RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 C1orf167Q5SNV9 1468 aa21.06■□□□□ 0.96
COL27A1-203ENST00000468565 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
COL27A1-203ENST00000468565 DCAF11Q8TEB1 546 aa21.06■□□□□ 0.96
COL27A1-203ENST00000468565 SIRT1Q96EB6 747 aa21.06■□□□□ 0.96
COL27A1-203ENST00000468565 DLC1Q96QB1 1528 aa21.04■□□□□ 0.96
COL27A1-203ENST00000468565 ILDR2Q71H61 639 aa21.04■□□□□ 0.96
COL27A1-203ENST00000468565 WAPLQ7Z5K2 1190 aa21.03■□□□□ 0.96
COL27A1-203ENST00000468565 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.96
COL27A1-203ENST00000468565 FMN2Q9NZ56 1722 aa21.02■□□□□ 0.96
COL27A1-203ENST00000468565 PLEKHH1Q9ULM0 1364 aa21.02■□□□□ 0.95
COL27A1-203ENST00000468565 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
COL27A1-203ENST00000468565 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-203ENST00000468565 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
COL27A1-203ENST00000468565 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-203ENST00000468565 ORAI2Q96SN7 254 aa20.96■□□□□ 0.95
COL27A1-203ENST00000468565 ADGRB2O60241 1585 aa20.95■□□□□ 0.94
COL27A1-203ENST00000468565 RGPD8O14715 1765 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-203ENST00000468565 ARHGEF28Q8N1W1 1705 aaKnown RBP20.94■□□□□ 0.94
COL27A1-203ENST00000468565 KIF1AQ12756 1690 aa20.94■□□□□ 0.94
COL27A1-203ENST00000468565 LRRC59Q96AG4 307 aaKnown RBP20.94■□□□□ 0.94
COL27A1-203ENST00000468565 PRAM1Q96QH2 718 aa20.94■□□□□ 0.94
COL27A1-203ENST00000468565 LRP6O75581 1613 aa20.92■□□□□ 0.94
COL27A1-203ENST00000468565 SOS2Q07890 1332 aaPredicted RBP20.92■□□□□ 0.94
COL27A1-203ENST00000468565 DDX17Q92841 729 aaKnown RBP20.92■□□□□ 0.94
COL27A1-203ENST00000468565 ESCO1Q5FWF5 840 aa20.9■□□□□ 0.94
COL27A1-203ENST00000468565 POGKQ9P215 609 aa20.9■□□□□ 0.94
COL27A1-203ENST00000468565 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
COL27A1-203ENST00000468565 RGS17Q9UGC6 210 aaPredicted RBP20.9■□□□□ 0.94
COL27A1-203ENST00000468565 PNPLA6Q8IY17 1366 aa20.88■□□□□ 0.93
COL27A1-203ENST00000468565 NPHP3Q7Z494 1330 aa20.88■□□□□ 0.93
COL27A1-203ENST00000468565 SOCS7O14512 581 aa20.87■□□□□ 0.93
COL27A1-203ENST00000468565 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL27A1-203ENST00000468565 PXDNQ92626 1479 aa20.87■□□□□ 0.93
COL27A1-203ENST00000468565 USP32Q8NFA0 1604 aa20.87■□□□□ 0.93
COL27A1-203ENST00000468565 COL22A1Q8NFW1 1626 aaPredicted RBP20.87■□□□□ 0.93
COL27A1-203ENST00000468565 NUTM2FA1L443 756 aa20.86■□□□□ 0.93
COL27A1-203ENST00000468565 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
COL27A1-203ENST00000468565 ANKARQ7Z5J8 1434 aa20.85■□□□□ 0.93
COL27A1-203ENST00000468565 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
COL27A1-203ENST00000468565 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.93
COL27A1-203ENST00000468565 MEX3CQ5U5Q3 659 aaKnown RBP20.83■□□□□ 0.93
COL27A1-203ENST00000468565 TRPM1Q7Z4N2 1603 aa20.82■□□□□ 0.92
COL27A1-203ENST00000468565 FOXO3O43524 673 aa20.82■□□□□ 0.92
COL27A1-203ENST00000468565 TULP4Q9NRJ4 1543 aa20.81■□□□□ 0.92
COL27A1-203ENST00000468565 NUTM2BA6NNL0 878 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-203ENST00000468565 NUTM2EB1AL46 878 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-203ENST00000468565 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
COL27A1-203ENST00000468565 NUTM2AQ8IVF1 878 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-203ENST00000468565 MINK1Q8N4C8 1332 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-203ENST00000468565 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
COL27A1-203ENST00000468565 NBPF1Q3BBV0 1214 aa20.79■□□□□ 0.92
COL27A1-203ENST00000468565 PHF8Q9UPP1 1060 aa20.79■□□□□ 0.92
COL27A1-203ENST00000468565 POTEAQ6S8J7 498 aa20.78■□□□□ 0.92
COL27A1-203ENST00000468565 HIRIP3Q9BW71 556 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-203ENST00000468565 WASLO00401 505 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-203ENST00000468565 MARF1Q9Y4F3 1742 aaKnown RBP20.78■□□□□ 0.92
COL27A1-203ENST00000468565 ZNF772Q68DY9 489 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-203ENST00000468565 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-203ENST00000468565 QRICH2Q9H0J4 1663 aa20.75■□□□□ 0.91
COL27A1-203ENST00000468565 SPATA31A3Q5VYP0 1347 aa20.74■□□□□ 0.91
COL27A1-203ENST00000468565 PRR36Q9H6K5 1346 aa20.74■□□□□ 0.91
COL27A1-203ENST00000468565 KRT28Q7Z3Y7 464 aa20.74■□□□□ 0.91
COL27A1-203ENST00000468565 TOPAZ1Q8N9V7 1692 aa20.73■□□□□ 0.91
COL27A1-203ENST00000468565 ATP7BP35670 1465 aa20.73■□□□□ 0.91
COL27A1-203ENST00000468565 PSME1Q06323 249 aa20.72■□□□□ 0.91
COL27A1-203ENST00000468565 TRPM3Q9HCF6 1732 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-203ENST00000468565 TNS3Q68CZ2 1445 aa20.72■□□□□ 0.91
COL27A1-203ENST00000468565 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
COL27A1-203ENST00000468565 AFF2P51816 1311 aa20.71■□□□□ 0.91
COL27A1-203ENST00000468565 CENPJQ9HC77 1338 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-203ENST00000468565 PMFBP1Q8TBY8 1022 aa20.7■□□□□ 0.9
COL27A1-203ENST00000468565 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
COL27A1-203ENST00000468565 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
COL27A1-203ENST00000468565 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
COL27A1-203ENST00000468565 ADAMTS2O95450 1211 aa20.68■□□□□ 0.9
COL27A1-203ENST00000468565 ABCA3Q99758 1704 aa20.68■□□□□ 0.9
COL27A1-203ENST00000468565 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
COL27A1-203ENST00000468565 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
COL27A1-203ENST00000468565 NUDT16Q96DE0 195 aaKnown RBP20.67■□□□□ 0.9
COL27A1-203ENST00000468565 GPRASP1Q5JY77 1395 aa20.67■□□□□ 0.9
COL27A1-203ENST00000468565 PPP4R3CPQ6ZMV5 832 aa20.66■□□□□ 0.9
COL27A1-203ENST00000468565 ARHGEF10O15013 1369 aa20.66■□□□□ 0.9
COL27A1-203ENST00000468565 NBPF8Q3BBV2 869 aa20.65■□□□□ 0.9
COL27A1-203ENST00000468565 NGLY1Q96IV0 654 aa20.65■□□□□ 0.9
COL27A1-203ENST00000468565 RALGAPBQ86X10 1494 aa20.63■□□□□ 0.89
COL27A1-203ENST00000468565 CDK12Q9NYV4 1490 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-203ENST00000468565 FNBP4Q8N3X1 1017 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-203ENST00000468565 NGDNQ8NEJ9 315 aaKnown RBP20.63■□□□□ 0.89
COL27A1-203ENST00000468565 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.62■□□□□ 0.89
COL27A1-203ENST00000468565 CCDC61Q9Y6R9 512 aa20.62■□□□□ 0.89
COL27A1-203ENST00000468565 RXRBP28702 533 aa20.61■□□□□ 0.89
COL27A1-203ENST00000468565 POLR3AO14802 1390 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-203ENST00000468565 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
COL27A1-203ENST00000468565 PLEKHG3A1L390 1219 aa20.59■□□□□ 0.89
COL27A1-203ENST00000468565 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
COL27A1-203ENST00000468565 USP21Q9UK80 565 aa20.59■□□□□ 0.89
COL27A1-203ENST00000468565 SRPK2P78362 688 aaKnown RBP20.59■□□□□ 0.89
COL27A1-203ENST00000468565 QTRT2Q9H974 415 aaKnown RBP20.59■□□□□ 0.89
COL27A1-203ENST00000468565 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.88
COL27A1-203ENST00000468565 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms