RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 SIRT1Q96EB6 747 aa20.12■□□□□ 0.81
PCOLCE-203ENST00000462260 LRP6O75581 1613 aa20.12■□□□□ 0.81
PCOLCE-203ENST00000462260 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
PCOLCE-203ENST00000462260 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
PCOLCE-203ENST00000462260 ORAI2Q96SN7 254 aa20.11■□□□□ 0.81
PCOLCE-203ENST00000462260 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
PCOLCE-203ENST00000462260 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
PCOLCE-203ENST00000462260 POTEAQ6S8J7 498 aa20.08■□□□□ 0.81
PCOLCE-203ENST00000462260 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.81
PCOLCE-203ENST00000462260 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
PCOLCE-203ENST00000462260 SOS2Q07890 1332 aaPredicted RBP20.06■□□□□ 0.8
PCOLCE-203ENST00000462260 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
PCOLCE-203ENST00000462260 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
PCOLCE-203ENST00000462260 PNPLA6Q8IY17 1366 aa20.05■□□□□ 0.8
PCOLCE-203ENST00000462260 ESCO1Q5FWF5 840 aa20.04■□□□□ 0.8
PCOLCE-203ENST00000462260 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
PCOLCE-203ENST00000462260 MEX3CQ5U5Q3 659 aaKnown RBP20.03■□□□□ 0.8
PCOLCE-203ENST00000462260 FMN2Q9NZ56 1722 aa20.02■□□□□ 0.8
PCOLCE-203ENST00000462260 NUTM2BA6NNL0 878 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-203ENST00000462260 NUTM2EB1AL46 878 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-203ENST00000462260 NUTM2AQ8IVF1 878 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-203ENST00000462260 NUTM2FA1L443 756 aa20.01■□□□□ 0.79
PCOLCE-203ENST00000462260 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
PCOLCE-203ENST00000462260 NPHP3Q7Z494 1330 aa20.01■□□□□ 0.79
PCOLCE-203ENST00000462260 PXDNQ92626 1479 aa19.99■□□□□ 0.79
PCOLCE-203ENST00000462260 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
PCOLCE-203ENST00000462260 FOXO3O43524 673 aa19.97■□□□□ 0.79
PCOLCE-203ENST00000462260 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCOLCE-203ENST00000462260 POGKQ9P215 609 aa19.97■□□□□ 0.79
PCOLCE-203ENST00000462260 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
PCOLCE-203ENST00000462260 KIF1AQ12756 1690 aa19.95■□□□□ 0.78
PCOLCE-203ENST00000462260 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
PCOLCE-203ENST00000462260 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
PCOLCE-203ENST00000462260 RGPD8O14715 1765 aaPredicted RBP19.93■□□□□ 0.78
PCOLCE-203ENST00000462260 XPCQ01831 940 aaPredicted RBP19.93■□□□□ 0.78
PCOLCE-203ENST00000462260 AFF2P51816 1311 aa19.93■□□□□ 0.78
PCOLCE-203ENST00000462260 C8orf37Q96NL8 207 aa19.91■□□□□ 0.78
PCOLCE-203ENST00000462260 ANKARQ7Z5J8 1434 aa19.91■□□□□ 0.78
PCOLCE-203ENST00000462260 KIAA1210Q9ULL0 1709 aa19.9■□□□□ 0.78
PCOLCE-203ENST00000462260 ADAMTS2O95450 1211 aa19.9■□□□□ 0.78
PCOLCE-203ENST00000462260 PHF8Q9UPP1 1060 aa19.9■□□□□ 0.78
PCOLCE-203ENST00000462260 USP32Q8NFA0 1604 aa19.9■□□□□ 0.78
PCOLCE-203ENST00000462260 ARHGEF28Q8N1W1 1705 aaKnown RBP19.89■□□□□ 0.77
PCOLCE-203ENST00000462260 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
PCOLCE-203ENST00000462260 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
PCOLCE-203ENST00000462260 SPATA31A3Q5VYP0 1347 aa19.87■□□□□ 0.77
PCOLCE-203ENST00000462260 KRT28Q7Z3Y7 464 aa19.87■□□□□ 0.77
PCOLCE-203ENST00000462260 RXRBP28702 533 aa19.86■□□□□ 0.77
PCOLCE-203ENST00000462260 NGLY1Q96IV0 654 aa19.86■□□□□ 0.77
PCOLCE-203ENST00000462260 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
PCOLCE-203ENST00000462260 WASLO00401 505 aaPredicted RBP19.85■□□□□ 0.77
PCOLCE-203ENST00000462260 TULP4Q9NRJ4 1543 aa19.85■□□□□ 0.77
PCOLCE-203ENST00000462260 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
PCOLCE-203ENST00000462260 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
PCOLCE-203ENST00000462260 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
PCOLCE-203ENST00000462260 PRR36Q9H6K5 1346 aa19.83■□□□□ 0.77
PCOLCE-203ENST00000462260 PSME1Q06323 249 aa19.83■□□□□ 0.77
PCOLCE-203ENST00000462260 FNBP4Q8N3X1 1017 aaPredicted RBP19.83■□□□□ 0.77
PCOLCE-203ENST00000462260 QTRT2Q9H974 415 aaKnown RBP19.83■□□□□ 0.77
PCOLCE-203ENST00000462260 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.76
PCOLCE-203ENST00000462260 TNS3Q68CZ2 1445 aa19.83■□□□□ 0.76
PCOLCE-203ENST00000462260 PMFBP1Q8TBY8 1022 aa19.82■□□□□ 0.76
PCOLCE-203ENST00000462260 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
PCOLCE-203ENST00000462260 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
PCOLCE-203ENST00000462260 RBM6P78332 1123 aaKnown RBP19.79■□□□□ 0.76
PCOLCE-203ENST00000462260 USP21Q9UK80 565 aa19.79■□□□□ 0.76
PCOLCE-203ENST00000462260 ATP7BP35670 1465 aa19.78■□□□□ 0.76
PCOLCE-203ENST00000462260 NEUROD1Q13562 356 aa19.77■□□□□ 0.76
PCOLCE-203ENST00000462260 ARHGEF10O15013 1369 aa19.77■□□□□ 0.76
PCOLCE-203ENST00000462260 TRPM3Q9HCF6 1732 aaPredicted RBP19.76■□□□□ 0.75
PCOLCE-203ENST00000462260 BCL9LQ86UU0 1499 aa19.76■□□□□ 0.75
PCOLCE-203ENST00000462260 ATRNO75882 1429 aa19.76■□□□□ 0.75
PCOLCE-203ENST00000462260 GPRASP1Q5JY77 1395 aa19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 NUDT16Q96DE0 195 aaKnown RBP19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 CDK19Q9BWU1 502 aa19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 TRPC5Q9UL62 973 aaPredicted RBP19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 ITSN1Q15811 1721 aa19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 RGS12O14924 1447 aa19.75■□□□□ 0.75
PCOLCE-203ENST00000462260 TRPM1Q7Z4N2 1603 aa19.74■□□□□ 0.75
PCOLCE-203ENST00000462260 ALS2Q96Q42 1657 aa19.73■□□□□ 0.75
PCOLCE-203ENST00000462260 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
PCOLCE-203ENST00000462260 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
PCOLCE-203ENST00000462260 CABLES1Q8TDN4 633 aa19.73■□□□□ 0.75
PCOLCE-203ENST00000462260 CENPJQ9HC77 1338 aaPredicted RBP19.73■□□□□ 0.75
PCOLCE-203ENST00000462260 SLIT2O94813 1529 aa19.72■□□□□ 0.75
PCOLCE-203ENST00000462260 ABCA3Q99758 1704 aa19.72■□□□□ 0.75
PCOLCE-203ENST00000462260 TOPAZ1Q8N9V7 1692 aa19.71■□□□□ 0.75
PCOLCE-203ENST00000462260 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
PCOLCE-203ENST00000462260 HAP1P54257 671 aaPredicted RBP19.7■□□□□ 0.74
PCOLCE-203ENST00000462260 CCDC61Q9Y6R9 512 aa19.7■□□□□ 0.74
PCOLCE-203ENST00000462260 UNC5CLQ8IV45 518 aa19.69■□□□□ 0.74
PCOLCE-203ENST00000462260 UPF1Q92900 1129 aaKnown RBP eCLIP19.69■□□□□ 0.74
PCOLCE-203ENST00000462260 POLR3AO14802 1390 aaPredicted RBP19.69■□□□□ 0.74
PCOLCE-203ENST00000462260 QRICH2Q9H0J4 1663 aa19.68■□□□□ 0.74
PCOLCE-203ENST00000462260 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
PCOLCE-203ENST00000462260 ROCK2O75116 1388 aaKnown RBP19.67■□□□□ 0.74
PCOLCE-203ENST00000462260 PLEKHG5O94827 1062 aa19.66■□□□□ 0.74
PCOLCE-203ENST00000462260 NBPF8Q3BBV2 869 aa19.66■□□□□ 0.74
PCOLCE-203ENST00000462260 GJD4Q96KN9 370 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms