16.87■□□□□ 0.29
LINC01140-203ENST00000469312 LRP6O75581 1613 aa16.85■□□□□ 0.29
LINC01140-203ENST00000469312 TULP4Q9NRJ4 1543 aa16.85■□□□□ 0.29
LINC01140-203ENST00000469312 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
LINC01140-203ENST00000469312 SPATA31A6Q5VVP1 1343 aa16.84■□□□□ 0.29
LINC01140-203ENST00000469312 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
LINC01140-203ENST00000469312 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
LINC01140-203ENST00000469312 PXDNQ92626 1479 aa16.84■□□□□ 0.29
LINC01140-203ENST00000469312 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
LINC01140-203ENST00000469312 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.28
LINC01140-203ENST00000469312 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
LINC01140-203ENST00000469312 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.28
LINC01140-203ENST00000469312 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
LINC01140-203ENST00000469312 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
LINC01140-203ENST00000469312 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
LINC01140-203ENST00000469312 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
LINC01140-203ENST00000469312 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
LINC01140-203ENST00000469312 FOXO3O43524 673 aa16.81■□□□□ 0.28
LINC01140-203ENST00000469312 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
LINC01140-203ENST00000469312 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
LINC01140-203ENST00000469312 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
LINC01140-203ENST00000469312 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
LINC01140-203ENST00000469312 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
LINC01140-203ENST00000469312 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
LINC01140-203ENST00000469312 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
LINC01140-203ENST00000469312 NBPF8Q3BBV2 869 aa16.79■□□□□ 0.28
LINC01140-203ENST00000469312 ATP7BP35670 1465 aa16.79■□□□□ 0.28
LINC01140-203ENST00000469312 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
LINC01140-203ENST00000469312 RALGAPBQ86X10 1494 aa16.78■□□□□ 0.28
LINC01140-203ENST00000469312 PRR36Q9H6K5 1346 aa16.77■□□□□ 0.28
LINC01140-203ENST00000469312 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
LINC01140-203ENST00000469312 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
LINC01140-203ENST00000469312 MARF1Q9Y4F3 1742 aaKnown RBP16.74■□□□□ 0.27
LINC01140-203ENST00000469312 KRT28Q7Z3Y7 464 aa16.74■□□□□ 0.27
LINC01140-203ENST00000469312 CDK19Q9BWU1 502 aa16.74■□□□□ 0.27
LINC01140-203ENST00000469312 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
LINC01140-203ENST00000469312 RGS17Q9UGC6 210 aaPredicted RBP16.74■□□□□ 0.27
LINC01140-203ENST00000469312 GPRASP1Q5JY77 1395 aa16.74■□□□□ 0.27
LINC01140-203ENST00000469312 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
LINC01140-203ENST00000469312 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
LINC01140-203ENST00000469312 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
LINC01140-203ENST00000469312 PSME1Q06323 249 aa16.72■□□□□ 0.27
LINC01140-203ENST00000469312 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
LINC01140-203ENST00000469312 ADAMTS2O95450 1211 aa16.71■□□□□ 0.27
LINC01140-203ENST00000469312 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
LINC01140-203ENST00000469312 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
LINC01140-203ENST00000469312 ALS2Q96Q42 1657 aa16.71■□□□□ 0.27
LINC01140-203ENST00000469312 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms