RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ITGAEP38570 1179 aa20.64■□□□□ 0.89
SCAMP4-206ENST00000460767 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
SCAMP4-206ENST00000460767 CCDC125Q86Z20 511 aa20.64■□□□□ 0.89
SCAMP4-206ENST00000460767 ROBO2Q9HCK4 1378 aa20.63■□□□□ 0.89
SCAMP4-206ENST00000460767 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
SCAMP4-206ENST00000460767 BCL9LQ86UU0 1499 aa20.62■□□□□ 0.89
SCAMP4-206ENST00000460767 PXDNQ92626 1479 aa20.61■□□□□ 0.89
SCAMP4-206ENST00000460767 ORAI2Q96SN7 254 aa20.59■□□□□ 0.89
SCAMP4-206ENST00000460767 PPLO60437 1756 aa20.58■□□□□ 0.89
SCAMP4-206ENST00000460767 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
SCAMP4-206ENST00000460767 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
SCAMP4-206ENST00000460767 RPGRIP1LQ68CZ1 1315 aa20.54■□□□□ 0.88
SCAMP4-206ENST00000460767 GLI3P10071 1580 aa20.54■□□□□ 0.88
SCAMP4-206ENST00000460767 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
SCAMP4-206ENST00000460767 SLIT2O94813 1529 aa20.53■□□□□ 0.88
SCAMP4-206ENST00000460767 LRP5O75197 1615 aa20.53■□□□□ 0.88
SCAMP4-206ENST00000460767 TECPR2O15040 1411 aa20.53■□□□□ 0.88
SCAMP4-206ENST00000460767 GJD4Q96KN9 370 aaPredicted RBP20.52■□□□□ 0.88
SCAMP4-206ENST00000460767 LRPPRCP42704 1394 aaKnown RBP20.51■□□□□ 0.87
SCAMP4-206ENST00000460767 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
SCAMP4-206ENST00000460767 EP400Q96L91 3159 aa20.51■□□□□ 0.87
SCAMP4-206ENST00000460767 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
SCAMP4-206ENST00000460767 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
SCAMP4-206ENST00000460767 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
SCAMP4-206ENST00000460767 RALGAPBQ86X10 1494 aa20.49■□□□□ 0.87
SCAMP4-206ENST00000460767 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
SCAMP4-206ENST00000460767 BRWD3Q6RI45 1802 aa20.46■□□□□ 0.87
SCAMP4-206ENST00000460767 NWD2Q9ULI1 1742 aa20.46■□□□□ 0.87
SCAMP4-206ENST00000460767 ESCO1Q5FWF5 840 aa20.45■□□□□ 0.86
SCAMP4-206ENST00000460767 UNC5CLQ8IV45 518 aa20.44■□□□□ 0.86
SCAMP4-206ENST00000460767 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
SCAMP4-206ENST00000460767 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
SCAMP4-206ENST00000460767 FOXO3O43524 673 aa20.42■□□□□ 0.86
SCAMP4-206ENST00000460767 PLCH1Q4KWH8 1693 aa20.42■□□□□ 0.86
SCAMP4-206ENST00000460767 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
SCAMP4-206ENST00000460767 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
SCAMP4-206ENST00000460767 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
SCAMP4-206ENST00000460767 ONECUT3O60422 494 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-206ENST00000460767 TNS3Q68CZ2 1445 aa20.36■□□□□ 0.85
SCAMP4-206ENST00000460767 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-206ENST00000460767 XPCQ01831 940 aaPredicted RBP20.36■□□□□ 0.85
SCAMP4-206ENST00000460767 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
SCAMP4-206ENST00000460767 VPS72Q15906 364 aa20.35■□□□□ 0.85
SCAMP4-206ENST00000460767 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
SCAMP4-206ENST00000460767 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
SCAMP4-206ENST00000460767 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
SCAMP4-206ENST00000460767 HRCP23327 699 aa20.34■□□□□ 0.85
SCAMP4-206ENST00000460767 SF3B2Q13435 895 aaKnown RBP20.33■□□□□ 0.85
SCAMP4-206ENST00000460767 DEFB132Q7Z7B7 95 aa20.33■□□□□ 0.85
SCAMP4-206ENST00000460767 NRAPQ86VF7 1730 aa20.33■□□□□ 0.84
SCAMP4-206ENST00000460767 SBNO1A3KN83 1393 aa20.33■□□□□ 0.84
SCAMP4-206ENST00000460767 SEPT12Q8IYM1 358 aa20.32■□□□□ 0.84
SCAMP4-206ENST00000460767 NRXN1Q9ULB1 1477 aa20.31■□□□□ 0.84
SCAMP4-206ENST00000460767 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
SCAMP4-206ENST00000460767 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
SCAMP4-206ENST00000460767 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
SCAMP4-206ENST00000460767 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-206ENST00000460767 RGPD1P0DJD0 1748 aa20.3■□□□□ 0.84
SCAMP4-206ENST00000460767 YTHDC2Q9H6S0 1430 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-206ENST00000460767 RGPD8O14715 1765 aaPredicted RBP20.29■□□□□ 0.84
SCAMP4-206ENST00000460767 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
SCAMP4-206ENST00000460767 ARHGEF10O15013 1369 aa20.29■□□□□ 0.84
SCAMP4-206ENST00000460767 KRT28Q7Z3Y7 464 aa20.28■□□□□ 0.84
SCAMP4-206ENST00000460767 MPHOSPH9Q99550 1183 aa20.28■□□□□ 0.84
SCAMP4-206ENST00000460767 KRT27Q7Z3Y8 459 aa20.27■□□□□ 0.84
SCAMP4-206ENST00000460767 DISP2A7MBM2 1401 aa20.27■□□□□ 0.83
SCAMP4-206ENST00000460767 ADGRB2O60241 1585 aa20.26■□□□□ 0.83
SCAMP4-206ENST00000460767 NUTM2FA1L443 756 aa20.25■□□□□ 0.83
SCAMP4-206ENST00000460767 PSME1Q06323 249 aa20.25■□□□□ 0.83
SCAMP4-206ENST00000460767 ANKARQ7Z5J8 1434 aa20.25■□□□□ 0.83
SCAMP4-206ENST00000460767 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-206ENST00000460767 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
SCAMP4-206ENST00000460767 BAG6P46379 1132 aa20.24■□□□□ 0.83
SCAMP4-206ENST00000460767 THSD7AQ9UPZ6 1657 aa20.23■□□□□ 0.83
SCAMP4-206ENST00000460767 TNS1Q9HBL0 1735 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-206ENST00000460767 STK26Q9P289 416 aa20.23■□□□□ 0.83
SCAMP4-206ENST00000460767 PHF8Q9UPP1 1060 aa20.23■□□□□ 0.83
SCAMP4-206ENST00000460767 ALS2Q96Q42 1657 aa20.22■□□□□ 0.83
SCAMP4-206ENST00000460767 DLC1Q96QB1 1528 aa20.22■□□□□ 0.83
SCAMP4-206ENST00000460767 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
SCAMP4-206ENST00000460767 CRYBG1Q9Y4K1 1723 aa20.21■□□□□ 0.83
SCAMP4-206ENST00000460767 TMEM132EQ6IEE7 984 aa20.19■□□□□ 0.82
SCAMP4-206ENST00000460767 CABLES1Q8TDN4 633 aa20.18■□□□□ 0.82
SCAMP4-206ENST00000460767 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
SCAMP4-206ENST00000460767 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
SCAMP4-206ENST00000460767 CCDC9Q9Y3X0 531 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-206ENST00000460767 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-206ENST00000460767 PSDA5PKW4 1024 aaPredicted RBP20.14■□□□□ 0.81
SCAMP4-206ENST00000460767 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
SCAMP4-206ENST00000460767 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-206ENST00000460767 SPATA31A5Q5VU36 1347 aa20.12■□□□□ 0.81
SCAMP4-206ENST00000460767 SPATA31A7Q8IWB4 1347 aa20.12■□□□□ 0.81
SCAMP4-206ENST00000460767 FAM98CQ17RN3 349 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-206ENST00000460767 PARD3Q8TEW0 1356 aa20.11■□□□□ 0.81
SCAMP4-206ENST00000460767 ADGRB1O14514 1584 aa20.11■□□□□ 0.81
SCAMP4-206ENST00000460767 TULP4Q9NRJ4 1543 aa20.11■□□□□ 0.81
SCAMP4-206ENST00000460767 RREB1Q92766 1687 aa20.1■□□□□ 0.81
SCAMP4-206ENST00000460767 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
SCAMP4-206ENST00000460767 EN1Q05925 392 aaPredicted RBP20.09■□□□□ 0.81
SCAMP4-206ENST00000460767 A0A0G2JS52 829 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms