RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 KIAA1210Q9ULL0 1709 aa33.45■■■□□ 2.95
LIMK2-206ENST00000462625 C1orf167Q5SNV9 1468 aa33.45■■■□□ 2.95
LIMK2-206ENST00000462625 PLEKHH1Q9ULM0 1364 aa33.45■■■□□ 2.94
LIMK2-206ENST00000462625 POGKQ9P215 609 aa33.44■■■□□ 2.94
LIMK2-206ENST00000462625 COL16A1Q07092 1604 aaPredicted RBP33.43■■■□□ 2.94
LIMK2-206ENST00000462625 PRAM1Q96QH2 718 aa33.42■■■□□ 2.94
LIMK2-206ENST00000462625 TRAK1Q9UPV9 953 aa33.42■■■□□ 2.94
LIMK2-206ENST00000462625 NHSL1Q5SYE7 1610 aa33.41■■■□□ 2.94
LIMK2-206ENST00000462625 JCADQ9P266 1359 aa33.4■■■□□ 2.94
LIMK2-206ENST00000462625 L3MBTL2Q969R5 705 aa33.39■■■□□ 2.94
LIMK2-206ENST00000462625 SAFB2Q14151 953 aaKnown RBP eCLIP33.36■■■□□ 2.93
LIMK2-206ENST00000462625 FMN2Q9NZ56 1722 aa33.36■■■□□ 2.93
LIMK2-206ENST00000462625 ORAI2Q96SN7 254 aa33.35■■■□□ 2.93
LIMK2-206ENST00000462625 ESCO1Q5FWF5 840 aa33.33■■■□□ 2.93
LIMK2-206ENST00000462625 PHF23Q9BUL5 403 aaPredicted RBP33.33■■■□□ 2.93
LIMK2-206ENST00000462625 ARHGEF28Q8N1W1 1705 aaKnown RBP33.31■■■□□ 2.92
LIMK2-206ENST00000462625 SHPRHQ149N8 1683 aa33.3■■■□□ 2.92
LIMK2-206ENST00000462625 NUTM2FA1L443 756 aa33.3■■■□□ 2.92
LIMK2-206ENST00000462625 LRRC59Q96AG4 307 aaKnown RBP33.3■■■□□ 2.92
LIMK2-206ENST00000462625 DDX17Q92841 729 aaKnown RBP33.26■■■□□ 2.91
LIMK2-206ENST00000462625 SPATA31A6Q5VVP1 1343 aa33.26■■■□□ 2.91
LIMK2-206ENST00000462625 ADGRB2O60241 1585 aa33.26■■■□□ 2.91
LIMK2-206ENST00000462625 RGPD8O14715 1765 aaPredicted RBP33.25■■■□□ 2.91
LIMK2-206ENST00000462625 NBPF1Q3BBV0 1214 aa33.25■■■□□ 2.91
LIMK2-206ENST00000462625 NPHP3Q7Z494 1330 aa33.24■■■□□ 2.91
LIMK2-206ENST00000462625 MINK1Q8N4C8 1332 aaPredicted RBP33.24■■■□□ 2.91
LIMK2-206ENST00000462625 PCGF6Q9BYE7 350 aa33.23■■■□□ 2.91
LIMK2-206ENST00000462625 KIF1AQ12756 1690 aa33.23■■■□□ 2.91
LIMK2-206ENST00000462625 TONSLQ96HA7 1378 aa33.22■■■□□ 2.91
LIMK2-206ENST00000462625 EIF3AQ14152 1382 aaKnown RBP33.21■■■□□ 2.91
LIMK2-206ENST00000462625 TRPM1Q7Z4N2 1603 aa33.2■■■□□ 2.91
LIMK2-206ENST00000462625 HIRIP3Q9BW71 556 aaPredicted RBP33.2■■■□□ 2.91
LIMK2-206ENST00000462625 SOS2Q07890 1332 aaPredicted RBP33.2■■■□□ 2.91
LIMK2-206ENST00000462625 FOXO3O43524 673 aa33.17■■■□□ 2.9
LIMK2-206ENST00000462625 ANKARQ7Z5J8 1434 aa33.17■■■□□ 2.9
LIMK2-206ENST00000462625 WASLO00401 505 aaPredicted RBP33.15■■■□□ 2.9
LIMK2-206ENST00000462625 PHF8Q9UPP1 1060 aa33.14■■■□□ 2.9
LIMK2-206ENST00000462625 MEX3CQ5U5Q3 659 aaKnown RBP33.13■■■□□ 2.89
LIMK2-206ENST00000462625 ROCK2O75116 1388 aaKnown RBP33.12■■■□□ 2.89
LIMK2-206ENST00000462625 PNPLA6Q8IY17 1366 aa33.12■■■□□ 2.89
LIMK2-206ENST00000462625 NUTM2BA6NNL0 878 aaPredicted RBP33.11■■■□□ 2.89
LIMK2-206ENST00000462625 NUTM2EB1AL46 878 aaPredicted RBP33.11■■■□□ 2.89
LIMK2-206ENST00000462625 ILDR2Q71H61 639 aa33.11■■■□□ 2.89
LIMK2-206ENST00000462625 NUTM2AQ8IVF1 878 aaPredicted RBP33.11■■■□□ 2.89
LIMK2-206ENST00000462625 USP32Q8NFA0 1604 aa33.1■■■□□ 2.89
LIMK2-206ENST00000462625 TULP4Q9NRJ4 1543 aa33.1■■■□□ 2.89
LIMK2-206ENST00000462625 PXDNQ92626 1479 aa33.09■■■□□ 2.89
LIMK2-206ENST00000462625 CENPJQ9HC77 1338 aaPredicted RBP33.08■■■□□ 2.89
LIMK2-206ENST00000462625 LRP6O75581 1613 aa33.07■■■□□ 2.88
LIMK2-206ENST00000462625 XPCQ01831 940 aaPredicted RBP33.07■■■□□ 2.88
LIMK2-206ENST00000462625 ITSN1Q15811 1721 aa33.06■■■□□ 2.88
LIMK2-206ENST00000462625 PSME1Q06323 249 aa33.06■■■□□ 2.88
LIMK2-206ENST00000462625 QRICH2Q9H0J4 1663 aa33.05■■■□□ 2.88
LIMK2-206ENST00000462625 NBPF8Q3BBV2 869 aa33.05■■■□□ 2.88
LIMK2-206ENST00000462625 KRT28Q7Z3Y7 464 aa33.05■■■□□ 2.88
LIMK2-206ENST00000462625 PMFBP1Q8TBY8 1022 aa33.03■■■□□ 2.88
LIMK2-206ENST00000462625 CDK19Q9BWU1 502 aa33.03■■■□□ 2.88
LIMK2-206ENST00000462625 CLSPNQ9HAW4 1339 aa33.02■■■□□ 2.88
LIMK2-206ENST00000462625 RGS17Q9UGC6 210 aaPredicted RBP33.01■■■□□ 2.87
LIMK2-206ENST00000462625 COL22A1Q8NFW1 1626 aaPredicted RBP33.01■■■□□ 2.87
LIMK2-206ENST00000462625 PRR36Q9H6K5 1346 aa33■■■□□ 2.87
LIMK2-206ENST00000462625 NUDT16Q96DE0 195 aaKnown RBP32.99■■■□□ 2.87
LIMK2-206ENST00000462625 GPRASP1Q5JY77 1395 aa32.97■■■□□ 2.87
LIMK2-206ENST00000462625 SPATA31A3Q5VYP0 1347 aa32.97■■■□□ 2.87
LIMK2-206ENST00000462625 NGDNQ8NEJ9 315 aaKnown RBP32.96■■■□□ 2.87
LIMK2-206ENST00000462625 CARD11Q9BXL7 1154 aa32.96■■■□□ 2.87
LIMK2-206ENST00000462625 ATP7BP35670 1465 aa32.95■■■□□ 2.87
LIMK2-206ENST00000462625 RALGAPBQ86X10 1494 aa32.95■■■□□ 2.87
LIMK2-206ENST00000462625 SRPK2P78362 688 aaKnown RBP32.94■■■□□ 2.86
LIMK2-206ENST00000462625 ZNF772Q68DY9 489 aaPredicted RBP32.94■■■□□ 2.86
LIMK2-206ENST00000462625 SBNO1A3KN83 1393 aa32.93■■■□□ 2.86
LIMK2-206ENST00000462625 CCDC61Q9Y6R9 512 aa32.92■■■□□ 2.86
LIMK2-206ENST00000462625 TNS3Q68CZ2 1445 aa32.92■■■□□ 2.86
LIMK2-206ENST00000462625 ADAMTS2O95450 1211 aa32.91■■■□□ 2.86
LIMK2-206ENST00000462625 C8orf37Q96NL8 207 aa32.9■■■□□ 2.86
LIMK2-206ENST00000462625 TIMELESSQ9UNS1 1208 aa32.9■■■□□ 2.86
LIMK2-206ENST00000462625 TOPAZ1Q8N9V7 1692 aa32.89■■■□□ 2.86
LIMK2-206ENST00000462625 EVC2Q86UK5 1308 aa32.89■■■□□ 2.86
LIMK2-206ENST00000462625 LMOD2Q6P5Q4 547 aa32.89■■■□□ 2.86
LIMK2-206ENST00000462625 ARHGEF10O15013 1369 aa32.88■■■□□ 2.85
LIMK2-206ENST00000462625 POTEAQ6S8J7 498 aa32.88■■■□□ 2.85
LIMK2-206ENST00000462625 CCER1Q8TC90 406 aaPredicted RBP32.87■■■□□ 2.85
LIMK2-206ENST00000462625 NGLY1Q96IV0 654 aa32.87■■■□□ 2.85
LIMK2-206ENST00000462625 MARF1Q9Y4F3 1742 aaKnown RBP32.86■■■□□ 2.85
LIMK2-206ENST00000462625 AFF2P51816 1311 aa32.86■■■□□ 2.85
LIMK2-206ENST00000462625 TRPM3Q9HCF6 1732 aaPredicted RBP32.85■■■□□ 2.85
LIMK2-206ENST00000462625 SOCS7O14512 581 aa32.85■■■□□ 2.85
LIMK2-206ENST00000462625 CABP2Q9NPB3 220 aa32.85■■■□□ 2.85
LIMK2-206ENST00000462625 PLEKHG3A1L390 1219 aa32.83■■■□□ 2.85
LIMK2-206ENST00000462625 HAP1P54257 671 aaPredicted RBP32.83■■■□□ 2.85
LIMK2-206ENST00000462625 PPIP5K1Q6PFW1 1433 aa32.8■■■□□ 2.84
LIMK2-206ENST00000462625 PAK3O75914 559 aaPredicted RBP32.8■■■□□ 2.84
LIMK2-206ENST00000462625 POLR3AO14802 1390 aaPredicted RBP32.8■■■□□ 2.84
LIMK2-206ENST00000462625 ACEP12821 1306 aa32.79■■■□□ 2.84
LIMK2-206ENST00000462625 ALS2Q96Q42 1657 aa32.79■■■□□ 2.84
LIMK2-206ENST00000462625 SBNO2Q9Y2G9 1366 aa32.77■■■□□ 2.84
LIMK2-206ENST00000462625 PLEKHG5O94827 1062 aa32.74■■■□□ 2.83
LIMK2-206ENST00000462625 CABLES1Q8TDN4 633 aa32.73■■■□□ 2.83
LIMK2-206ENST00000462625 ABCA3Q99758 1704 aa32.73■■■□□ 2.83
LIMK2-206ENST00000462625 RXRBP28702 533 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms