RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
CPNE6-202ENST00000460657 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
CPNE6-202ENST00000460657 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
CPNE6-202ENST00000460657 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
CPNE6-202ENST00000460657 PRAM1Q96QH2 718 aa14.99□□□□□ -0.01
CPNE6-202ENST00000460657 HMOX1P09601 288 aa14.99□□□□□ -0.01
CPNE6-202ENST00000460657 COL17A1Q9UMD9 1497 aaPredicted RBP14.98□□□□□ -0.01
CPNE6-202ENST00000460657 ADGBQ8N7X0 1667 aa14.98□□□□□ -0.01
CPNE6-202ENST00000460657 LMOD2Q6P5Q4 547 aa14.98□□□□□ -0.01
CPNE6-202ENST00000460657 ST18O60284 1047 aa14.98□□□□□ -0.01
CPNE6-202ENST00000460657 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
CPNE6-202ENST00000460657 TPRNQ4KMQ1 711 aa14.98□□□□□ -0.01
CPNE6-202ENST00000460657 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
CPNE6-202ENST00000460657 NGDNQ8NEJ9 315 aaKnown RBP14.97□□□□□ -0.01
CPNE6-202ENST00000460657 ASXL1Q8IXJ9 1541 aa14.97□□□□□ -0.01
CPNE6-202ENST00000460657 AMPHP49418 695 aa14.97□□□□□ -0.01
CPNE6-202ENST00000460657 KCNJ4P48050 445 aa14.97□□□□□ -0.01
CPNE6-202ENST00000460657 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
CPNE6-202ENST00000460657 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
CPNE6-202ENST00000460657 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
CPNE6-202ENST00000460657 SKOR2Q2VWA4 1001 aaPredicted RBP14.96□□□□□ -0.01
CPNE6-202ENST00000460657 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
CPNE6-202ENST00000460657 ATF7IPQ6VMQ6 1270 aa14.96□□□□□ -0.01
CPNE6-202ENST00000460657 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.02
CPNE6-202ENST00000460657 A2MP01023 1474 aa14.95□□□□□ -0.02
CPNE6-202ENST00000460657 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
CPNE6-202ENST00000460657 NOB1Q9ULX3 412 aaKnown RBP14.95□□□□□ -0.02
CPNE6-202ENST00000460657 ATAD2Q6PL18 1390 aa14.95□□□□□ -0.02
CPNE6-202ENST00000460657 KIAA1211Q6ZU35 1233 aa14.95□□□□□ -0.02
CPNE6-202ENST00000460657 FANCAO15360 1455 aa14.95□□□□□ -0.02
CPNE6-202ENST00000460657 DNTTIP2Q5QJE6 756 aaKnown RBP14.94□□□□□ -0.02
CPNE6-202ENST00000460657 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
CPNE6-202ENST00000460657 TRIM6-TRIM34B2RNG4 842 aa14.94□□□□□ -0.02
CPNE6-202ENST00000460657 GPRASP1Q5JY77 1395 aa14.93□□□□□ -0.02
CPNE6-202ENST00000460657 NOS1P29475 1434 aa14.93□□□□□ -0.02
CPNE6-202ENST00000460657 RAPGEF3O95398 923 aa14.93□□□□□ -0.02
CPNE6-202ENST00000460657 TMPOP42166 694 aaKnown RBP14.93□□□□□ -0.02
CPNE6-202ENST00000460657 CDK19Q9BWU1 502 aa14.93□□□□□ -0.02
CPNE6-202ENST00000460657 TRAPPC8Q9Y2L5 1435 aa14.92□□□□□ -0.02
CPNE6-202ENST00000460657 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
CPNE6-202ENST00000460657 CABP1Q9NZU7 370 aa14.92□□□□□ -0.02
CPNE6-202ENST00000460657 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
CPNE6-202ENST00000460657 C14orf93Q9H972 538 aaKnown RBP14.92□□□□□ -0.02
CPNE6-202ENST00000460657 PIK3C2GO75747 1445 aa14.91□□□□□ -0.02
CPNE6-202ENST00000460657 INSRP06213 1382 aa14.91□□□□□ -0.02
CPNE6-202ENST00000460657 PLEKHH1Q9ULM0 1364 aa14.91□□□□□ -0.02
CPNE6-202ENST00000460657 DDX49Q9Y6V7 483 aaKnown RBP14.91□□□□□ -0.02
CPNE6-202ENST00000460657 REC8O95072 547 aa14.9□□□□□ -0.02
CPNE6-202ENST00000460657 PLCB2Q00722 1185 aa14.9□□□□□ -0.02
CPNE6-202ENST00000460657 GCC1Q96CN9 775 aa14.9□□□□□ -0.02
CPNE6-202ENST00000460657 ABCC10Q5T3U5 1492 aa14.9□□□□□ -0.02
CPNE6-202ENST00000460657 FAM69CQ0P6D2 419 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 SYAP1Q96A49 352 aaPredicted RBP14.89□□□□□ -0.03
CPNE6-202ENST00000460657 KDM5CP41229 1560 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 CDC45O75419 566 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 FCHSD2O94868 740 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 BRPF3Q9ULD4 1205 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 ARHGEF5Q12774 1597 aa14.89□□□□□ -0.03
CPNE6-202ENST00000460657 TWISTNBQ3B726 338 aaPredicted RBP14.88□□□□□ -0.03
CPNE6-202ENST00000460657 IL27Q8NEV9 243 aa14.88□□□□□ -0.03
CPNE6-202ENST00000460657 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
CPNE6-202ENST00000460657 NSD2O96028 1365 aa14.88□□□□□ -0.03
CPNE6-202ENST00000460657 CD109Q6YHK3 1445 aa14.88□□□□□ -0.03
CPNE6-202ENST00000460657 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
CPNE6-202ENST00000460657 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
CPNE6-202ENST00000460657 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
CPNE6-202ENST00000460657 IGHDP01880 384 aa14.87□□□□□ -0.03
CPNE6-202ENST00000460657 FGD1P98174 961 aa14.87□□□□□ -0.03
CPNE6-202ENST00000460657 LTV1Q96GA3 475 aaPredicted RBP14.87□□□□□ -0.03
CPNE6-202ENST00000460657 DENND4BO75064 1496 aaPredicted RBP14.87□□□□□ -0.03
CPNE6-202ENST00000460657 MBD5Q9P267 1494 aa14.86□□□□□ -0.03
CPNE6-202ENST00000460657 GOLGA6L4A6NEF3 574 aa14.86□□□□□ -0.03
CPNE6-202ENST00000460657 POLR3AO14802 1390 aaPredicted RBP14.86□□□□□ -0.03
CPNE6-202ENST00000460657 SSH1Q8WYL5 1049 aa14.86□□□□□ -0.03
CPNE6-202ENST00000460657 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
CPNE6-202ENST00000460657 BLMP54132 1417 aaPredicted RBP14.86□□□□□ -0.03
CPNE6-202ENST00000460657 NPC1L1Q9UHC9 1359 aa14.86□□□□□ -0.03
CPNE6-202ENST00000460657 TRAK2O60296 914 aa14.85□□□□□ -0.03
CPNE6-202ENST00000460657 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
CPNE6-202ENST00000460657 NOL8Q76FK4 1167 aaKnown RBP14.85□□□□□ -0.03
CPNE6-202ENST00000460657 RILPL2Q969X0 211 aa14.85□□□□□ -0.03
CPNE6-202ENST00000460657 C1orf115Q9H7X2 142 aa14.85□□□□□ -0.03
CPNE6-202ENST00000460657 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
CPNE6-202ENST00000460657 ABCC2Q92887 1545 aa14.85□□□□□ -0.03
CPNE6-202ENST00000460657 MAST1Q9Y2H9 1570 aa14.84□□□□□ -0.03
CPNE6-202ENST00000460657 CHD1LQ86WJ1 897 aa14.84□□□□□ -0.03
CPNE6-202ENST00000460657 NUCB2P80303 420 aa14.84□□□□□ -0.03
CPNE6-202ENST00000460657 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
CPNE6-202ENST00000460657 GPATCH3Q96I76 525 aa14.84□□□□□ -0.03
CPNE6-202ENST00000460657 TSPYL4Q9UJ04 414 aa14.84□□□□□ -0.03
CPNE6-202ENST00000460657 ABCA8O94911 1581 aa14.83□□□□□ -0.03
CPNE6-202ENST00000460657 MRE11P49959 708 aa14.83□□□□□ -0.04
CPNE6-202ENST00000460657 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
CPNE6-202ENST00000460657 C8orf34Q49A92 452 aa14.83□□□□□ -0.04
CPNE6-202ENST00000460657 CARD14Q9BXL6 1004 aa14.83□□□□□ -0.04
CPNE6-202ENST00000460657 IDI1Q13907 227 aa14.82□□□□□ -0.04
CPNE6-202ENST00000460657 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
CPNE6-202ENST00000460657 FKBP5Q13451 457 aaPredicted RBP14.82□□□□□ -0.04
CPNE6-202ENST00000460657 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms