RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 ABCC11Q96J66 1382 aa29.61■■■□□ 2.33
COL2A1-203ENST00000465743 C14orf93Q9H972 538 aaKnown RBP29.59■■■□□ 2.33
COL2A1-203ENST00000465743 ORAI2Q96SN7 254 aa29.58■■■□□ 2.33
COL2A1-203ENST00000465743 FMN2Q9NZ56 1722 aa29.57■■■□□ 2.32
COL2A1-203ENST00000465743 ADGRB1O14514 1584 aa29.56■■■□□ 2.32
COL2A1-203ENST00000465743 KDM2AQ9Y2K7 1162 aa29.54■■■□□ 2.32
COL2A1-203ENST00000465743 DHX57Q6P158 1386 aaKnown RBP29.53■■■□□ 2.32
COL2A1-203ENST00000465743 SPATA31A6Q5VVP1 1343 aa29.53■■■□□ 2.32
COL2A1-203ENST00000465743 POTEAQ6S8J7 498 aa29.52■■■□□ 2.32
COL2A1-203ENST00000465743 DCAF11Q8TEB1 546 aa29.52■■■□□ 2.32
COL2A1-203ENST00000465743 NUTM2FA1L443 756 aa29.51■■■□□ 2.31
COL2A1-203ENST00000465743 PNPLA6Q8IY17 1366 aa29.49■■■□□ 2.31
COL2A1-203ENST00000465743 NUTM2BA6NNL0 878 aaPredicted RBP29.48■■■□□ 2.31
COL2A1-203ENST00000465743 NUTM2EB1AL46 878 aaPredicted RBP29.48■■■□□ 2.31
COL2A1-203ENST00000465743 NUTM2AQ8IVF1 878 aaPredicted RBP29.48■■■□□ 2.31
COL2A1-203ENST00000465743 RGPD8O14715 1765 aaPredicted RBP29.48■■■□□ 2.31
COL2A1-203ENST00000465743 DLC1Q96QB1 1528 aa29.47■■■□□ 2.31
COL2A1-203ENST00000465743 SAFB2Q14151 953 aaKnown RBP eCLIP29.47■■■□□ 2.31
COL2A1-203ENST00000465743 MEX3CQ5U5Q3 659 aaKnown RBP29.46■■■□□ 2.31
COL2A1-203ENST00000465743 PRAM1Q96QH2 718 aa29.45■■■□□ 2.31
COL2A1-203ENST00000465743 ESCO1Q5FWF5 840 aa29.44■■■□□ 2.3
COL2A1-203ENST00000465743 LRRC59Q96AG4 307 aaKnown RBP29.44■■■□□ 2.3
COL2A1-203ENST00000465743 PXDNQ92626 1479 aa29.43■■■□□ 2.3
COL2A1-203ENST00000465743 SOS2Q07890 1332 aaPredicted RBP29.43■■■□□ 2.3
COL2A1-203ENST00000465743 TRIM26Q12899 539 aaPredicted RBP29.42■■■□□ 2.3
COL2A1-203ENST00000465743 ARHGEF28Q8N1W1 1705 aaKnown RBP29.41■■■□□ 2.3
COL2A1-203ENST00000465743 KIF1AQ12756 1690 aa29.4■■■□□ 2.3
COL2A1-203ENST00000465743 XPCQ01831 940 aaPredicted RBP29.4■■■□□ 2.3
COL2A1-203ENST00000465743 ADGRB2O60241 1585 aa29.39■■■□□ 2.3
COL2A1-203ENST00000465743 USP32Q8NFA0 1604 aa29.39■■■□□ 2.3
COL2A1-203ENST00000465743 SIRT1Q96EB6 747 aa29.39■■■□□ 2.3
COL2A1-203ENST00000465743 TRAK1Q9UPV9 953 aa29.39■■■□□ 2.3
COL2A1-203ENST00000465743 COL22A1Q8NFW1 1626 aaPredicted RBP29.38■■■□□ 2.29
COL2A1-203ENST00000465743 FOXO3O43524 673 aa29.35■■■□□ 2.29
COL2A1-203ENST00000465743 POGKQ9P215 609 aa29.35■■■□□ 2.29
COL2A1-203ENST00000465743 NPHP3Q7Z494 1330 aa29.35■■■□□ 2.29
COL2A1-203ENST00000465743 HIRIP3Q9BW71 556 aaPredicted RBP29.33■■■□□ 2.29
COL2A1-203ENST00000465743 KIAA1210Q9ULL0 1709 aa29.33■■■□□ 2.29
COL2A1-203ENST00000465743 AFF2P51816 1311 aa29.3■■■□□ 2.28
COL2A1-203ENST00000465743 C8orf37Q96NL8 207 aa29.3■■■□□ 2.28
COL2A1-203ENST00000465743 MINK1Q8N4C8 1332 aaPredicted RBP29.29■■■□□ 2.28
COL2A1-203ENST00000465743 ADAMTS2O95450 1211 aa29.29■■■□□ 2.28
COL2A1-203ENST00000465743 STAC3Q96MF2 364 aa29.28■■■□□ 2.28
COL2A1-203ENST00000465743 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
COL2A1-203ENST00000465743 SIN3AQ96ST3 1273 aa29.25■■■□□ 2.27
COL2A1-203ENST00000465743 MARF1Q9Y4F3 1742 aaKnown RBP29.25■■■□□ 2.27
COL2A1-203ENST00000465743 ANKARQ7Z5J8 1434 aa29.24■■■□□ 2.27
COL2A1-203ENST00000465743 TULP4Q9NRJ4 1543 aa29.24■■■□□ 2.27
COL2A1-203ENST00000465743 PHF8Q9UPP1 1060 aa29.23■■■□□ 2.27
COL2A1-203ENST00000465743 PRR36Q9H6K5 1346 aa29.21■■■□□ 2.27
COL2A1-203ENST00000465743 NBPF1Q3BBV0 1214 aa29.21■■■□□ 2.27
COL2A1-203ENST00000465743 KRT28Q7Z3Y7 464 aa29.19■■■□□ 2.26
COL2A1-203ENST00000465743 PMFBP1Q8TBY8 1022 aa29.19■■■□□ 2.26
COL2A1-203ENST00000465743 ABCA3Q99758 1704 aa29.19■■■□□ 2.26
COL2A1-203ENST00000465743 TRPM3Q9HCF6 1732 aaPredicted RBP29.18■■■□□ 2.26
COL2A1-203ENST00000465743 L3MBTL2Q969R5 705 aa29.18■■■□□ 2.26
COL2A1-203ENST00000465743 TNS3Q68CZ2 1445 aa29.18■■■□□ 2.26
COL2A1-203ENST00000465743 SPATA31A3Q5VYP0 1347 aa29.18■■■□□ 2.26
COL2A1-203ENST00000465743 NGLY1Q96IV0 654 aa29.16■■■□□ 2.26
COL2A1-203ENST00000465743 ATP7BP35670 1465 aa29.16■■■□□ 2.26
COL2A1-203ENST00000465743 TRPM1Q7Z4N2 1603 aa29.16■■■□□ 2.26
COL2A1-203ENST00000465743 ITSN1Q15811 1721 aa29.15■■■□□ 2.26
COL2A1-203ENST00000465743 WASLO00401 505 aaPredicted RBP29.15■■■□□ 2.26
COL2A1-203ENST00000465743 NEUROD1Q13562 356 aa29.15■■■□□ 2.26
COL2A1-203ENST00000465743 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
COL2A1-203ENST00000465743 PLEKHG5O94827 1062 aa29.12■■■□□ 2.25
COL2A1-203ENST00000465743 RXRBP28702 533 aa29.12■■■□□ 2.25
COL2A1-203ENST00000465743 TOPAZ1Q8N9V7 1692 aa29.12■■■□□ 2.25
COL2A1-203ENST00000465743 QRICH2Q9H0J4 1663 aa29.12■■■□□ 2.25
COL2A1-203ENST00000465743 RGS12O14924 1447 aa29.11■■■□□ 2.25
COL2A1-203ENST00000465743 ALS2Q96Q42 1657 aa29.1■■■□□ 2.25
COL2A1-203ENST00000465743 QTRT2Q9H974 415 aaKnown RBP29.09■■■□□ 2.25
COL2A1-203ENST00000465743 SBNO1A3KN83 1393 aa29.09■■■□□ 2.25
COL2A1-203ENST00000465743 PSME1Q06323 249 aa29.08■■■□□ 2.25
COL2A1-203ENST00000465743 CDK12Q9NYV4 1490 aaPredicted RBP29.08■■■□□ 2.25
COL2A1-203ENST00000465743 CABLES1Q8TDN4 633 aa29.07■■■□□ 2.24
COL2A1-203ENST00000465743 USP21Q9UK80 565 aa29.07■■■□□ 2.24
COL2A1-203ENST00000465743 LMOD2Q6P5Q4 547 aa29.06■■■□□ 2.24
COL2A1-203ENST00000465743 BCL9LQ86UU0 1499 aa29.04■■■□□ 2.24
COL2A1-203ENST00000465743 FNBP4Q8N3X1 1017 aaPredicted RBP29.04■■■□□ 2.24
COL2A1-203ENST00000465743 PLCH1Q4KWH8 1693 aa29.04■■■□□ 2.24
COL2A1-203ENST00000465743 ATRNO75882 1429 aa29.03■■■□□ 2.24
COL2A1-203ENST00000465743 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.03■■■□□ 2.24
COL2A1-203ENST00000465743 NUDT16Q96DE0 195 aaKnown RBP29.03■■■□□ 2.24
COL2A1-203ENST00000465743 CDK19Q9BWU1 502 aa29.03■■■□□ 2.24
COL2A1-203ENST00000465743 CRYBG1Q9Y4K1 1723 aa29.03■■■□□ 2.24
COL2A1-203ENST00000465743 ARHGEF10O15013 1369 aa29.01■■■□□ 2.24
COL2A1-203ENST00000465743 RBM6P78332 1123 aaKnown RBP29.01■■■□□ 2.23
COL2A1-203ENST00000465743 CENPJQ9HC77 1338 aaPredicted RBP29■■■□□ 2.23
COL2A1-203ENST00000465743 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
COL2A1-203ENST00000465743 GPRASP1Q5JY77 1395 aa29■■■□□ 2.23
COL2A1-203ENST00000465743 NGDNQ8NEJ9 315 aaKnown RBP28.99■■■□□ 2.23
COL2A1-203ENST00000465743 SLIT2O94813 1529 aa28.99■■■□□ 2.23
COL2A1-203ENST00000465743 HAP1P54257 671 aaPredicted RBP28.98■■■□□ 2.23
COL2A1-203ENST00000465743 TRPC5Q9UL62 973 aaPredicted RBP28.97■■■□□ 2.23
COL2A1-203ENST00000465743 ROCK2O75116 1388 aaKnown RBP28.97■■■□□ 2.23
COL2A1-203ENST00000465743 NBPF8Q3BBV2 869 aa28.96■■■□□ 2.23
COL2A1-203ENST00000465743 GLI3P10071 1580 aa28.93■■■□□ 2.22
COL2A1-203ENST00000465743 NWD2Q9ULI1 1742 aa28.93■■■□□ 2.22
COL2A1-203ENST00000465743 PHRF1Q9P1Y6 1649 aaKnown RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms