RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 L3MBTL2Q969R5 705 aa26.03■■□□□ 1.76
PDLIM2-215ENST00000456545 NUTM2FA1L443 756 aa26.02■■□□□ 1.76
PDLIM2-215ENST00000456545 PHF23Q9BUL5 403 aaPredicted RBP26.02■■□□□ 1.76
PDLIM2-215ENST00000456545 C1orf167Q5SNV9 1468 aa26.01■■□□□ 1.75
PDLIM2-215ENST00000456545 ESCO1Q5FWF5 840 aa26■■□□□ 1.75
PDLIM2-215ENST00000456545 ORAI2Q96SN7 254 aa26■■□□□ 1.75
PDLIM2-215ENST00000456545 JCADQ9P266 1359 aa25.98■■□□□ 1.75
PDLIM2-215ENST00000456545 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
PDLIM2-215ENST00000456545 ADGRB1O14514 1584 aa25.97■■□□□ 1.75
PDLIM2-215ENST00000456545 MED1Q15648 1581 aaPredicted RBP25.96■■□□□ 1.75
PDLIM2-215ENST00000456545 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-215ENST00000456545 AHDC1Q5TGY3 1603 aaPredicted RBP25.96■■□□□ 1.75
PDLIM2-215ENST00000456545 CDC42BPGQ6DT37 1551 aa25.95■■□□□ 1.75
PDLIM2-215ENST00000456545 DLC1Q96QB1 1528 aa25.95■■□□□ 1.74
PDLIM2-215ENST00000456545 LRRC59Q96AG4 307 aaKnown RBP25.95■■□□□ 1.74
PDLIM2-215ENST00000456545 COL16A1Q07092 1604 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-215ENST00000456545 MINK1Q8N4C8 1332 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-215ENST00000456545 NBPF1Q3BBV0 1214 aa25.92■■□□□ 1.74
PDLIM2-215ENST00000456545 HIRIP3Q9BW71 556 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-215ENST00000456545 KIAA1210Q9ULL0 1709 aa25.9■■□□□ 1.74
PDLIM2-215ENST00000456545 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
PDLIM2-215ENST00000456545 NHSL1Q5SYE7 1610 aa25.88■■□□□ 1.73
PDLIM2-215ENST00000456545 SPATA31A6Q5VVP1 1343 aa25.88■■□□□ 1.73
PDLIM2-215ENST00000456545 FOXO3O43524 673 aa25.87■■□□□ 1.73
PDLIM2-215ENST00000456545 MEX3CQ5U5Q3 659 aaKnown RBP25.87■■□□□ 1.73
PDLIM2-215ENST00000456545 NPHP3Q7Z494 1330 aa25.87■■□□□ 1.73
PDLIM2-215ENST00000456545 NUTM2BA6NNL0 878 aaPredicted RBP25.86■■□□□ 1.73
PDLIM2-215ENST00000456545 NUTM2EB1AL46 878 aaPredicted RBP25.86■■□□□ 1.73
PDLIM2-215ENST00000456545 NUTM2AQ8IVF1 878 aaPredicted RBP25.86■■□□□ 1.73
PDLIM2-215ENST00000456545 FMN2Q9NZ56 1722 aa25.85■■□□□ 1.73
PDLIM2-215ENST00000456545 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
PDLIM2-215ENST00000456545 SOS2Q07890 1332 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-215ENST00000456545 WASLO00401 505 aaPredicted RBP25.82■■□□□ 1.72
PDLIM2-215ENST00000456545 XPCQ01831 940 aaPredicted RBP25.82■■□□□ 1.72
PDLIM2-215ENST00000456545 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-215ENST00000456545 ARHGEF28Q8N1W1 1705 aaKnown RBP25.8■■□□□ 1.72
PDLIM2-215ENST00000456545 ILDR2Q71H61 639 aa25.8■■□□□ 1.72
PDLIM2-215ENST00000456545 SHPRHQ149N8 1683 aa25.8■■□□□ 1.72
PDLIM2-215ENST00000456545 ROCK2O75116 1388 aaKnown RBP25.8■■□□□ 1.72
PDLIM2-215ENST00000456545 RGPD8O14715 1765 aaPredicted RBP25.78■■□□□ 1.72
PDLIM2-215ENST00000456545 PSME1Q06323 249 aa25.77■■□□□ 1.72
PDLIM2-215ENST00000456545 KRT28Q7Z3Y7 464 aa25.77■■□□□ 1.72
PDLIM2-215ENST00000456545 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
PDLIM2-215ENST00000456545 CENPJQ9HC77 1338 aaPredicted RBP25.77■■□□□ 1.72
PDLIM2-215ENST00000456545 ADGRB2O60241 1585 aa25.77■■□□□ 1.72
PDLIM2-215ENST00000456545 NBPF8Q3BBV2 869 aa25.76■■□□□ 1.71
PDLIM2-215ENST00000456545 CDK19Q9BWU1 502 aa25.76■■□□□ 1.71
PDLIM2-215ENST00000456545 ANKARQ7Z5J8 1434 aa25.76■■□□□ 1.71
PDLIM2-215ENST00000456545 KIF1AQ12756 1690 aa25.75■■□□□ 1.71
PDLIM2-215ENST00000456545 PNPLA6Q8IY17 1366 aa25.75■■□□□ 1.71
PDLIM2-215ENST00000456545 TRPM1Q7Z4N2 1603 aa25.74■■□□□ 1.71
PDLIM2-215ENST00000456545 NUDT16Q96DE0 195 aaKnown RBP25.72■■□□□ 1.71
PDLIM2-215ENST00000456545 NGDNQ8NEJ9 315 aaKnown RBP25.71■■□□□ 1.71
PDLIM2-215ENST00000456545 CARD11Q9BXL7 1154 aa25.71■■□□□ 1.71
PDLIM2-215ENST00000456545 TULP4Q9NRJ4 1543 aa25.7■■□□□ 1.7
PDLIM2-215ENST00000456545 SRPK2P78362 688 aaKnown RBP25.7■■□□□ 1.7
PDLIM2-215ENST00000456545 LMOD2Q6P5Q4 547 aa25.7■■□□□ 1.7
PDLIM2-215ENST00000456545 PRR36Q9H6K5 1346 aa25.69■■□□□ 1.7
PDLIM2-215ENST00000456545 PXDNQ92626 1479 aa25.69■■□□□ 1.7
PDLIM2-215ENST00000456545 ADAMTS2O95450 1211 aa25.69■■□□□ 1.7
PDLIM2-215ENST00000456545 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
PDLIM2-215ENST00000456545 RGS17Q9UGC6 210 aaPredicted RBP25.69■■□□□ 1.7
PDLIM2-215ENST00000456545 LRP6O75581 1613 aa25.69■■□□□ 1.7
PDLIM2-215ENST00000456545 GPRASP1Q5JY77 1395 aa25.68■■□□□ 1.7
PDLIM2-215ENST00000456545 USP32Q8NFA0 1604 aa25.67■■□□□ 1.7
PDLIM2-215ENST00000456545 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
PDLIM2-215ENST00000456545 ZNF772Q68DY9 489 aaPredicted RBP25.66■■□□□ 1.7
PDLIM2-215ENST00000456545 C8orf37Q96NL8 207 aa25.66■■□□□ 1.7
PDLIM2-215ENST00000456545 SPATA31A3Q5VYP0 1347 aa25.65■■□□□ 1.7
PDLIM2-215ENST00000456545 HAP1P54257 671 aaPredicted RBP25.65■■□□□ 1.7
PDLIM2-215ENST00000456545 CCDC61Q9Y6R9 512 aa25.65■■□□□ 1.7
PDLIM2-215ENST00000456545 PLEKHG5O94827 1062 aa25.64■■□□□ 1.7
PDLIM2-215ENST00000456545 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
PDLIM2-215ENST00000456545 CABP2Q9NPB3 220 aa25.63■■□□□ 1.69
PDLIM2-215ENST00000456545 QRICH2Q9H0J4 1663 aa25.63■■□□□ 1.69
PDLIM2-215ENST00000456545 EVC2Q86UK5 1308 aa25.63■■□□□ 1.69
PDLIM2-215ENST00000456545 PAK3O75914 559 aaPredicted RBP25.62■■□□□ 1.69
PDLIM2-215ENST00000456545 POTEAQ6S8J7 498 aa25.62■■□□□ 1.69
PDLIM2-215ENST00000456545 ITSN1Q15811 1721 aa25.6■■□□□ 1.69
PDLIM2-215ENST00000456545 SBNO1A3KN83 1393 aa25.6■■□□□ 1.69
PDLIM2-215ENST00000456545 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
PDLIM2-215ENST00000456545 AFF2P51816 1311 aa25.6■■□□□ 1.69
PDLIM2-215ENST00000456545 ATP7BP35670 1465 aa25.59■■□□□ 1.69
PDLIM2-215ENST00000456545 RALGAPBQ86X10 1494 aa25.59■■□□□ 1.69
PDLIM2-215ENST00000456545 TNS3Q68CZ2 1445 aa25.58■■□□□ 1.69
PDLIM2-215ENST00000456545 COL22A1Q8NFW1 1626 aaPredicted RBP25.57■■□□□ 1.68
PDLIM2-215ENST00000456545 SOCS7O14512 581 aa25.57■■□□□ 1.68
PDLIM2-215ENST00000456545 ARHGEF10O15013 1369 aa25.56■■□□□ 1.68
PDLIM2-215ENST00000456545 ACEP12821 1306 aa25.56■■□□□ 1.68
PDLIM2-215ENST00000456545 PLEKHG3A1L390 1219 aa25.55■■□□□ 1.68
PDLIM2-215ENST00000456545 CABLES1Q8TDN4 633 aa25.54■■□□□ 1.68
PDLIM2-215ENST00000456545 PPIP5K1Q6PFW1 1433 aa25.53■■□□□ 1.68
PDLIM2-215ENST00000456545 CABP1Q9NZU7 370 aa25.52■■□□□ 1.68
PDLIM2-215ENST00000456545 USP21Q9UK80 565 aa25.52■■□□□ 1.68
PDLIM2-215ENST00000456545 QTRT2Q9H974 415 aaKnown RBP25.51■■□□□ 1.67
PDLIM2-215ENST00000456545 RXRBP28702 533 aa25.5■■□□□ 1.67
PDLIM2-215ENST00000456545 POLR3AO14802 1390 aaPredicted RBP25.48■■□□□ 1.67
PDLIM2-215ENST00000456545 TOPAZ1Q8N9V7 1692 aa25.47■■□□□ 1.67
PDLIM2-215ENST00000456545 FNBP4Q8N3X1 1017 aaPredicted RBP25.46■■□□□ 1.67
PDLIM2-215ENST00000456545 TRPM3Q9HCF6 1732 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms