RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TECPR2O15040 1411 aa16.78■□□□□ 0.28
CDHR3-205ENST00000468143 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
CDHR3-205ENST00000468143 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
CDHR3-205ENST00000468143 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
CDHR3-205ENST00000468143 TRAK1Q9UPV9 953 aa16.77■□□□□ 0.28
CDHR3-205ENST00000468143 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
CDHR3-205ENST00000468143 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
CDHR3-205ENST00000468143 POGKQ9P215 609 aa16.76■□□□□ 0.27
CDHR3-205ENST00000468143 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
CDHR3-205ENST00000468143 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
CDHR3-205ENST00000468143 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
CDHR3-205ENST00000468143 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
CDHR3-205ENST00000468143 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
CDHR3-205ENST00000468143 RGS17Q9UGC6 210 aaPredicted RBP16.74■□□□□ 0.27
CDHR3-205ENST00000468143 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
CDHR3-205ENST00000468143 LAMC1P11047 1609 aa16.72■□□□□ 0.27
CDHR3-205ENST00000468143 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
CDHR3-205ENST00000468143 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
CDHR3-205ENST00000468143 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
CDHR3-205ENST00000468143 FOXO3O43524 673 aa16.7■□□□□ 0.26
CDHR3-205ENST00000468143 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
CDHR3-205ENST00000468143 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
CDHR3-205ENST00000468143 L3MBTL2Q969R5 705 aa16.7■□□□□ 0.26
CDHR3-205ENST00000468143 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
CDHR3-205ENST00000468143 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
CDHR3-205ENST00000468143 CDC42BPGQ6DT37 1551 aa16.69■□□□□ 0.26
CDHR3-205ENST00000468143 NBPF1Q3BBV0 1214 aa16.69■□□□□ 0.26
CDHR3-205ENST00000468143 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
CDHR3-205ENST00000468143 LRP6O75581 1613 aa16.67■□□□□ 0.26
CDHR3-205ENST00000468143 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
CDHR3-205ENST00000468143 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
CDHR3-205ENST00000468143 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
CDHR3-205ENST00000468143 PNPLA6Q8IY17 1366 aa16.65■□□□□ 0.26
CDHR3-205ENST00000468143 NPHP3Q7Z494 1330 aa16.65■□□□□ 0.26
CDHR3-205ENST00000468143 SHPRHQ149N8 1683 aa16.63■□□□□ 0.25
CDHR3-205ENST00000468143 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
CDHR3-205ENST00000468143 PHF8Q9UPP1 1060 aa16.63■□□□□ 0.25
CDHR3-205ENST00000468143 ADAMTS2O95450 1211 aa16.62■□□□□ 0.25
CDHR3-205ENST00000468143 KRT28Q7Z3Y7 464 aa16.62■□□□□ 0.25
CDHR3-205ENST00000468143 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
CDHR3-205ENST00000468143 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
CDHR3-205ENST00000468143 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
CDHR3-205ENST00000468143 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
CDHR3-205ENST00000468143 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
CDHR3-205ENST00000468143 PXDNQ92626 1479 aa16.59■□□□□ 0.25
CDHR3-205ENST00000468143 PSME1Q06323 249 aa16.58■□□□□ 0.24
CDHR3-205ENST00000468143 AFF2P51816 1311 aa16.57■□□□□ 0.24
CDHR3-205ENST00000468143 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
CDHR3-205ENST00000468143 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
CDHR3-205ENST00000468143 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
CDHR3-205ENST00000468143 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
CDHR3-205ENST00000468143 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
CDHR3-205ENST00000468143 ANKARQ7Z5J8 1434 aa16.55■□□□□ 0.24
CDHR3-205ENST00000468143 SPATA31A3Q5VYP0 1347 aa16.55■□□□□ 0.24
CDHR3-205ENST00000468143 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
CDHR3-205ENST00000468143 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
CDHR3-205ENST00000468143 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
CDHR3-205ENST00000468143 ARHGEF28Q8N1W1 1705 aaKnown RBP16.54■□□□□ 0.24
CDHR3-205ENST00000468143 KIAA1210Q9ULL0 1709 aa16.54■□□□□ 0.24
CDHR3-205ENST00000468143 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
CDHR3-205ENST00000468143 USP32Q8NFA0 1604 aa16.54■□□□□ 0.24
CDHR3-205ENST00000468143 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-205ENST00000468143 NGDNQ8NEJ9 315 aaKnown RBP16.53■□□□□ 0.24
CDHR3-205ENST00000468143 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
CDHR3-205ENST00000468143 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
CDHR3-205ENST00000468143 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
CDHR3-205ENST00000468143 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
CDHR3-205ENST00000468143 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
CDHR3-205ENST00000468143 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.24
CDHR3-205ENST00000468143 RXRBP28702 533 aa16.5■□□□□ 0.23
CDHR3-205ENST00000468143 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
CDHR3-205ENST00000468143 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
CDHR3-205ENST00000468143 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
CDHR3-205ENST00000468143 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
CDHR3-205ENST00000468143 HAP1P54257 671 aaPredicted RBP16.49■□□□□ 0.23
CDHR3-205ENST00000468143 USP21Q9UK80 565 aa16.49■□□□□ 0.23
CDHR3-205ENST00000468143 GPRASP1Q5JY77 1395 aa16.49■□□□□ 0.23
CDHR3-205ENST00000468143 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
CDHR3-205ENST00000468143 SBNO1A3KN83 1393 aa16.48■□□□□ 0.23
CDHR3-205ENST00000468143 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
CDHR3-205ENST00000468143 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
CDHR3-205ENST00000468143 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
CDHR3-205ENST00000468143 ATP7BP35670 1465 aa16.47■□□□□ 0.23
CDHR3-205ENST00000468143 FNBP4Q8N3X1 1017 aaPredicted RBP16.46■□□□□ 0.23
CDHR3-205ENST00000468143 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
CDHR3-205ENST00000468143 ACEP12821 1306 aa16.45■□□□□ 0.22
CDHR3-205ENST00000468143 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
CDHR3-205ENST00000468143 PLEKHG3A1L390 1219 aa16.43■□□□□ 0.22
CDHR3-205ENST00000468143 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
CDHR3-205ENST00000468143 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
CDHR3-205ENST00000468143 CABP1Q9NZU7 370 aa16.42■□□□□ 0.22
CDHR3-205ENST00000468143 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
CDHR3-205ENST00000468143 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
CDHR3-205ENST00000468143 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
CDHR3-205ENST00000468143 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
CDHR3-205ENST00000468143 BCL9LQ86UU0 1499 aa16.4■□□□□ 0.22
CDHR3-205ENST00000468143 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
CDHR3-205ENST00000468143 FAM83GA6ND36 823 aa16.39■□□□□ 0.21
CDHR3-205ENST00000468143 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
CDHR3-205ENST00000468143 UNC5CLQ8IV45 518 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms