RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 NGEFQ8N5V2 710 aa15.89■□□□□ 0.14
TSC22D1-203ENST00000458659 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
TSC22D1-203ENST00000458659 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
TSC22D1-203ENST00000458659 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
TSC22D1-203ENST00000458659 MINK1Q8N4C8 1332 aaPredicted RBP15.88■□□□□ 0.13
TSC22D1-203ENST00000458659 PER1O15534 1290 aaPredicted RBP15.88■□□□□ 0.13
TSC22D1-203ENST00000458659 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
TSC22D1-203ENST00000458659 KIF16BQ96L93 1317 aa15.88■□□□□ 0.13
TSC22D1-203ENST00000458659 NEK4P51957 841 aa15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 PHF14O94880 888 aa15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 CCDC39Q9UFE4 941 aa15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 NECTIN2Q92692 538 aa15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 PDCL3Q9H2J4 239 aa15.87■□□□□ 0.13
TSC22D1-203ENST00000458659 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
TSC22D1-203ENST00000458659 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
TSC22D1-203ENST00000458659 AAMPQ13685 434 aa15.86■□□□□ 0.13
TSC22D1-203ENST00000458659 CCDC27Q2M243 656 aa15.86■□□□□ 0.13
TSC22D1-203ENST00000458659 INTS3Q68E01 1043 aaKnown RBP15.85■□□□□ 0.13
TSC22D1-203ENST00000458659 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
TSC22D1-203ENST00000458659 NUTM2FA1L443 756 aa15.85■□□□□ 0.13
TSC22D1-203ENST00000458659 REC8O95072 547 aa15.85■□□□□ 0.13
TSC22D1-203ENST00000458659 ISY1Q9ULR0 285 aaKnown RBP15.85■□□□□ 0.13
TSC22D1-203ENST00000458659 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 SPC24Q8NBT2 197 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 TERF2IPQ9NYB0 399 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 CAMSAP2Q08AD1 1489 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 TEX14Q8IWB6 1497 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 TRIM27P14373 513 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 MAP7D2Q96T17 732 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
TSC22D1-203ENST00000458659 CBX1P83916 185 aa15.83■□□□□ 0.13
TSC22D1-203ENST00000458659 UGGT2Q9NYU1 1516 aa15.83■□□□□ 0.12
TSC22D1-203ENST00000458659 HMMRO75330 724 aa15.83■□□□□ 0.12
TSC22D1-203ENST00000458659 TROQ12816 1431 aaPredicted RBP15.83■□□□□ 0.12
TSC22D1-203ENST00000458659 PLEKHH2Q8IVE3 1493 aa15.82■□□□□ 0.12
TSC22D1-203ENST00000458659 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
TSC22D1-203ENST00000458659 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
TSC22D1-203ENST00000458659 RTF1Q92541 710 aaKnown RBP15.82■□□□□ 0.12
TSC22D1-203ENST00000458659 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
TSC22D1-203ENST00000458659 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
TSC22D1-203ENST00000458659 RABEP1Q15276 862 aa15.81■□□□□ 0.12
TSC22D1-203ENST00000458659 TESK2Q96S53 571 aa15.81■□□□□ 0.12
TSC22D1-203ENST00000458659 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
TSC22D1-203ENST00000458659 GOLGA6L6A8MZA4 724 aa15.81■□□□□ 0.12
TSC22D1-203ENST00000458659 TSPY26PQ9H489 355 aa15.81■□□□□ 0.12
TSC22D1-203ENST00000458659 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 VPS37CA5D8V6 355 aaPredicted RBP15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 FBXW7Q969H0 707 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 GDPD2Q9HCC8 539 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 RALGAPBQ86X10 1494 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 BAG4O95429 457 aaKnown RBP15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
TSC22D1-203ENST00000458659 FIBPO43427 364 aa15.79■□□□□ 0.12
TSC22D1-203ENST00000458659 IFT57Q9NWB7 429 aa15.79■□□□□ 0.12
TSC22D1-203ENST00000458659 KDM6BO15054 1643 aa15.79■□□□□ 0.12
TSC22D1-203ENST00000458659 ZNF830Q96NB3 372 aaPredicted RBP15.78■□□□□ 0.12
TSC22D1-203ENST00000458659 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
TSC22D1-203ENST00000458659 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.78■□□□□ 0.12
TSC22D1-203ENST00000458659 NPHP1O15259 732 aa15.77■□□□□ 0.12
TSC22D1-203ENST00000458659 SMARCA5O60264 1052 aaPredicted RBP15.77■□□□□ 0.12
TSC22D1-203ENST00000458659 TBC1D9Q6ZT07 1266 aa15.77■□□□□ 0.12
TSC22D1-203ENST00000458659 STK31Q9BXU1 1019 aa15.77■□□□□ 0.12
TSC22D1-203ENST00000458659 FAM177BA6PVY3 158 aa15.77■□□□□ 0.11
TSC22D1-203ENST00000458659 PTPRGP23470 1445 aa15.76■□□□□ 0.11
TSC22D1-203ENST00000458659 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
TSC22D1-203ENST00000458659 API5Q9BZZ5 524 aaKnown RBP15.76■□□□□ 0.11
TSC22D1-203ENST00000458659 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
TSC22D1-203ENST00000458659 GAS2L2Q8NHY3 880 aa15.76■□□□□ 0.11
TSC22D1-203ENST00000458659 GPRASP1Q5JY77 1395 aa15.76■□□□□ 0.11
TSC22D1-203ENST00000458659 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 MLECQ14165 292 aa15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 GCC1Q96CN9 775 aa15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 ZSCAN23Q3MJ62 389 aa15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 MTERF4Q7Z6M4 381 aaKnown RBP15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 PLB1Q6P1J6 1458 aa15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
TSC22D1-203ENST00000458659 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
TSC22D1-203ENST00000458659 MBD3O95983 291 aa15.74■□□□□ 0.11
TSC22D1-203ENST00000458659 GAS2L3Q86XJ1 694 aa15.74■□□□□ 0.11
TSC22D1-203ENST00000458659 TNNT3P45378 269 aaPredicted RBP15.74■□□□□ 0.11
TSC22D1-203ENST00000458659 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
TSC22D1-203ENST00000458659 UPF3BQ9BZI7 483 aaKnown RBP15.74■□□□□ 0.11
TSC22D1-203ENST00000458659 FOSBP53539 338 aa15.73■□□□□ 0.11
TSC22D1-203ENST00000458659 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
TSC22D1-203ENST00000458659 PZPP20742 1482 aa15.73■□□□□ 0.11
TSC22D1-203ENST00000458659 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
TSC22D1-203ENST00000458659 USP25Q9UHP3 1055 aa15.73■□□□□ 0.11
TSC22D1-203ENST00000458659 IGSF3O75054 1194 aa15.73■□□□□ 0.11
TSC22D1-203ENST00000458659 HSP90B1P14625 803 aaKnown RBP15.72■□□□□ 0.11
TSC22D1-203ENST00000458659 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
TSC22D1-203ENST00000458659 MAP4K4O95819 1239 aaPredicted RBP15.72■□□□□ 0.11
TSC22D1-203ENST00000458659 KLHL40Q2TBA0 621 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms