RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 STAC3Q96MF2 364 aa33.04■■■□□ 2.88
SSR2-204ENST00000467041 SPATA31A6Q5VVP1 1343 aa33.03■■■□□ 2.88
SSR2-204ENST00000467041 KDM2AQ9Y2K7 1162 aa33.03■■■□□ 2.88
SSR2-204ENST00000467041 PLEKHH1Q9ULM0 1364 aa33.03■■■□□ 2.88
SSR2-204ENST00000467041 ORAI2Q96SN7 254 aa33.02■■■□□ 2.88
SSR2-204ENST00000467041 CDC42BPGQ6DT37 1551 aa33.01■■■□□ 2.88
SSR2-204ENST00000467041 DDX17Q92841 729 aaKnown RBP33.01■■■□□ 2.87
SSR2-204ENST00000467041 LRRC59Q96AG4 307 aaKnown RBP33■■■□□ 2.87
SSR2-204ENST00000467041 SHPRHQ149N8 1683 aa32.99■■■□□ 2.87
SSR2-204ENST00000467041 LRP6O75581 1613 aa32.94■■■□□ 2.86
SSR2-204ENST00000467041 ADGRB1O14514 1584 aa32.92■■■□□ 2.86
SSR2-204ENST00000467041 ESCO1Q5FWF5 840 aa32.92■■■□□ 2.86
SSR2-204ENST00000467041 SOS2Q07890 1332 aaPredicted RBP32.92■■■□□ 2.86
SSR2-204ENST00000467041 PRAM1Q96QH2 718 aa32.9■■■□□ 2.86
SSR2-204ENST00000467041 DLC1Q96QB1 1528 aa32.89■■■□□ 2.86
SSR2-204ENST00000467041 POTEAQ6S8J7 498 aa32.89■■■□□ 2.86
SSR2-204ENST00000467041 NUTM2FA1L443 756 aa32.88■■■□□ 2.85
SSR2-204ENST00000467041 MEX3CQ5U5Q3 659 aaKnown RBP32.88■■■□□ 2.85
SSR2-204ENST00000467041 PNPLA6Q8IY17 1366 aa32.86■■■□□ 2.85
SSR2-204ENST00000467041 NUTM2BA6NNL0 878 aaPredicted RBP32.86■■■□□ 2.85
SSR2-204ENST00000467041 NUTM2EB1AL46 878 aaPredicted RBP32.86■■■□□ 2.85
SSR2-204ENST00000467041 NUTM2AQ8IVF1 878 aaPredicted RBP32.86■■■□□ 2.85
SSR2-204ENST00000467041 POGKQ9P215 609 aa32.86■■■□□ 2.85
SSR2-204ENST00000467041 TRAK1Q9UPV9 953 aa32.85■■■□□ 2.85
SSR2-204ENST00000467041 NPHP3Q7Z494 1330 aa32.84■■■□□ 2.85
SSR2-204ENST00000467041 SAFB2Q14151 953 aaKnown RBP eCLIP32.84■■■□□ 2.85
SSR2-204ENST00000467041 FMN2Q9NZ56 1722 aa32.84■■■□□ 2.85
SSR2-204ENST00000467041 FOXO3O43524 673 aa32.81■■■□□ 2.84
SSR2-204ENST00000467041 ZNF772Q68DY9 489 aaPredicted RBP32.76■■■□□ 2.83
SSR2-204ENST00000467041 PXDNQ92626 1479 aa32.75■■■□□ 2.83
SSR2-204ENST00000467041 XPCQ01831 940 aaPredicted RBP32.73■■■□□ 2.83
SSR2-204ENST00000467041 PHF8Q9UPP1 1060 aa32.71■■■□□ 2.83
SSR2-204ENST00000467041 ADGRB2O60241 1585 aa32.7■■■□□ 2.83
SSR2-204ENST00000467041 KIF1AQ12756 1690 aa32.7■■■□□ 2.83
SSR2-204ENST00000467041 SIN3AQ96ST3 1273 aa32.7■■■□□ 2.83
SSR2-204ENST00000467041 MINK1Q8N4C8 1332 aaPredicted RBP32.7■■■□□ 2.82
SSR2-204ENST00000467041 RGPD8O14715 1765 aaPredicted RBP32.69■■■□□ 2.82
SSR2-204ENST00000467041 HIRIP3Q9BW71 556 aaPredicted RBP32.69■■■□□ 2.82
SSR2-204ENST00000467041 KIAA1210Q9ULL0 1709 aa32.68■■■□□ 2.82
SSR2-204ENST00000467041 ANKARQ7Z5J8 1434 aa32.68■■■□□ 2.82
SSR2-204ENST00000467041 L3MBTL2Q969R5 705 aa32.67■■■□□ 2.82
SSR2-204ENST00000467041 AFF2P51816 1311 aa32.67■■■□□ 2.82
SSR2-204ENST00000467041 ADAMTS2O95450 1211 aa32.66■■■□□ 2.82
SSR2-204ENST00000467041 C8orf37Q96NL8 207 aa32.66■■■□□ 2.82
SSR2-204ENST00000467041 COL22A1Q8NFW1 1626 aaPredicted RBP32.66■■■□□ 2.82
SSR2-204ENST00000467041 TRIM26Q12899 539 aaPredicted RBP32.65■■■□□ 2.82
SSR2-204ENST00000467041 NBPF1Q3BBV0 1214 aa32.65■■■□□ 2.82
SSR2-204ENST00000467041 KRT28Q7Z3Y7 464 aa32.65■■■□□ 2.82
SSR2-204ENST00000467041 WASLO00401 505 aaPredicted RBP32.64■■■□□ 2.82
SSR2-204ENST00000467041 ARHGEF28Q8N1W1 1705 aaKnown RBP32.63■■■□□ 2.81
SSR2-204ENST00000467041 USP32Q8NFA0 1604 aa32.62■■■□□ 2.81
SSR2-204ENST00000467041 EIF3AQ14152 1382 aaKnown RBP32.62■■■□□ 2.81
SSR2-204ENST00000467041 SPATA31A3Q5VYP0 1347 aa32.62■■■□□ 2.81
SSR2-204ENST00000467041 NEUROD1Q13562 356 aa32.62■■■□□ 2.81
SSR2-204ENST00000467041 NGLY1Q96IV0 654 aa32.61■■■□□ 2.81
SSR2-204ENST00000467041 PSME1Q06323 249 aa32.6■■■□□ 2.81
SSR2-204ENST00000467041 PMFBP1Q8TBY8 1022 aa32.59■■■□□ 2.81
SSR2-204ENST00000467041 PRR36Q9H6K5 1346 aa32.58■■■□□ 2.81
SSR2-204ENST00000467041 TULP4Q9NRJ4 1543 aa32.56■■■□□ 2.8
SSR2-204ENST00000467041 RXRBP28702 533 aa32.56■■■□□ 2.8
SSR2-204ENST00000467041 SBNO1A3KN83 1393 aa32.53■■■□□ 2.8
SSR2-204ENST00000467041 QTRT2Q9H974 415 aaKnown RBP32.52■■■□□ 2.8
SSR2-204ENST00000467041 TNS3Q68CZ2 1445 aa32.51■■■□□ 2.8
SSR2-204ENST00000467041 FNBP4Q8N3X1 1017 aaPredicted RBP32.51■■■□□ 2.79
SSR2-204ENST00000467041 CDK19Q9BWU1 502 aa32.49■■■□□ 2.79
SSR2-204ENST00000467041 NUDT16Q96DE0 195 aaKnown RBP32.48■■■□□ 2.79
SSR2-204ENST00000467041 USP21Q9UK80 565 aa32.48■■■□□ 2.79
SSR2-204ENST00000467041 RBM6P78332 1123 aaKnown RBP32.46■■■□□ 2.79
SSR2-204ENST00000467041 GPRASP1Q5JY77 1395 aa32.45■■■□□ 2.79
SSR2-204ENST00000467041 ATP7BP35670 1465 aa32.45■■■□□ 2.79
SSR2-204ENST00000467041 CDK12Q9NYV4 1490 aaPredicted RBP32.45■■■□□ 2.79
SSR2-204ENST00000467041 CENPJQ9HC77 1338 aaPredicted RBP32.45■■■□□ 2.78
SSR2-204ENST00000467041 ARHGEF10O15013 1369 aa32.45■■■□□ 2.78
SSR2-204ENST00000467041 LMOD2Q6P5Q4 547 aa32.44■■■□□ 2.78
SSR2-204ENST00000467041 NGDNQ8NEJ9 315 aaKnown RBP32.44■■■□□ 2.78
SSR2-204ENST00000467041 MARF1Q9Y4F3 1742 aaKnown RBP32.43■■■□□ 2.78
SSR2-204ENST00000467041 TRPM1Q7Z4N2 1603 aa32.42■■■□□ 2.78
SSR2-204ENST00000467041 TRPC5Q9UL62 973 aaPredicted RBP32.42■■■□□ 2.78
SSR2-204ENST00000467041 CABLES1Q8TDN4 633 aa32.41■■■□□ 2.78
SSR2-204ENST00000467041 CCDC61Q9Y6R9 512 aa32.4■■■□□ 2.78
SSR2-204ENST00000467041 ITSN1Q15811 1721 aa32.39■■■□□ 2.78
SSR2-204ENST00000467041 TRPM3Q9HCF6 1732 aaPredicted RBP32.39■■■□□ 2.78
SSR2-204ENST00000467041 HAP1P54257 671 aaPredicted RBP32.38■■■□□ 2.77
SSR2-204ENST00000467041 BCL9LQ86UU0 1499 aa32.37■■■□□ 2.77
SSR2-204ENST00000467041 ROCK2O75116 1388 aaKnown RBP32.37■■■□□ 2.77
SSR2-204ENST00000467041 NBPF8Q3BBV2 869 aa32.37■■■□□ 2.77
SSR2-204ENST00000467041 ATRNO75882 1429 aa32.35■■■□□ 2.77
SSR2-204ENST00000467041 PLEKHG5O94827 1062 aa32.35■■■□□ 2.77
SSR2-204ENST00000467041 PLEKHG3A1L390 1219 aa32.33■■■□□ 2.77
SSR2-204ENST00000467041 SRPK2P78362 688 aaKnown RBP32.33■■■□□ 2.77
SSR2-204ENST00000467041 ALS2Q96Q42 1657 aa32.33■■■□□ 2.77
SSR2-204ENST00000467041 TONSLQ96HA7 1378 aa32.32■■■□□ 2.77
SSR2-204ENST00000467041 RGS12O14924 1447 aa32.32■■■□□ 2.76
SSR2-204ENST00000467041 POLR3AO14802 1390 aaPredicted RBP32.32■■■□□ 2.76
SSR2-204ENST00000467041 SLIT2O94813 1529 aa32.31■■■□□ 2.76
SSR2-204ENST00000467041 TOPAZ1Q8N9V7 1692 aa32.31■■■□□ 2.76
SSR2-204ENST00000467041 QRICH2Q9H0J4 1663 aa32.31■■■□□ 2.76
SSR2-204ENST00000467041 PAK3O75914 559 aaPredicted RBP32.31■■■□□ 2.76
SSR2-204ENST00000467041 ACEP12821 1306 aa32.3■■■□□ 2.76
SSR2-204ENST00000467041 UNC5CLQ8IV45 518 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms