RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 SIRT1Q96EB6 747 aa27.27■■□□□ 1.96
CHKB-204ENST00000465842 SAFB2Q14151 953 aaKnown RBP eCLIP27.26■■□□□ 1.95
CHKB-204ENST00000465842 PRAM1Q96QH2 718 aa27.26■■□□□ 1.95
CHKB-204ENST00000465842 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
CHKB-204ENST00000465842 AHDC1Q5TGY3 1603 aaPredicted RBP27.25■■□□□ 1.95
CHKB-204ENST00000465842 DLC1Q96QB1 1528 aa27.24■■□□□ 1.95
CHKB-204ENST00000465842 L3MBTL2Q969R5 705 aa27.23■■□□□ 1.95
CHKB-204ENST00000465842 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
CHKB-204ENST00000465842 JCADQ9P266 1359 aa27.22■■□□□ 1.95
CHKB-204ENST00000465842 NUTM2FA1L443 756 aa27.21■■□□□ 1.95
CHKB-204ENST00000465842 PHF23Q9BUL5 403 aaPredicted RBP27.2■■□□□ 1.94
CHKB-204ENST00000465842 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
CHKB-204ENST00000465842 ESCO1Q5FWF5 840 aa27.18■■□□□ 1.94
CHKB-204ENST00000465842 DDX17Q92841 729 aaKnown RBP27.17■■□□□ 1.94
CHKB-204ENST00000465842 NHSL1Q5SYE7 1610 aa27.16■■□□□ 1.94
CHKB-204ENST00000465842 KIAA1210Q9ULL0 1709 aa27.16■■□□□ 1.94
CHKB-204ENST00000465842 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
CHKB-204ENST00000465842 FMN2Q9NZ56 1722 aa27.13■■□□□ 1.93
CHKB-204ENST00000465842 MINK1Q8N4C8 1332 aaPredicted RBP27.13■■□□□ 1.93
CHKB-204ENST00000465842 NBPF1Q3BBV0 1214 aa27.12■■□□□ 1.93
CHKB-204ENST00000465842 HIRIP3Q9BW71 556 aaPredicted RBP27.12■■□□□ 1.93
CHKB-204ENST00000465842 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
CHKB-204ENST00000465842 LRRC59Q96AG4 307 aaKnown RBP27.11■■□□□ 1.93
CHKB-204ENST00000465842 ARHGEF28Q8N1W1 1705 aaKnown RBP27.1■■□□□ 1.93
CHKB-204ENST00000465842 SPATA31A6Q5VVP1 1343 aa27.08■■□□□ 1.93
CHKB-204ENST00000465842 NPHP3Q7Z494 1330 aa27.08■■□□□ 1.93
CHKB-204ENST00000465842 SHPRHQ149N8 1683 aa27.08■■□□□ 1.92
CHKB-204ENST00000465842 ADGRB2O60241 1585 aa27.07■■□□□ 1.92
CHKB-204ENST00000465842 FOXO3O43524 673 aa27.05■■□□□ 1.92
CHKB-204ENST00000465842 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
CHKB-204ENST00000465842 EIF3AQ14152 1382 aaKnown RBP27.04■■□□□ 1.92
CHKB-204ENST00000465842 NUTM2BA6NNL0 878 aaPredicted RBP27.03■■□□□ 1.92
CHKB-204ENST00000465842 NUTM2EB1AL46 878 aaPredicted RBP27.03■■□□□ 1.92
CHKB-204ENST00000465842 SOS2Q07890 1332 aaPredicted RBP27.03■■□□□ 1.92
CHKB-204ENST00000465842 KIF1AQ12756 1690 aa27.03■■□□□ 1.92
CHKB-204ENST00000465842 NUTM2AQ8IVF1 878 aaPredicted RBP27.03■■□□□ 1.92
CHKB-204ENST00000465842 TRPM1Q7Z4N2 1603 aa27.02■■□□□ 1.92
CHKB-204ENST00000465842 ROCK2O75116 1388 aaKnown RBP27.02■■□□□ 1.92
CHKB-204ENST00000465842 XPCQ01831 940 aaPredicted RBP27.02■■□□□ 1.92
CHKB-204ENST00000465842 ANKARQ7Z5J8 1434 aa27.01■■□□□ 1.91
CHKB-204ENST00000465842 WASLO00401 505 aaPredicted RBP27.01■■□□□ 1.91
CHKB-204ENST00000465842 ILDR2Q71H61 639 aa27.01■■□□□ 1.91
CHKB-204ENST00000465842 PHF8Q9UPP1 1060 aa27.01■■□□□ 1.91
CHKB-204ENST00000465842 PNPLA6Q8IY17 1366 aa27■■□□□ 1.91
CHKB-204ENST00000465842 LRP6O75581 1613 aa26.98■■□□□ 1.91
CHKB-204ENST00000465842 RGPD8O14715 1765 aaPredicted RBP26.98■■□□□ 1.91
CHKB-204ENST00000465842 CENPJQ9HC77 1338 aaPredicted RBP26.97■■□□□ 1.91
CHKB-204ENST00000465842 TULP4Q9NRJ4 1543 aa26.97■■□□□ 1.91
CHKB-204ENST00000465842 PXDNQ92626 1479 aa26.97■■□□□ 1.91
CHKB-204ENST00000465842 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
CHKB-204ENST00000465842 USP32Q8NFA0 1604 aa26.96■■□□□ 1.91
CHKB-204ENST00000465842 PMFBP1Q8TBY8 1022 aa26.95■■□□□ 1.9
CHKB-204ENST00000465842 KRT28Q7Z3Y7 464 aa26.94■■□□□ 1.9
CHKB-204ENST00000465842 CDK19Q9BWU1 502 aa26.93■■□□□ 1.9
CHKB-204ENST00000465842 PRR36Q9H6K5 1346 aa26.92■■□□□ 1.9
CHKB-204ENST00000465842 PSME1Q06323 249 aa26.92■■□□□ 1.9
CHKB-204ENST00000465842 QRICH2Q9H0J4 1663 aa26.9■■□□□ 1.9
CHKB-204ENST00000465842 RGS17Q9UGC6 210 aaPredicted RBP26.9■■□□□ 1.9
CHKB-204ENST00000465842 NUDT16Q96DE0 195 aaKnown RBP26.89■■□□□ 1.9
CHKB-204ENST00000465842 SRPK2P78362 688 aaKnown RBP26.88■■□□□ 1.89
CHKB-204ENST00000465842 CARD11Q9BXL7 1154 aa26.88■■□□□ 1.89
CHKB-204ENST00000465842 ADAMTS2O95450 1211 aa26.87■■□□□ 1.89
CHKB-204ENST00000465842 NGDNQ8NEJ9 315 aaKnown RBP26.87■■□□□ 1.89
CHKB-204ENST00000465842 ATP7BP35670 1465 aa26.87■■□□□ 1.89
CHKB-204ENST00000465842 RALGAPBQ86X10 1494 aa26.87■■□□□ 1.89
CHKB-204ENST00000465842 GPRASP1Q5JY77 1395 aa26.86■■□□□ 1.89
CHKB-204ENST00000465842 ITSN1Q15811 1721 aa26.86■■□□□ 1.89
CHKB-204ENST00000465842 LMOD2Q6P5Q4 547 aa26.86■■□□□ 1.89
CHKB-204ENST00000465842 SPATA31A3Q5VYP0 1347 aa26.86■■□□□ 1.89
CHKB-204ENST00000465842 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
CHKB-204ENST00000465842 C8orf37Q96NL8 207 aa26.85■■□□□ 1.89
CHKB-204ENST00000465842 COL22A1Q8NFW1 1626 aaPredicted RBP26.84■■□□□ 1.89
CHKB-204ENST00000465842 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
CHKB-204ENST00000465842 TNS3Q68CZ2 1445 aa26.83■■□□□ 1.89
CHKB-204ENST00000465842 SBNO1A3KN83 1393 aa26.83■■□□□ 1.88
CHKB-204ENST00000465842 ZNF772Q68DY9 489 aaPredicted RBP26.82■■□□□ 1.88
CHKB-204ENST00000465842 POTEAQ6S8J7 498 aa26.82■■□□□ 1.88
CHKB-204ENST00000465842 PLEKHG5O94827 1062 aa26.81■■□□□ 1.88
CHKB-204ENST00000465842 CABP2Q9NPB3 220 aa26.81■■□□□ 1.88
CHKB-204ENST00000465842 CCDC61Q9Y6R9 512 aa26.81■■□□□ 1.88
CHKB-204ENST00000465842 HAP1P54257 671 aaPredicted RBP26.8■■□□□ 1.88
CHKB-204ENST00000465842 AFF2P51816 1311 aa26.8■■□□□ 1.88
CHKB-204ENST00000465842 EVC2Q86UK5 1308 aa26.8■■□□□ 1.88
CHKB-204ENST00000465842 NGLY1Q96IV0 654 aa26.79■■□□□ 1.88
CHKB-204ENST00000465842 PAK3O75914 559 aaPredicted RBP26.78■■□□□ 1.88
CHKB-204ENST00000465842 ARHGEF10O15013 1369 aa26.78■■□□□ 1.88
CHKB-204ENST00000465842 TOPAZ1Q8N9V7 1692 aa26.76■■□□□ 1.87
CHKB-204ENST00000465842 PPIP5K1Q6PFW1 1433 aa26.75■■□□□ 1.87
CHKB-204ENST00000465842 SOCS7O14512 581 aa26.75■■□□□ 1.87
CHKB-204ENST00000465842 ACEP12821 1306 aa26.74■■□□□ 1.87
CHKB-204ENST00000465842 TIMELESSQ9UNS1 1208 aa26.74■■□□□ 1.87
CHKB-204ENST00000465842 TRPM3Q9HCF6 1732 aaPredicted RBP26.73■■□□□ 1.87
CHKB-204ENST00000465842 PLEKHG3A1L390 1219 aa26.72■■□□□ 1.87
CHKB-204ENST00000465842 CABLES1Q8TDN4 633 aa26.71■■□□□ 1.87
CHKB-204ENST00000465842 POLR3AO14802 1390 aaPredicted RBP26.71■■□□□ 1.87
CHKB-204ENST00000465842 CABP1Q9NZU7 370 aa26.68■■□□□ 1.86
CHKB-204ENST00000465842 USP21Q9UK80 565 aa26.68■■□□□ 1.86
CHKB-204ENST00000465842 SBNO2Q9Y2G9 1366 aa26.68■■□□□ 1.86
CHKB-204ENST00000465842 MARF1Q9Y4F3 1742 aaKnown RBP26.67■■□□□ 1.86
CHKB-204ENST00000465842 ALS2Q96Q42 1657 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms