RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 CCER1Q8TC90 406 aaPredicted RBP21.37■■□□□ 1.01
PCOLCE-204ENST00000468214 WAPLQ7Z5K2 1190 aa21.36■■□□□ 1.01
PCOLCE-204ENST00000468214 C1orf167Q5SNV9 1468 aa21.36■■□□□ 1.01
PCOLCE-204ENST00000468214 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
PCOLCE-204ENST00000468214 STAC3Q96MF2 364 aa21.33■■□□□ 1.01
PCOLCE-204ENST00000468214 PLEKHH1Q9ULM0 1364 aa21.33■■□□□ 1
PCOLCE-204ENST00000468214 KIAA1210Q9ULL0 1709 aa21.32■■□□□ 1
PCOLCE-204ENST00000468214 CDC42BPGQ6DT37 1551 aa21.32■■□□□ 1
PCOLCE-204ENST00000468214 NHSL1Q5SYE7 1610 aa21.32■■□□□ 1
PCOLCE-204ENST00000468214 TONSLQ96HA7 1378 aa21.31■■□□□ 1
PCOLCE-204ENST00000468214 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
PCOLCE-204ENST00000468214 SPATA31A6Q5VVP1 1343 aa21.29■■□□□ 1
PCOLCE-204ENST00000468214 SIRT1Q96EB6 747 aa21.29■■□□□ 1
PCOLCE-204ENST00000468214 ORAI2Q96SN7 254 aa21.29■■□□□ 1
PCOLCE-204ENST00000468214 SHPRHQ149N8 1683 aa21.28■■□□□ 1
PCOLCE-204ENST00000468214 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
PCOLCE-204ENST00000468214 NUTM2FA1L443 756 aa21.27■■□□□ 1
PCOLCE-204ENST00000468214 SAFB2Q14151 953 aaKnown RBP eCLIP21.27■■□□□ 1
PCOLCE-204ENST00000468214 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
PCOLCE-204ENST00000468214 LRRC59Q96AG4 307 aaKnown RBP21.27■■□□□ 1
PCOLCE-204ENST00000468214 POGKQ9P215 609 aa21.27■■□□□ 1
PCOLCE-204ENST00000468214 TRPM1Q7Z4N2 1603 aa21.26■□□□□ 0.99
PCOLCE-204ENST00000468214 MEX3CQ5U5Q3 659 aaKnown RBP21.26■□□□□ 0.99
PCOLCE-204ENST00000468214 PRAM1Q96QH2 718 aa21.26■□□□□ 0.99
PCOLCE-204ENST00000468214 ADGRB1O14514 1584 aa21.25■□□□□ 0.99
PCOLCE-204ENST00000468214 NUTM2BA6NNL0 878 aaPredicted RBP21.24■□□□□ 0.99
PCOLCE-204ENST00000468214 NUTM2EB1AL46 878 aaPredicted RBP21.24■□□□□ 0.99
PCOLCE-204ENST00000468214 NUTM2AQ8IVF1 878 aaPredicted RBP21.24■□□□□ 0.99
PCOLCE-204ENST00000468214 TRAK1Q9UPV9 953 aa21.24■□□□□ 0.99
PCOLCE-204ENST00000468214 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
PCOLCE-204ENST00000468214 RGS17Q9UGC6 210 aaPredicted RBP21.23■□□□□ 0.99
PCOLCE-204ENST00000468214 LRP6O75581 1613 aa21.22■□□□□ 0.99
PCOLCE-204ENST00000468214 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
PCOLCE-204ENST00000468214 NPHP3Q7Z494 1330 aa21.21■□□□□ 0.99
PCOLCE-204ENST00000468214 SOS2Q07890 1332 aaPredicted RBP21.2■□□□□ 0.98
PCOLCE-204ENST00000468214 PNPLA6Q8IY17 1366 aa21.2■□□□□ 0.98
PCOLCE-204ENST00000468214 FOXO3O43524 673 aa21.18■□□□□ 0.98
PCOLCE-204ENST00000468214 ARHGEF28Q8N1W1 1705 aaKnown RBP21.18■□□□□ 0.98
PCOLCE-204ENST00000468214 MINK1Q8N4C8 1332 aaPredicted RBP21.16■□□□□ 0.98
PCOLCE-204ENST00000468214 XPCQ01831 940 aaPredicted RBP21.16■□□□□ 0.98
PCOLCE-204ENST00000468214 POTEAQ6S8J7 498 aa21.15■□□□□ 0.98
PCOLCE-204ENST00000468214 HIRIP3Q9BW71 556 aaPredicted RBP21.15■□□□□ 0.98
PCOLCE-204ENST00000468214 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
PCOLCE-204ENST00000468214 ADGRB2O60241 1585 aa21.14■□□□□ 0.97
PCOLCE-204ENST00000468214 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
PCOLCE-204ENST00000468214 PXDNQ92626 1479 aa21.13■□□□□ 0.97
PCOLCE-204ENST00000468214 RGPD8O14715 1765 aaPredicted RBP21.13■□□□□ 0.97
PCOLCE-204ENST00000468214 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
PCOLCE-204ENST00000468214 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
PCOLCE-204ENST00000468214 EIF3AQ14152 1382 aaKnown RBP21.11■□□□□ 0.97
PCOLCE-204ENST00000468214 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
PCOLCE-204ENST00000468214 ANKARQ7Z5J8 1434 aa21.1■□□□□ 0.97
PCOLCE-204ENST00000468214 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
PCOLCE-204ENST00000468214 NBPF1Q3BBV0 1214 aa21.09■□□□□ 0.97
PCOLCE-204ENST00000468214 NBPF8Q3BBV2 869 aa21.09■□□□□ 0.97
PCOLCE-204ENST00000468214 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
PCOLCE-204ENST00000468214 AFF2P51816 1311 aa21.07■□□□□ 0.96
PCOLCE-204ENST00000468214 WASLO00401 505 aaPredicted RBP21.07■□□□□ 0.96
PCOLCE-204ENST00000468214 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
PCOLCE-204ENST00000468214 ROCK2O75116 1388 aaKnown RBP21.07■□□□□ 0.96
PCOLCE-204ENST00000468214 QRICH2Q9H0J4 1663 aa21.06■□□□□ 0.96
PCOLCE-204ENST00000468214 TULP4Q9NRJ4 1543 aa21.06■□□□□ 0.96
PCOLCE-204ENST00000468214 PSME1Q06323 249 aa21.06■□□□□ 0.96
PCOLCE-204ENST00000468214 PMFBP1Q8TBY8 1022 aa21.06■□□□□ 0.96
PCOLCE-204ENST00000468214 USP32Q8NFA0 1604 aa21.05■□□□□ 0.96
PCOLCE-204ENST00000468214 COL22A1Q8NFW1 1626 aaPredicted RBP21.05■□□□□ 0.96
PCOLCE-204ENST00000468214 NGLY1Q96IV0 654 aa21.04■□□□□ 0.96
PCOLCE-204ENST00000468214 SPATA31A3Q5VYP0 1347 aa21.04■□□□□ 0.96
PCOLCE-204ENST00000468214 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
PCOLCE-204ENST00000468214 GPRASP1Q5JY77 1395 aa21.01■□□□□ 0.95
PCOLCE-204ENST00000468214 LMOD2Q6P5Q4 547 aa21.01■□□□□ 0.95
PCOLCE-204ENST00000468214 TNS3Q68CZ2 1445 aa21.01■□□□□ 0.95
PCOLCE-204ENST00000468214 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
PCOLCE-204ENST00000468214 RXRBP28702 533 aa20.99■□□□□ 0.95
PCOLCE-204ENST00000468214 NGDNQ8NEJ9 315 aaKnown RBP20.99■□□□□ 0.95
PCOLCE-204ENST00000468214 CDK19Q9BWU1 502 aa20.99■□□□□ 0.95
PCOLCE-204ENST00000468214 SBNO1A3KN83 1393 aa20.98■□□□□ 0.95
PCOLCE-204ENST00000468214 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
PCOLCE-204ENST00000468214 NUDT16Q96DE0 195 aaKnown RBP20.98■□□□□ 0.95
PCOLCE-204ENST00000468214 ITSN1Q15811 1721 aa20.98■□□□□ 0.95
PCOLCE-204ENST00000468214 ATP7BP35670 1465 aa20.97■□□□□ 0.95
PCOLCE-204ENST00000468214 PLEKHG5O94827 1062 aa20.97■□□□□ 0.95
PCOLCE-204ENST00000468214 ARHGEF10O15013 1369 aa20.97■□□□□ 0.95
PCOLCE-204ENST00000468214 QTRT2Q9H974 415 aaKnown RBP20.96■□□□□ 0.95
PCOLCE-204ENST00000468214 CARD11Q9BXL7 1154 aa20.95■□□□□ 0.94
PCOLCE-204ENST00000468214 USP21Q9UK80 565 aa20.95■□□□□ 0.94
PCOLCE-204ENST00000468214 SRPK2P78362 688 aaKnown RBP20.94■□□□□ 0.94
PCOLCE-204ENST00000468214 MARF1Q9Y4F3 1742 aaKnown RBP20.93■□□□□ 0.94
PCOLCE-204ENST00000468214 PAK3O75914 559 aaPredicted RBP20.92■□□□□ 0.94
PCOLCE-204ENST00000468214 FNBP4Q8N3X1 1017 aaPredicted RBP20.92■□□□□ 0.94
PCOLCE-204ENST00000468214 CABLES1Q8TDN4 633 aa20.92■□□□□ 0.94
PCOLCE-204ENST00000468214 CCDC61Q9Y6R9 512 aa20.92■□□□□ 0.94
PCOLCE-204ENST00000468214 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
PCOLCE-204ENST00000468214 TRPM3Q9HCF6 1732 aaPredicted RBP20.91■□□□□ 0.94
PCOLCE-204ENST00000468214 TRPC5Q9UL62 973 aaPredicted RBP20.91■□□□□ 0.94
PCOLCE-204ENST00000468214 CDK12Q9NYV4 1490 aaPredicted RBP20.89■□□□□ 0.94
PCOLCE-204ENST00000468214 CABP2Q9NPB3 220 aa20.89■□□□□ 0.93
PCOLCE-204ENST00000468214 TOPAZ1Q8N9V7 1692 aa20.89■□□□□ 0.93
PCOLCE-204ENST00000468214 ALS2Q96Q42 1657 aa20.87■□□□□ 0.93
PCOLCE-204ENST00000468214 ACEP12821 1306 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms