RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
HDAC1-203ENST00000463172 SHPRHQ149N8 1683 aa19.04■□□□□ 0.64
HDAC1-203ENST00000463172 LRRC59Q96AG4 307 aaKnown RBP19.03■□□□□ 0.64
HDAC1-203ENST00000463172 SOCS7O14512 581 aa19.02■□□□□ 0.64
HDAC1-203ENST00000463172 WAPLQ7Z5K2 1190 aa19.02■□□□□ 0.64
HDAC1-203ENST00000463172 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
HDAC1-203ENST00000463172 POGKQ9P215 609 aa18.99■□□□□ 0.63
HDAC1-203ENST00000463172 ESCO1Q5FWF5 840 aa18.98■□□□□ 0.63
HDAC1-203ENST00000463172 DLC1Q96QB1 1528 aa18.98■□□□□ 0.63
HDAC1-203ENST00000463172 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
HDAC1-203ENST00000463172 ORAI2Q96SN7 254 aa18.96■□□□□ 0.63
HDAC1-203ENST00000463172 NPHP3Q7Z494 1330 aa18.96■□□□□ 0.63
HDAC1-203ENST00000463172 PLEKHH1Q9ULM0 1364 aa18.95■□□□□ 0.62
HDAC1-203ENST00000463172 FMN2Q9NZ56 1722 aa18.95■□□□□ 0.62
HDAC1-203ENST00000463172 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
HDAC1-203ENST00000463172 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
HDAC1-203ENST00000463172 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
HDAC1-203ENST00000463172 KIAA1210Q9ULL0 1709 aa18.92■□□□□ 0.62
HDAC1-203ENST00000463172 NUTM2BA6NNL0 878 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-203ENST00000463172 NUTM2EB1AL46 878 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-203ENST00000463172 NUTM2AQ8IVF1 878 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-203ENST00000463172 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
HDAC1-203ENST00000463172 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-203ENST00000463172 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
HDAC1-203ENST00000463172 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
HDAC1-203ENST00000463172 SAFB2Q14151 953 aaKnown RBP eCLIP18.91■□□□□ 0.62
HDAC1-203ENST00000463172 ZNF772Q68DY9 489 aaPredicted RBP18.91■□□□□ 0.62
HDAC1-203ENST00000463172 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
HDAC1-203ENST00000463172 PNPLA6Q8IY17 1366 aa18.9■□□□□ 0.62
HDAC1-203ENST00000463172 LRP6O75581 1613 aa18.89■□□□□ 0.62
HDAC1-203ENST00000463172 RGS17Q9UGC6 210 aaPredicted RBP18.89■□□□□ 0.61
HDAC1-203ENST00000463172 FOXO3O43524 673 aa18.88■□□□□ 0.61
HDAC1-203ENST00000463172 ADGRB2O60241 1585 aa18.88■□□□□ 0.61
HDAC1-203ENST00000463172 ANKARQ7Z5J8 1434 aa18.87■□□□□ 0.61
HDAC1-203ENST00000463172 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
HDAC1-203ENST00000463172 PSME1Q06323 249 aa18.85■□□□□ 0.61
HDAC1-203ENST00000463172 PHF8Q9UPP1 1060 aa18.85■□□□□ 0.61
HDAC1-203ENST00000463172 ARHGEF28Q8N1W1 1705 aaKnown RBP18.85■□□□□ 0.61
HDAC1-203ENST00000463172 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
HDAC1-203ENST00000463172 PXDNQ92626 1479 aa18.84■□□□□ 0.61
HDAC1-203ENST00000463172 COL22A1Q8NFW1 1626 aaPredicted RBP18.83■□□□□ 0.61
HDAC1-203ENST00000463172 NEUROD1Q13562 356 aa18.83■□□□□ 0.6
HDAC1-203ENST00000463172 POTEAQ6S8J7 498 aa18.83■□□□□ 0.6
HDAC1-203ENST00000463172 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
HDAC1-203ENST00000463172 WASLO00401 505 aaPredicted RBP18.81■□□□□ 0.6
HDAC1-203ENST00000463172 XPCQ01831 940 aaPredicted RBP18.81■□□□□ 0.6
HDAC1-203ENST00000463172 KRT28Q7Z3Y7 464 aa18.81■□□□□ 0.6
HDAC1-203ENST00000463172 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
HDAC1-203ENST00000463172 C8orf37Q96NL8 207 aa18.81■□□□□ 0.6
HDAC1-203ENST00000463172 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
HDAC1-203ENST00000463172 SIN3AQ96ST3 1273 aa18.8■□□□□ 0.6
HDAC1-203ENST00000463172 AFF2P51816 1311 aa18.79■□□□□ 0.6
HDAC1-203ENST00000463172 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
HDAC1-203ENST00000463172 NGLY1Q96IV0 654 aa18.79■□□□□ 0.6
HDAC1-203ENST00000463172 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
HDAC1-203ENST00000463172 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
HDAC1-203ENST00000463172 GPRASP1Q5JY77 1395 aa18.77■□□□□ 0.6
HDAC1-203ENST00000463172 USP32Q8NFA0 1604 aa18.76■□□□□ 0.59
HDAC1-203ENST00000463172 RXRBP28702 533 aa18.76■□□□□ 0.59
HDAC1-203ENST00000463172 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
HDAC1-203ENST00000463172 SBNO1A3KN83 1393 aa18.76■□□□□ 0.59
HDAC1-203ENST00000463172 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
HDAC1-203ENST00000463172 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
HDAC1-203ENST00000463172 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
HDAC1-203ENST00000463172 ARHGEF10O15013 1369 aa18.75■□□□□ 0.59
HDAC1-203ENST00000463172 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
HDAC1-203ENST00000463172 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-203ENST00000463172 TONSLQ96HA7 1378 aa18.73■□□□□ 0.59
HDAC1-203ENST00000463172 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
HDAC1-203ENST00000463172 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
HDAC1-203ENST00000463172 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
HDAC1-203ENST00000463172 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
HDAC1-203ENST00000463172 CDK19Q9BWU1 502 aa18.72■□□□□ 0.59
HDAC1-203ENST00000463172 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
HDAC1-203ENST00000463172 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
HDAC1-203ENST00000463172 USP21Q9UK80 565 aa18.71■□□□□ 0.59
HDAC1-203ENST00000463172 RBM6P78332 1123 aaKnown RBP18.7■□□□□ 0.58
HDAC1-203ENST00000463172 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-203ENST00000463172 CDK12Q9NYV4 1490 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-203ENST00000463172 PRR36Q9H6K5 1346 aa18.7■□□□□ 0.58
HDAC1-203ENST00000463172 QRICH2Q9H0J4 1663 aa18.69■□□□□ 0.58
HDAC1-203ENST00000463172 ATP7BP35670 1465 aa18.69■□□□□ 0.58
HDAC1-203ENST00000463172 SRPK2P78362 688 aaKnown RBP18.68■□□□□ 0.58
HDAC1-203ENST00000463172 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
HDAC1-203ENST00000463172 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
HDAC1-203ENST00000463172 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
HDAC1-203ENST00000463172 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
HDAC1-203ENST00000463172 TOPAZ1Q8N9V7 1692 aa18.65■□□□□ 0.58
HDAC1-203ENST00000463172 EVC2Q86UK5 1308 aa18.64■□□□□ 0.57
HDAC1-203ENST00000463172 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
HDAC1-203ENST00000463172 PLEKHG3A1L390 1219 aa18.62■□□□□ 0.57
HDAC1-203ENST00000463172 PLEKHG5O94827 1062 aa18.62■□□□□ 0.57
HDAC1-203ENST00000463172 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
HDAC1-203ENST00000463172 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.62■□□□□ 0.57
HDAC1-203ENST00000463172 ATRNO75882 1429 aa18.61■□□□□ 0.57
HDAC1-203ENST00000463172 POLR3AO14802 1390 aaPredicted RBP18.61■□□□□ 0.57
HDAC1-203ENST00000463172 ACEP12821 1306 aa18.61■□□□□ 0.57
HDAC1-203ENST00000463172 CABLES1Q8TDN4 633 aa18.61■□□□□ 0.57
HDAC1-203ENST00000463172 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
HDAC1-203ENST00000463172 PPIP5K1Q6PFW1 1433 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms