RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 KIAA1210Q9ULL0 1709 aa30.73■■■□□ 2.51
ABCD4-202ENST00000460308 DLC1Q96QB1 1528 aa30.72■■■□□ 2.51
ABCD4-202ENST00000460308 MST1RQ04912 1400 aa30.72■■■□□ 2.51
ABCD4-202ENST00000460308 NBPF1Q3BBV0 1214 aa30.71■■■□□ 2.51
ABCD4-202ENST00000460308 BRINP3Q76B58 766 aa30.68■■■□□ 2.5
ABCD4-202ENST00000460308 C1orf167Q5SNV9 1468 aa30.65■■■□□ 2.5
ABCD4-202ENST00000460308 CDC42BPGQ6DT37 1551 aa30.65■■■□□ 2.5
ABCD4-202ENST00000460308 CLSPNQ9HAW4 1339 aa30.64■■■□□ 2.5
ABCD4-202ENST00000460308 CCER1Q8TC90 406 aaPredicted RBP30.63■■■□□ 2.49
ABCD4-202ENST00000460308 NUTM2FA1L443 756 aa30.62■■■□□ 2.49
ABCD4-202ENST00000460308 PHLPP1O60346 1717 aa30.61■■■□□ 2.49
ABCD4-202ENST00000460308 MINK1Q8N4C8 1332 aaPredicted RBP30.59■■■□□ 2.49
ABCD4-202ENST00000460308 NBPF8Q3BBV2 869 aa30.59■■■□□ 2.49
ABCD4-202ENST00000460308 ORAI2Q96SN7 254 aa30.59■■■□□ 2.49
ABCD4-202ENST00000460308 ROCK2O75116 1388 aaKnown RBP30.58■■■□□ 2.49
ABCD4-202ENST00000460308 ESCO1Q5FWF5 840 aa30.58■■■□□ 2.49
ABCD4-202ENST00000460308 HIRIP3Q9BW71 556 aaPredicted RBP30.58■■■□□ 2.49
ABCD4-202ENST00000460308 ARHGEF28Q8N1W1 1705 aaKnown RBP30.57■■■□□ 2.48
ABCD4-202ENST00000460308 TRPM1Q7Z4N2 1603 aa30.57■■■□□ 2.48
ABCD4-202ENST00000460308 AHDC1Q5TGY3 1603 aaPredicted RBP30.55■■■□□ 2.48
ABCD4-202ENST00000460308 FMN2Q9NZ56 1722 aa30.53■■■□□ 2.48
ABCD4-202ENST00000460308 DDX17Q92841 729 aaKnown RBP30.51■■■□□ 2.47
ABCD4-202ENST00000460308 WASLO00401 505 aaPredicted RBP30.5■■■□□ 2.47
ABCD4-202ENST00000460308 TIMELESSQ9UNS1 1208 aa30.5■■■□□ 2.47
ABCD4-202ENST00000460308 CENPJQ9HC77 1338 aaPredicted RBP30.49■■■□□ 2.47
ABCD4-202ENST00000460308 ADGRB2O60241 1585 aa30.49■■■□□ 2.47
ABCD4-202ENST00000460308 COL16A1Q07092 1604 aaPredicted RBP30.48■■■□□ 2.47
ABCD4-202ENST00000460308 JCADQ9P266 1359 aa30.48■■■□□ 2.47
ABCD4-202ENST00000460308 NHSL1Q5SYE7 1610 aa30.47■■■□□ 2.47
ABCD4-202ENST00000460308 EIF3AQ14152 1382 aaKnown RBP30.47■■■□□ 2.47
ABCD4-202ENST00000460308 CARD11Q9BXL7 1154 aa30.47■■■□□ 2.47
ABCD4-202ENST00000460308 LRRC59Q96AG4 307 aaKnown RBP30.46■■■□□ 2.47
ABCD4-202ENST00000460308 NPHP3Q7Z494 1330 aa30.45■■■□□ 2.46
ABCD4-202ENST00000460308 FOXO3O43524 673 aa30.44■■■□□ 2.46
ABCD4-202ENST00000460308 PHF8Q9UPP1 1060 aa30.43■■■□□ 2.46
ABCD4-202ENST00000460308 RGPD8O14715 1765 aaPredicted RBP30.43■■■□□ 2.46
ABCD4-202ENST00000460308 GPRASP1Q5JY77 1395 aa30.42■■■□□ 2.46
ABCD4-202ENST00000460308 DISP3Q9P2K9 1392 aa30.42■■■□□ 2.46
ABCD4-202ENST00000460308 ANKARQ7Z5J8 1434 aa30.42■■■□□ 2.46
ABCD4-202ENST00000460308 CDK19Q9BWU1 502 aa30.42■■■□□ 2.46
ABCD4-202ENST00000460308 RALGAPBQ86X10 1494 aa30.42■■■□□ 2.46
ABCD4-202ENST00000460308 SOS2Q07890 1332 aaPredicted RBP30.4■■■□□ 2.46
ABCD4-202ENST00000460308 KIF1AQ12756 1690 aa30.38■■■□□ 2.45
ABCD4-202ENST00000460308 TULP4Q9NRJ4 1543 aa30.37■■■□□ 2.45
ABCD4-202ENST00000460308 MED1Q15648 1581 aaPredicted RBP30.37■■■□□ 2.45
ABCD4-202ENST00000460308 QRICH2Q9H0J4 1663 aa30.36■■■□□ 2.45
ABCD4-202ENST00000460308 XPCQ01831 940 aaPredicted RBP30.36■■■□□ 2.45
ABCD4-202ENST00000460308 PMFBP1Q8TBY8 1022 aa30.36■■■□□ 2.45
ABCD4-202ENST00000460308 SRPK2P78362 688 aaKnown RBP30.35■■■□□ 2.45
ABCD4-202ENST00000460308 NUDT16Q96DE0 195 aaKnown RBP30.35■■■□□ 2.45
ABCD4-202ENST00000460308 SPATA31A6Q5VVP1 1343 aa30.35■■■□□ 2.45
ABCD4-202ENST00000460308 PRR36Q9H6K5 1346 aa30.35■■■□□ 2.45
ABCD4-202ENST00000460308 USP32Q8NFA0 1604 aa30.34■■■□□ 2.45
ABCD4-202ENST00000460308 PHF23Q9BUL5 403 aaPredicted RBP30.34■■■□□ 2.45
ABCD4-202ENST00000460308 PSME1Q06323 249 aa30.33■■■□□ 2.45
ABCD4-202ENST00000460308 KRT28Q7Z3Y7 464 aa30.33■■■□□ 2.45
ABCD4-202ENST00000460308 SHPRHQ149N8 1683 aa30.32■■■□□ 2.44
ABCD4-202ENST00000460308 EVC2Q86UK5 1308 aa30.3■■■□□ 2.44
ABCD4-202ENST00000460308 NGDNQ8NEJ9 315 aaKnown RBP30.3■■■□□ 2.44
ABCD4-202ENST00000460308 NUTM2BA6NNL0 878 aaPredicted RBP30.29■■■□□ 2.44
ABCD4-202ENST00000460308 NUTM2EB1AL46 878 aaPredicted RBP30.29■■■□□ 2.44
ABCD4-202ENST00000460308 NUTM2AQ8IVF1 878 aaPredicted RBP30.29■■■□□ 2.44
ABCD4-202ENST00000460308 CABP2Q9NPB3 220 aa30.29■■■□□ 2.44
ABCD4-202ENST00000460308 PXDNQ92626 1479 aa30.29■■■□□ 2.44
ABCD4-202ENST00000460308 PNPLA6Q8IY17 1366 aa30.28■■■□□ 2.44
ABCD4-202ENST00000460308 CCDC61Q9Y6R9 512 aa30.28■■■□□ 2.44
ABCD4-202ENST00000460308 MEX3CQ5U5Q3 659 aaKnown RBP30.27■■■□□ 2.44
ABCD4-202ENST00000460308 ATP7BP35670 1465 aa30.26■■■□□ 2.44
ABCD4-202ENST00000460308 ITSN1Q15811 1721 aa30.26■■■□□ 2.43
ABCD4-202ENST00000460308 SPATA31A3Q5VYP0 1347 aa30.22■■■□□ 2.43
ABCD4-202ENST00000460308 LMOD2Q6P5Q4 547 aa30.21■■■□□ 2.43
ABCD4-202ENST00000460308 SBNO2Q9Y2G9 1366 aa30.19■■■□□ 2.42
ABCD4-202ENST00000460308 PLEKHG3A1L390 1219 aa30.19■■■□□ 2.42
ABCD4-202ENST00000460308 SBNO1A3KN83 1393 aa30.18■■■□□ 2.42
ABCD4-202ENST00000460308 ST20-MTHFSA0A0A6YYL1 179 aa30.18■■■□□ 2.42
ABCD4-202ENST00000460308 PPIP5K1Q6PFW1 1433 aa30.17■■■□□ 2.42
ABCD4-202ENST00000460308 LRP6O75581 1613 aa30.17■■■□□ 2.42
ABCD4-202ENST00000460308 ACEP12821 1306 aa30.17■■■□□ 2.42
ABCD4-202ENST00000460308 SLC24A1O60721 1099 aa30.16■■■□□ 2.42
ABCD4-202ENST00000460308 TNS3Q68CZ2 1445 aa30.15■■■□□ 2.42
ABCD4-202ENST00000460308 TOPAZ1Q8N9V7 1692 aa30.15■■■□□ 2.42
ABCD4-202ENST00000460308 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
ABCD4-202ENST00000460308 USP47Q96K76 1375 aa30.15■■■□□ 2.42
ABCD4-202ENST00000460308 CABP1Q9NZU7 370 aa30.14■■■□□ 2.42
ABCD4-202ENST00000460308 ADAMTS2O95450 1211 aa30.13■■■□□ 2.41
ABCD4-202ENST00000460308 COL22A1Q8NFW1 1626 aaPredicted RBP30.12■■■□□ 2.41
ABCD4-202ENST00000460308 POLR3AO14802 1390 aaPredicted RBP30.12■■■□□ 2.41
ABCD4-202ENST00000460308 ARHGEF10O15013 1369 aa30.12■■■□□ 2.41
ABCD4-202ENST00000460308 ATAD2Q6PL18 1390 aa30.11■■■□□ 2.41
ABCD4-202ENST00000460308 PLEKHG5O94827 1062 aa30.1■■■□□ 2.41
ABCD4-202ENST00000460308 HAP1P54257 671 aaPredicted RBP30.1■■■□□ 2.41
ABCD4-202ENST00000460308 C8orf37Q96NL8 207 aa30.09■■■□□ 2.41
ABCD4-202ENST00000460308 TESK2Q96S53 571 aa30.08■■■□□ 2.41
ABCD4-202ENST00000460308 RGS17Q9UGC6 210 aaPredicted RBP30.08■■■□□ 2.41
ABCD4-202ENST00000460308 TRPM3Q9HCF6 1732 aaPredicted RBP30.06■■■□□ 2.4
ABCD4-202ENST00000460308 NGLY1Q96IV0 654 aa30.05■■■□□ 2.4
ABCD4-202ENST00000460308 ZNF772Q68DY9 489 aaPredicted RBP30.04■■■□□ 2.4
ABCD4-202ENST00000460308 CABLES1Q8TDN4 633 aa30.04■■■□□ 2.4
ABCD4-202ENST00000460308 PUS7Q96PZ0 661 aaKnown RBP30.04■■■□□ 2.4
ABCD4-202ENST00000460308 TMF1P82094 1093 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms