RNA–Protein interactions for RNA: ENST00000463820.5

NELFA-212, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-212ENST00000463820 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
NELFA-212ENST00000463820 PLEKHH1Q9ULM0 1364 aa22.16■■□□□ 1.14
NELFA-212ENST00000463820 SETBP1Q9Y6X0 1596 aa22.15■■□□□ 1.14
NELFA-212ENST00000463820 SPATA31D1Q6ZQQ2 1576 aa22.14■■□□□ 1.14
NELFA-212ENST00000463820 CENPJQ9HC77 1338 aaPredicted RBP22.13■■□□□ 1.13
NELFA-212ENST00000463820 PPP2R1AP30153 589 aa22.13■■□□□ 1.13
NELFA-212ENST00000463820 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
NELFA-212ENST00000463820 KNSTRNQ9Y448 316 aa22.13■■□□□ 1.13
NELFA-212ENST00000463820 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
NELFA-212ENST00000463820 STK26Q9P289 416 aa22.12■■□□□ 1.13
NELFA-212ENST00000463820 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
NELFA-212ENST00000463820 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
NELFA-212ENST00000463820 SAFB2Q14151 953 aaKnown RBP eCLIP22.1■■□□□ 1.13
NELFA-212ENST00000463820 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
NELFA-212ENST00000463820 CDCA8Q53HL2 280 aa22.1■■□□□ 1.13
NELFA-212ENST00000463820 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
NELFA-212ENST00000463820 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
NELFA-212ENST00000463820 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
NELFA-212ENST00000463820 AMER1Q5JTC6 1135 aaPredicted RBP22.09■■□□□ 1.13
NELFA-212ENST00000463820 NEFMP07197 916 aa22.09■■□□□ 1.13
NELFA-212ENST00000463820 KDM2BQ8NHM5 1336 aa22.09■■□□□ 1.13
NELFA-212ENST00000463820 CENPQQ7L2Z9 268 aaPredicted RBP22.07■■□□□ 1.12
NELFA-212ENST00000463820 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
NELFA-212ENST00000463820 MYO3AQ8NEV4 1616 aa22.07■■□□□ 1.12
NELFA-212ENST00000463820 ZNF521Q96K83 1311 aa22.06■■□□□ 1.12
NELFA-212ENST00000463820 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
NELFA-212ENST00000463820 MYOM1P52179 1685 aa22.06■■□□□ 1.12
NELFA-212ENST00000463820 GOLGA2Q08379 1002 aa22.05■■□□□ 1.12
NELFA-212ENST00000463820 KDM5AP29375 1690 aaKnown RBP22.04■■□□□ 1.12
NELFA-212ENST00000463820 QRICH2Q9H0J4 1663 aa22.04■■□□□ 1.12
NELFA-212ENST00000463820 SBNO2Q9Y2G9 1366 aa22.04■■□□□ 1.12
NELFA-212ENST00000463820 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
NELFA-212ENST00000463820 RIMS2Q9UQ26 1411 aa22.03■■□□□ 1.12
NELFA-212ENST00000463820 TNRQ92752 1358 aa22.02■■□□□ 1.12
NELFA-212ENST00000463820 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
NELFA-212ENST00000463820 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
NELFA-212ENST00000463820 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
NELFA-212ENST00000463820 NPC1L1Q9UHC9 1359 aa22■■□□□ 1.11
NELFA-212ENST00000463820 SPINK5Q9NQ38 1064 aaPredicted RBP22■■□□□ 1.11
NELFA-212ENST00000463820 ALKQ9UM73 1620 aa21.99■■□□□ 1.11
NELFA-212ENST00000463820 CARD14Q9BXL6 1004 aa21.99■■□□□ 1.11
NELFA-212ENST00000463820 SLC24A1O60721 1099 aa21.98■■□□□ 1.11
NELFA-212ENST00000463820 SLFN5Q08AF3 891 aa21.98■■□□□ 1.11
NELFA-212ENST00000463820 SLC12A5Q9H2X9 1139 aa21.98■■□□□ 1.11
NELFA-212ENST00000463820 PRAM1Q96QH2 718 aa21.97■■□□□ 1.11
NELFA-212ENST00000463820 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
NELFA-212ENST00000463820 FAM161AQ3B820 660 aa21.96■■□□□ 1.11
NELFA-212ENST00000463820 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
NELFA-212ENST00000463820 PTPRMP28827 1452 aa21.96■■□□□ 1.11
NELFA-212ENST00000463820 C8orf34Q49A92 452 aa21.96■■□□□ 1.11
NELFA-212ENST00000463820 TRMT2AQ8IZ69 625 aaKnown RBP21.96■■□□□ 1.11
NELFA-212ENST00000463820 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
NELFA-212ENST00000463820 TULP4Q9NRJ4 1543 aa21.94■■□□□ 1.1
NELFA-212ENST00000463820 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
NELFA-212ENST00000463820 APAF1O14727 1248 aa21.93■■□□□ 1.1
NELFA-212ENST00000463820 DAXXQ9UER7 740 aaPredicted RBP21.93■■□□□ 1.1
NELFA-212ENST00000463820 DMRT2Q9Y5R5 561 aa21.92■■□□□ 1.1
NELFA-212ENST00000463820 BCAR3O75815 825 aa21.92■■□□□ 1.1
NELFA-212ENST00000463820 POGKQ9P215 609 aa21.92■■□□□ 1.1
NELFA-212ENST00000463820 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
NELFA-212ENST00000463820 RGS3P49796 1198 aa21.91■■□□□ 1.1
NELFA-212ENST00000463820 WAPLQ7Z5K2 1190 aa21.91■■□□□ 1.1
NELFA-212ENST00000463820 NGEFQ8N5V2 710 aa21.9■■□□□ 1.1
NELFA-212ENST00000463820 METP08581 1390 aa21.9■■□□□ 1.1
NELFA-212ENST00000463820 NKTRP30414 1462 aaKnown RBP21.89■■□□□ 1.09
NELFA-212ENST00000463820 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.09
NELFA-212ENST00000463820 C3P01024 1663 aa21.89■■□□□ 1.09
NELFA-212ENST00000463820 TMEM2Q9UHN6 1383 aa21.89■■□□□ 1.09
NELFA-212ENST00000463820 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.09
NELFA-212ENST00000463820 FER1L4A9Z1Z3 1794 aa21.88■■□□□ 1.09
NELFA-212ENST00000463820 LTKP29376 864 aa21.88■■□□□ 1.09
NELFA-212ENST00000463820 SRPK2P78362 688 aaKnown RBP21.88■■□□□ 1.09
NELFA-212ENST00000463820 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.88■■□□□ 1.09
NELFA-212ENST00000463820 E9PSI1 815 aa21.87■■□□□ 1.09
NELFA-212ENST00000463820 NFKBIBQ15653 356 aa21.87■■□□□ 1.09
NELFA-212ENST00000463820 SETD1AO15047 1707 aaKnown RBP21.87■■□□□ 1.09
NELFA-212ENST00000463820 NSD3Q9BZ95 1437 aa21.86■■□□□ 1.09
NELFA-212ENST00000463820 RTN4Q9NQC3 1192 aaKnown RBP21.84■■□□□ 1.09
NELFA-212ENST00000463820 TXNDC2Q86VQ3 553 aa21.83■■□□□ 1.09
NELFA-212ENST00000463820 IGHDP01880 384 aa21.83■■□□□ 1.08
NELFA-212ENST00000463820 GSE1Q14687 1217 aa21.82■■□□□ 1.08
NELFA-212ENST00000463820 NLRP1Q9C000 1473 aa21.81■■□□□ 1.08
NELFA-212ENST00000463820 TNNT2P45379 298 aaPredicted RBP21.81■■□□□ 1.08
NELFA-212ENST00000463820 HDGFP51858 240 aaKnown RBP21.81■■□□□ 1.08
NELFA-212ENST00000463820 CDK19Q9BWU1 502 aa21.81■■□□□ 1.08
NELFA-212ENST00000463820 PDE3AQ14432 1141 aa21.8■■□□□ 1.08
NELFA-212ENST00000463820 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
NELFA-212ENST00000463820 CGNL1Q0VF96 1302 aa21.79■■□□□ 1.08
NELFA-212ENST00000463820 SLC26A8Q96RN1 970 aa21.79■■□□□ 1.08
NELFA-212ENST00000463820 NINLQ9Y2I6 1382 aa21.78■■□□□ 1.08
NELFA-212ENST00000463820 PUS7Q96PZ0 661 aaKnown RBP21.78■■□□□ 1.08
NELFA-212ENST00000463820 ADAMTS13Q76LX8 1427 aa21.76■■□□□ 1.07
NELFA-212ENST00000463820 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
NELFA-212ENST00000463820 A0A1W2PP64 1363 aa21.76■■□□□ 1.07
NELFA-212ENST00000463820 PANK1Q8TE04 598 aa21.75■■□□□ 1.07
NELFA-212ENST00000463820 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
NELFA-212ENST00000463820 DLC1Q96QB1 1528 aa21.74■■□□□ 1.07
NELFA-212ENST00000463820 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
NELFA-212ENST00000463820 FRAT1Q92837 279 aaPredicted RBP21.73■■□□□ 1.07
NELFA-212ENST00000463820 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms