RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 NUTM2FA1L443 756 aa12.56□□□□□ -0.4
TMEM254-208ENST00000463209 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM254-208ENST00000463209 C1orf167Q5SNV9 1468 aa12.56□□□□□ -0.4
TMEM254-208ENST00000463209 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
TMEM254-208ENST00000463209 ILDR2Q71H61 639 aa12.55□□□□□ -0.4
TMEM254-208ENST00000463209 ABCC11Q96J66 1382 aa12.55□□□□□ -0.4
TMEM254-208ENST00000463209 FMN2Q9NZ56 1722 aa12.54□□□□□ -0.4
TMEM254-208ENST00000463209 ORAI2Q96SN7 254 aa12.54□□□□□ -0.4
TMEM254-208ENST00000463209 PRAM1Q96QH2 718 aa12.53□□□□□ -0.4
TMEM254-208ENST00000463209 TRAK1Q9UPV9 953 aa12.53□□□□□ -0.4
TMEM254-208ENST00000463209 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
TMEM254-208ENST00000463209 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-208ENST00000463209 LRP6O75581 1613 aa12.51□□□□□ -0.41
TMEM254-208ENST00000463209 SHPRHQ149N8 1683 aa12.51□□□□□ -0.41
TMEM254-208ENST00000463209 DLC1Q96QB1 1528 aa12.51□□□□□ -0.41
TMEM254-208ENST00000463209 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
TMEM254-208ENST00000463209 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-208ENST00000463209 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
TMEM254-208ENST00000463209 KIAA1210Q9ULL0 1709 aa12.49□□□□□ -0.41
TMEM254-208ENST00000463209 JCADQ9P266 1359 aa12.49□□□□□ -0.41
TMEM254-208ENST00000463209 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-208ENST00000463209 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-208ENST00000463209 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
TMEM254-208ENST00000463209 POGKQ9P215 609 aa12.49□□□□□ -0.41
TMEM254-208ENST00000463209 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
TMEM254-208ENST00000463209 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
TMEM254-208ENST00000463209 ADGRB2O60241 1585 aa12.47□□□□□ -0.41
TMEM254-208ENST00000463209 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-208ENST00000463209 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-208ENST00000463209 ADRA2BP18089 450 aa12.47□□□□□ -0.41
TMEM254-208ENST00000463209 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-208ENST00000463209 PXDNQ92626 1479 aa12.46□□□□□ -0.42
TMEM254-208ENST00000463209 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
TMEM254-208ENST00000463209 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
TMEM254-208ENST00000463209 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
TMEM254-208ENST00000463209 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
TMEM254-208ENST00000463209 FOXO3O43524 673 aa12.44□□□□□ -0.42
TMEM254-208ENST00000463209 SIRT1Q96EB6 747 aa12.44□□□□□ -0.42
TMEM254-208ENST00000463209 QRICH2Q9H0J4 1663 aa12.44□□□□□ -0.42
TMEM254-208ENST00000463209 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
TMEM254-208ENST00000463209 NBPF8Q3BBV2 869 aa12.42□□□□□ -0.42
TMEM254-208ENST00000463209 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
TMEM254-208ENST00000463209 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
TMEM254-208ENST00000463209 TULP4Q9NRJ4 1543 aa12.42□□□□□ -0.42
TMEM254-208ENST00000463209 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
TMEM254-208ENST00000463209 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
TMEM254-208ENST00000463209 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
TMEM254-208ENST00000463209 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
TMEM254-208ENST00000463209 TONSLQ96HA7 1378 aa12.41□□□□□ -0.42
TMEM254-208ENST00000463209 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
TMEM254-208ENST00000463209 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
TMEM254-208ENST00000463209 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
TMEM254-208ENST00000463209 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
TMEM254-208ENST00000463209 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
TMEM254-208ENST00000463209 PHF8Q9UPP1 1060 aa12.39□□□□□ -0.43
TMEM254-208ENST00000463209 ROCK2O75116 1388 aaKnown RBP12.39□□□□□ -0.43
TMEM254-208ENST00000463209 ATP7BP35670 1465 aa12.39□□□□□ -0.43
TMEM254-208ENST00000463209 TOPAZ1Q8N9V7 1692 aa12.38□□□□□ -0.43
TMEM254-208ENST00000463209 ANKARQ7Z5J8 1434 aa12.38□□□□□ -0.43
TMEM254-208ENST00000463209 ITSN1Q15811 1721 aa12.38□□□□□ -0.43
TMEM254-208ENST00000463209 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
TMEM254-208ENST00000463209 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
TMEM254-208ENST00000463209 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
TMEM254-208ENST00000463209 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
TMEM254-208ENST00000463209 KRT28Q7Z3Y7 464 aa12.36□□□□□ -0.43
TMEM254-208ENST00000463209 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
TMEM254-208ENST00000463209 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
TMEM254-208ENST00000463209 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
TMEM254-208ENST00000463209 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
TMEM254-208ENST00000463209 AFF2P51816 1311 aa12.35□□□□□ -0.43
TMEM254-208ENST00000463209 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
TMEM254-208ENST00000463209 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
TMEM254-208ENST00000463209 CABLES1Q8TDN4 633 aa12.34□□□□□ -0.43
TMEM254-208ENST00000463209 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
TMEM254-208ENST00000463209 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
TMEM254-208ENST00000463209 EIF3AQ14152 1382 aaKnown RBP12.33□□□□□ -0.44
TMEM254-208ENST00000463209 ALS2Q96Q42 1657 aa12.33□□□□□ -0.44
TMEM254-208ENST00000463209 PSME1Q06323 249 aa12.33□□□□□ -0.44
TMEM254-208ENST00000463209 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
TMEM254-208ENST00000463209 SOCS7O14512 581 aa12.32□□□□□ -0.44
TMEM254-208ENST00000463209 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
TMEM254-208ENST00000463209 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
TMEM254-208ENST00000463209 CARD11Q9BXL7 1154 aa12.31□□□□□ -0.44
TMEM254-208ENST00000463209 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
TMEM254-208ENST00000463209 GPRASP1Q5JY77 1395 aa12.3□□□□□ -0.44
TMEM254-208ENST00000463209 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
TMEM254-208ENST00000463209 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
TMEM254-208ENST00000463209 NGLY1Q96IV0 654 aa12.3□□□□□ -0.44
TMEM254-208ENST00000463209 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
TMEM254-208ENST00000463209 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
TMEM254-208ENST00000463209 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
TMEM254-208ENST00000463209 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
TMEM254-208ENST00000463209 ZNF772Q68DY9 489 aaPredicted RBP12.28□□□□□ -0.44
TMEM254-208ENST00000463209 ACEP12821 1306 aa12.28□□□□□ -0.44
TMEM254-208ENST00000463209 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.44
TMEM254-208ENST00000463209 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
TMEM254-208ENST00000463209 USP21Q9UK80 565 aa12.26□□□□□ -0.45
TMEM254-208ENST00000463209 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
TMEM254-208ENST00000463209 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
TMEM254-208ENST00000463209 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms