RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 RAB3GAP2Q9H2M9 1393 aa10.9□□□□□ -0.67
RTN4-212ENST00000461004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.89□□□□□ -0.67
RTN4-212ENST00000461004 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
RTN4-212ENST00000461004 IQGAP3Q86VI3 1631 aa10.88□□□□□ -0.67
RTN4-212ENST00000461004 IDI1Q13907 227 aa10.88□□□□□ -0.67
RTN4-212ENST00000461004 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
RTN4-212ENST00000461004 SPATA31D1Q6ZQQ2 1576 aa10.88□□□□□ -0.67
RTN4-212ENST00000461004 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
RTN4-212ENST00000461004 PREX1Q8TCU6 1659 aa10.88□□□□□ -0.67
RTN4-212ENST00000461004 NOS1P29475 1434 aa10.87□□□□□ -0.67
RTN4-212ENST00000461004 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
RTN4-212ENST00000461004 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
RTN4-212ENST00000461004 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
RTN4-212ENST00000461004 E9PCH4 1651 aa10.86□□□□□ -0.67
RTN4-212ENST00000461004 TET3O43151 1660 aa10.86□□□□□ -0.67
RTN4-212ENST00000461004 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
RTN4-212ENST00000461004 MPHOSPH9Q99550 1183 aa10.86□□□□□ -0.67
RTN4-212ENST00000461004 SYNMO15061 1565 aa10.86□□□□□ -0.67
RTN4-212ENST00000461004 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
RTN4-212ENST00000461004 A2ML1A8K2U0 1454 aa10.85□□□□□ -0.67
RTN4-212ENST00000461004 UGGT1Q9NYU2 1555 aa10.85□□□□□ -0.67
RTN4-212ENST00000461004 CEP170BQ9Y4F5 1589 aaPredicted RBP10.85□□□□□ -0.67
RTN4-212ENST00000461004 PLA2R1Q13018 1463 aa10.83□□□□□ -0.68
RTN4-212ENST00000461004 NLRP1Q9C000 1473 aa10.83□□□□□ -0.68
RTN4-212ENST00000461004 IER5LQ5T953 404 aa10.83□□□□□ -0.68
RTN4-212ENST00000461004 COLQQ9Y215 455 aaPredicted RBP10.83□□□□□ -0.68
RTN4-212ENST00000461004 RPRD2Q5VT52 1461 aaKnown RBP10.82□□□□□ -0.68
RTN4-212ENST00000461004 POTEFA5A3E0 1075 aa10.82□□□□□ -0.68
RTN4-212ENST00000461004 PTPRTO14522 1441 aa10.82□□□□□ -0.68
RTN4-212ENST00000461004 THEMISQ8N1K5 641 aaPredicted RBP10.81□□□□□ -0.68
RTN4-212ENST00000461004 ZNF142P52746 1687 aaPredicted RBP10.81□□□□□ -0.68
RTN4-212ENST00000461004 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
RTN4-212ENST00000461004 STRCQ7RTU9 1775 aa10.8□□□□□ -0.68
RTN4-212ENST00000461004 HRCP23327 699 aa10.8□□□□□ -0.68
RTN4-212ENST00000461004 LTKP29376 864 aa10.8□□□□□ -0.68
RTN4-212ENST00000461004 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
RTN4-212ENST00000461004 SLC52A1Q9NWF4 448 aa10.8□□□□□ -0.68
RTN4-212ENST00000461004 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
RTN4-212ENST00000461004 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
RTN4-212ENST00000461004 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
RTN4-212ENST00000461004 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.69
RTN4-212ENST00000461004 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.69
RTN4-212ENST00000461004 SPHKAPQ2M3C7 1700 aa10.76□□□□□ -0.69
RTN4-212ENST00000461004 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
RTN4-212ENST00000461004 CLTCL1P53675 1640 aa10.76□□□□□ -0.69
RTN4-212ENST00000461004 TMEM2Q9UHN6 1383 aa10.76□□□□□ -0.69
RTN4-212ENST00000461004 ARHGAP23Q9P227 1491 aa10.75□□□□□ -0.69
RTN4-212ENST00000461004 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
RTN4-212ENST00000461004 PLCG2P16885 1265 aa10.75□□□□□ -0.69
RTN4-212ENST00000461004 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
RTN4-212ENST00000461004 TMEM131LA2VDJ0 1609 aa10.75□□□□□ -0.69
RTN4-212ENST00000461004 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
RTN4-212ENST00000461004 TRPM2O94759 1503 aa10.74□□□□□ -0.69
RTN4-212ENST00000461004 NEURL4Q96JN8 1562 aa10.74□□□□□ -0.69
RTN4-212ENST00000461004 C7P10643 843 aa10.74□□□□□ -0.69
RTN4-212ENST00000461004 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
RTN4-212ENST00000461004 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
RTN4-212ENST00000461004 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
RTN4-212ENST00000461004 ANKRD30BQ9BXX2 1392 aa10.73□□□□□ -0.69
RTN4-212ENST00000461004 RIMS2Q9UQ26 1411 aa10.73□□□□□ -0.69
RTN4-212ENST00000461004 SLIT1O75093 1534 aa10.73□□□□□ -0.69
RTN4-212ENST00000461004 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
RTN4-212ENST00000461004 TMEM121BQ9BXQ6 578 aaPredicted RBP10.72□□□□□ -0.69
RTN4-212ENST00000461004 EID1Q9Y6B2 187 aa10.72□□□□□ -0.69
RTN4-212ENST00000461004 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
RTN4-212ENST00000461004 ZFYVE9O95405 1425 aa10.72□□□□□ -0.69
RTN4-212ENST00000461004 SEC24BO95487 1268 aa10.71□□□□□ -0.69
RTN4-212ENST00000461004 SLC26A8Q96RN1 970 aa10.71□□□□□ -0.69
RTN4-212ENST00000461004 SCAF11Q99590 1463 aaKnown RBP10.71□□□□□ -0.69
RTN4-212ENST00000461004 ZNF335Q9H4Z2 1342 aaPredicted RBP10.71□□□□□ -0.69
RTN4-212ENST00000461004 MED14O60244 1454 aa10.7□□□□□ -0.7
RTN4-212ENST00000461004 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
RTN4-212ENST00000461004 BOLA1Q9Y3E2 137 aa10.7□□□□□ -0.7
RTN4-212ENST00000461004 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
RTN4-212ENST00000461004 DHX57Q6P158 1386 aaKnown RBP10.69□□□□□ -0.7
RTN4-212ENST00000461004 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
RTN4-212ENST00000461004 BCANQ96GW7 911 aa10.69□□□□□ -0.7
RTN4-212ENST00000461004 SIN3AQ96ST3 1273 aa10.69□□□□□ -0.7
RTN4-212ENST00000461004 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
RTN4-212ENST00000461004 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
RTN4-212ENST00000461004 SPATA31E1Q6ZUB1 1445 aa10.68□□□□□ -0.7
RTN4-212ENST00000461004 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.67□□□□□ -0.7
RTN4-212ENST00000461004 NEXMIFQ5QGS0 1516 aa10.67□□□□□ -0.7
RTN4-212ENST00000461004 IQGAP1P46940 1657 aa10.66□□□□□ -0.7
RTN4-212ENST00000461004 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
RTN4-212ENST00000461004 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
RTN4-212ENST00000461004 KIF1BO60333 1816 aa10.66□□□□□ -0.7
RTN4-212ENST00000461004 HDGFP51858 240 aaKnown RBP10.66□□□□□ -0.7
RTN4-212ENST00000461004 ADAMTS13Q76LX8 1427 aa10.65□□□□□ -0.7
RTN4-212ENST00000461004 LTBP4Q8N2S1 1624 aa10.65□□□□□ -0.7
RTN4-212ENST00000461004 RPGRIP1LQ68CZ1 1315 aa10.64□□□□□ -0.71
RTN4-212ENST00000461004 NEUROD1Q13562 356 aa10.64□□□□□ -0.71
RTN4-212ENST00000461004 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
RTN4-212ENST00000461004 MFSD10Q14728 455 aa10.63□□□□□ -0.71
RTN4-212ENST00000461004 TMEM92Q6UXU6 159 aa10.63□□□□□ -0.71
RTN4-212ENST00000461004 CERKQ8TCT0 537 aa10.63□□□□□ -0.71
RTN4-212ENST00000461004 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
RTN4-212ENST00000461004 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
RTN4-212ENST00000461004 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
RTN4-212ENST00000461004 L3MBTL3Q96JM7 780 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms