RNA–Protein interactions for RNA: ENST00000465724.1

C4A-247, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 964 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-247ENST00000465724 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
C4A-247ENST00000465724 NBPF1Q3BBV0 1214 aa24.78■■□□□ 1.56
C4A-247ENST00000465724 KIAA1210Q9ULL0 1709 aa24.78■■□□□ 1.56
C4A-247ENST00000465724 DLC1Q96QB1 1528 aa24.76■■□□□ 1.55
C4A-247ENST00000465724 ROBO1Q9Y6N7 1651 aa24.75■■□□□ 1.55
C4A-247ENST00000465724 MST1RQ04912 1400 aa24.73■■□□□ 1.55
C4A-247ENST00000465724 ROCK2O75116 1388 aaKnown RBP24.7■■□□□ 1.55
C4A-247ENST00000465724 NBPF8Q3BBV2 869 aa24.7■■□□□ 1.54
C4A-247ENST00000465724 BRINP3Q76B58 766 aa24.7■■□□□ 1.54
C4A-247ENST00000465724 CDC42BPGQ6DT37 1551 aa24.68■■□□□ 1.54
C4A-247ENST00000465724 NUTM2FA1L443 756 aa24.68■■□□□ 1.54
C4A-247ENST00000465724 C1orf167Q5SNV9 1468 aa24.68■■□□□ 1.54
C4A-247ENST00000465724 MINK1Q8N4C8 1332 aaPredicted RBP24.67■■□□□ 1.54
C4A-247ENST00000465724 TRPM1Q7Z4N2 1603 aa24.67■■□□□ 1.54
C4A-247ENST00000465724 TIMELESSQ9UNS1 1208 aa24.66■■□□□ 1.54
C4A-247ENST00000465724 ESCO1Q5FWF5 840 aa24.65■■□□□ 1.54
C4A-247ENST00000465724 HIRIP3Q9BW71 556 aaPredicted RBP24.65■■□□□ 1.54
C4A-247ENST00000465724 ORAI2Q96SN7 254 aa24.64■■□□□ 1.54
C4A-247ENST00000465724 ARHGEF28Q8N1W1 1705 aaKnown RBP24.63■■□□□ 1.53
C4A-247ENST00000465724 CARD11Q9BXL7 1154 aa24.61■■□□□ 1.53
C4A-247ENST00000465724 PHLPP1O60346 1717 aa24.61■■□□□ 1.53
C4A-247ENST00000465724 CENPJQ9HC77 1338 aaPredicted RBP24.61■■□□□ 1.53
C4A-247ENST00000465724 WASLO00401 505 aaPredicted RBP24.59■■□□□ 1.53
C4A-247ENST00000465724 FMN2Q9NZ56 1722 aa24.58■■□□□ 1.52
C4A-247ENST00000465724 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
C4A-247ENST00000465724 EIF3AQ14152 1382 aaKnown RBP24.57■■□□□ 1.52
C4A-247ENST00000465724 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
C4A-247ENST00000465724 ADGRB2O60241 1585 aa24.57■■□□□ 1.52
C4A-247ENST00000465724 RALGAPBQ86X10 1494 aa24.57■■□□□ 1.52
C4A-247ENST00000465724 GPRASP1Q5JY77 1395 aa24.56■■□□□ 1.52
C4A-247ENST00000465724 CDK19Q9BWU1 502 aa24.53■■□□□ 1.52
C4A-247ENST00000465724 NPHP3Q7Z494 1330 aa24.53■■□□□ 1.52
C4A-247ENST00000465724 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
C4A-247ENST00000465724 FOXO3O43524 673 aa24.52■■□□□ 1.52
C4A-247ENST00000465724 LRRC59Q96AG4 307 aaKnown RBP24.52■■□□□ 1.52
C4A-247ENST00000465724 PHF8Q9UPP1 1060 aa24.52■■□□□ 1.52
C4A-247ENST00000465724 JCADQ9P266 1359 aa24.52■■□□□ 1.52
C4A-247ENST00000465724 COL16A1Q07092 1604 aaPredicted RBP24.51■■□□□ 1.51
C4A-247ENST00000465724 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
C4A-247ENST00000465724 TULP4Q9NRJ4 1543 aa24.49■■□□□ 1.51
C4A-247ENST00000465724 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
C4A-247ENST00000465724 PMFBP1Q8TBY8 1022 aa24.48■■□□□ 1.51
C4A-247ENST00000465724 NUDT16Q96DE0 195 aaKnown RBP24.48■■□□□ 1.51
C4A-247ENST00000465724 QRICH2Q9H0J4 1663 aa24.47■■□□□ 1.51
C4A-247ENST00000465724 SOS2Q07890 1332 aaPredicted RBP24.47■■□□□ 1.51
C4A-247ENST00000465724 PRR36Q9H6K5 1346 aa24.46■■□□□ 1.51
C4A-247ENST00000465724 XPCQ01831 940 aaPredicted RBP24.46■■□□□ 1.51
C4A-247ENST00000465724 RGPD8O14715 1765 aaPredicted RBP24.46■■□□□ 1.51
C4A-247ENST00000465724 KIF1AQ12756 1690 aa24.46■■□□□ 1.51
C4A-247ENST00000465724 EVC2Q86UK5 1308 aa24.45■■□□□ 1.5
C4A-247ENST00000465724 PSME1Q06323 249 aa24.45■■□□□ 1.5
C4A-247ENST00000465724 USP32Q8NFA0 1604 aa24.43■■□□□ 1.5
C4A-247ENST00000465724 KRT28Q7Z3Y7 464 aa24.43■■□□□ 1.5
C4A-247ENST00000465724 NGDNQ8NEJ9 315 aaKnown RBP24.43■■□□□ 1.5
C4A-247ENST00000465724 CABP2Q9NPB3 220 aa24.43■■□□□ 1.5
C4A-247ENST00000465724 CCDC61Q9Y6R9 512 aa24.42■■□□□ 1.5
C4A-247ENST00000465724 DISP3Q9P2K9 1392 aa24.42■■□□□ 1.5
C4A-247ENST00000465724 SPATA31A6Q5VVP1 1343 aa24.41■■□□□ 1.5
C4A-247ENST00000465724 ATP7BP35670 1465 aa24.39■■□□□ 1.5
C4A-247ENST00000465724 MED1Q15648 1581 aaPredicted RBP24.39■■□□□ 1.5
C4A-247ENST00000465724 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
C4A-247ENST00000465724 PXDNQ92626 1479 aa24.38■■□□□ 1.49
C4A-247ENST00000465724 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
C4A-247ENST00000465724 NUTM2BA6NNL0 878 aaPredicted RBP24.38■■□□□ 1.49
C4A-247ENST00000465724 NUTM2EB1AL46 878 aaPredicted RBP24.38■■□□□ 1.49
C4A-247ENST00000465724 NUTM2AQ8IVF1 878 aaPredicted RBP24.38■■□□□ 1.49
C4A-247ENST00000465724 ST20-MTHFSA0A0A6YYL1 179 aa24.37■■□□□ 1.49
C4A-247ENST00000465724 PNPLA6Q8IY17 1366 aa24.37■■□□□ 1.49
C4A-247ENST00000465724 ITSN1Q15811 1721 aa24.36■■□□□ 1.49
C4A-247ENST00000465724 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
C4A-247ENST00000465724 MEX3CQ5U5Q3 659 aaKnown RBP24.36■■□□□ 1.49
C4A-247ENST00000465724 SBNO2Q9Y2G9 1366 aa24.36■■□□□ 1.49
C4A-247ENST00000465724 USP47Q96K76 1375 aa24.35■■□□□ 1.49
C4A-247ENST00000465724 LMOD2Q6P5Q4 547 aa24.34■■□□□ 1.49
C4A-247ENST00000465724 SPATA31A3Q5VYP0 1347 aa24.34■■□□□ 1.49
C4A-247ENST00000465724 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
C4A-247ENST00000465724 PPIP5K1Q6PFW1 1433 aa24.33■■□□□ 1.49
C4A-247ENST00000465724 ACEP12821 1306 aa24.33■■□□□ 1.48
C4A-247ENST00000465724 SBNO1A3KN83 1393 aa24.31■■□□□ 1.48
C4A-247ENST00000465724 PAK3O75914 559 aaPredicted RBP24.31■■□□□ 1.48
C4A-247ENST00000465724 CABP1Q9NZU7 370 aa24.31■■□□□ 1.48
C4A-247ENST00000465724 ATAD2Q6PL18 1390 aa24.29■■□□□ 1.48
C4A-247ENST00000465724 TNS3Q68CZ2 1445 aa24.29■■□□□ 1.48
C4A-247ENST00000465724 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
C4A-247ENST00000465724 TESK2Q96S53 571 aa24.28■■□□□ 1.48
C4A-247ENST00000465724 POLR3AO14802 1390 aaPredicted RBP24.28■■□□□ 1.48
C4A-247ENST00000465724 LRP6O75581 1613 aa24.27■■□□□ 1.48
C4A-247ENST00000465724 ARHGEF10O15013 1369 aa24.27■■□□□ 1.48
C4A-247ENST00000465724 HAP1P54257 671 aaPredicted RBP24.26■■□□□ 1.47
C4A-247ENST00000465724 TMF1P82094 1093 aa24.26■■□□□ 1.47
C4A-247ENST00000465724 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
C4A-247ENST00000465724 ADAMTS2O95450 1211 aa24.25■■□□□ 1.47
C4A-247ENST00000465724 TMC1Q8TDI8 760 aa24.24■■□□□ 1.47
C4A-247ENST00000465724 PUS7Q96PZ0 661 aaKnown RBP24.24■■□□□ 1.47
C4A-247ENST00000465724 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.47
C4A-247ENST00000465724 COL22A1Q8NFW1 1626 aaPredicted RBP24.23■■□□□ 1.47
C4A-247ENST00000465724 C8orf37Q96NL8 207 aa24.22■■□□□ 1.47
C4A-247ENST00000465724 ZNF692Q9BU19 519 aaPredicted RBP24.22■■□□□ 1.47
C4A-247ENST00000465724 CDCA8Q53HL2 280 aa24.2■■□□□ 1.46
C4A-247ENST00000465724 TRPM3Q9HCF6 1732 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms