RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 AHDC1Q5TGY3 1603 aaPredicted RBP25.56■■□□□ 1.68
COPS7A-202ENST00000455113 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
COPS7A-202ENST00000455113 PRAM1Q96QH2 718 aa25.55■■□□□ 1.68
COPS7A-202ENST00000455113 SIN3AQ96ST3 1273 aa25.55■■□□□ 1.68
COPS7A-202ENST00000455113 TRAK1Q9UPV9 953 aa25.55■■□□□ 1.68
COPS7A-202ENST00000455113 JCADQ9P266 1359 aa25.55■■□□□ 1.68
COPS7A-202ENST00000455113 PLEKHH1Q9ULM0 1364 aa25.55■■□□□ 1.68
COPS7A-202ENST00000455113 ADGRB1O14514 1584 aa25.54■■□□□ 1.68
COPS7A-202ENST00000455113 DLC1Q96QB1 1528 aa25.53■■□□□ 1.68
COPS7A-202ENST00000455113 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
COPS7A-202ENST00000455113 SAFB2Q14151 953 aaKnown RBP eCLIP25.52■■□□□ 1.68
COPS7A-202ENST00000455113 ESCO1Q5FWF5 840 aa25.51■■□□□ 1.67
COPS7A-202ENST00000455113 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
COPS7A-202ENST00000455113 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
COPS7A-202ENST00000455113 NUTM2FA1L443 756 aa25.49■■□□□ 1.67
COPS7A-202ENST00000455113 LRRC59Q96AG4 307 aaKnown RBP25.49■■□□□ 1.67
COPS7A-202ENST00000455113 NHSL1Q5SYE7 1610 aa25.48■■□□□ 1.67
COPS7A-202ENST00000455113 KIAA1210Q9ULL0 1709 aa25.48■■□□□ 1.67
COPS7A-202ENST00000455113 SPATA31A6Q5VVP1 1343 aa25.45■■□□□ 1.66
COPS7A-202ENST00000455113 DDX17Q92841 729 aaKnown RBP25.44■■□□□ 1.66
COPS7A-202ENST00000455113 FMN2Q9NZ56 1722 aa25.43■■□□□ 1.66
COPS7A-202ENST00000455113 NPHP3Q7Z494 1330 aa25.43■■□□□ 1.66
COPS7A-202ENST00000455113 SHPRHQ149N8 1683 aa25.41■■□□□ 1.66
COPS7A-202ENST00000455113 MINK1Q8N4C8 1332 aaPredicted RBP25.41■■□□□ 1.66
COPS7A-202ENST00000455113 HIRIP3Q9BW71 556 aaPredicted RBP25.4■■□□□ 1.66
COPS7A-202ENST00000455113 TONSLQ96HA7 1378 aa25.39■■□□□ 1.66
COPS7A-202ENST00000455113 NBPF1Q3BBV0 1214 aa25.39■■□□□ 1.65
COPS7A-202ENST00000455113 MEX3CQ5U5Q3 659 aaKnown RBP25.39■■□□□ 1.65
COPS7A-202ENST00000455113 ARHGEF28Q8N1W1 1705 aaKnown RBP25.39■■□□□ 1.65
COPS7A-202ENST00000455113 CLSPNQ9HAW4 1339 aa25.38■■□□□ 1.65
COPS7A-202ENST00000455113 FOXO3O43524 673 aa25.38■■□□□ 1.65
COPS7A-202ENST00000455113 EIF3AQ14152 1382 aaKnown RBP25.38■■□□□ 1.65
COPS7A-202ENST00000455113 SOS2Q07890 1332 aaPredicted RBP25.38■■□□□ 1.65
COPS7A-202ENST00000455113 ADGRB2O60241 1585 aa25.37■■□□□ 1.65
COPS7A-202ENST00000455113 ILDR2Q71H61 639 aa25.35■■□□□ 1.65
COPS7A-202ENST00000455113 KIF1AQ12756 1690 aa25.35■■□□□ 1.65
COPS7A-202ENST00000455113 NUTM2BA6NNL0 878 aaPredicted RBP25.34■■□□□ 1.65
COPS7A-202ENST00000455113 NUTM2EB1AL46 878 aaPredicted RBP25.34■■□□□ 1.65
COPS7A-202ENST00000455113 NUTM2AQ8IVF1 878 aaPredicted RBP25.34■■□□□ 1.65
COPS7A-202ENST00000455113 WASLO00401 505 aaPredicted RBP25.34■■□□□ 1.65
COPS7A-202ENST00000455113 PHF8Q9UPP1 1060 aa25.34■■□□□ 1.65
COPS7A-202ENST00000455113 RGPD8O14715 1765 aaPredicted RBP25.33■■□□□ 1.65
COPS7A-202ENST00000455113 ANKARQ7Z5J8 1434 aa25.33■■□□□ 1.65
COPS7A-202ENST00000455113 ROCK2O75116 1388 aaKnown RBP25.32■■□□□ 1.64
COPS7A-202ENST00000455113 PNPLA6Q8IY17 1366 aa25.31■■□□□ 1.64
COPS7A-202ENST00000455113 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
COPS7A-202ENST00000455113 TRPM1Q7Z4N2 1603 aa25.3■■□□□ 1.64
COPS7A-202ENST00000455113 PSME1Q06323 249 aa25.29■■□□□ 1.64
COPS7A-202ENST00000455113 CENPJQ9HC77 1338 aaPredicted RBP25.28■■□□□ 1.64
COPS7A-202ENST00000455113 TULP4Q9NRJ4 1543 aa25.28■■□□□ 1.64
COPS7A-202ENST00000455113 LRP6O75581 1613 aa25.27■■□□□ 1.64
COPS7A-202ENST00000455113 PXDNQ92626 1479 aa25.27■■□□□ 1.64
COPS7A-202ENST00000455113 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
COPS7A-202ENST00000455113 PMFBP1Q8TBY8 1022 aa25.26■■□□□ 1.63
COPS7A-202ENST00000455113 CDK19Q9BWU1 502 aa25.24■■□□□ 1.63
COPS7A-202ENST00000455113 RGS17Q9UGC6 210 aaPredicted RBP25.24■■□□□ 1.63
COPS7A-202ENST00000455113 USP32Q8NFA0 1604 aa25.24■■□□□ 1.63
COPS7A-202ENST00000455113 NBPF8Q3BBV2 869 aa25.23■■□□□ 1.63
COPS7A-202ENST00000455113 ZNF772Q68DY9 489 aaPredicted RBP25.23■■□□□ 1.63
COPS7A-202ENST00000455113 NGDNQ8NEJ9 315 aaKnown RBP25.21■■□□□ 1.63
COPS7A-202ENST00000455113 NUDT16Q96DE0 195 aaKnown RBP25.21■■□□□ 1.63
COPS7A-202ENST00000455113 GPRASP1Q5JY77 1395 aa25.21■■□□□ 1.63
COPS7A-202ENST00000455113 ITSN1Q15811 1721 aa25.21■■□□□ 1.63
COPS7A-202ENST00000455113 PRR36Q9H6K5 1346 aa25.21■■□□□ 1.63
COPS7A-202ENST00000455113 SPATA31A3Q5VYP0 1347 aa25.2■■□□□ 1.62
COPS7A-202ENST00000455113 SRPK2P78362 688 aaKnown RBP25.2■■□□□ 1.62
COPS7A-202ENST00000455113 ADAMTS2O95450 1211 aa25.19■■□□□ 1.62
COPS7A-202ENST00000455113 C8orf37Q96NL8 207 aa25.19■■□□□ 1.62
COPS7A-202ENST00000455113 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
COPS7A-202ENST00000455113 QRICH2Q9H0J4 1663 aa25.19■■□□□ 1.62
COPS7A-202ENST00000455113 LMOD2Q6P5Q4 547 aa25.18■■□□□ 1.62
COPS7A-202ENST00000455113 COL22A1Q8NFW1 1626 aaPredicted RBP25.18■■□□□ 1.62
COPS7A-202ENST00000455113 CCDC61Q9Y6R9 512 aa25.17■■□□□ 1.62
COPS7A-202ENST00000455113 ATP7BP35670 1465 aa25.16■■□□□ 1.62
COPS7A-202ENST00000455113 SBNO1A3KN83 1393 aa25.16■■□□□ 1.62
COPS7A-202ENST00000455113 SOCS7O14512 581 aa25.16■■□□□ 1.62
COPS7A-202ENST00000455113 HAP1P54257 671 aaPredicted RBP25.16■■□□□ 1.62
COPS7A-202ENST00000455113 TNS3Q68CZ2 1445 aa25.16■■□□□ 1.62
COPS7A-202ENST00000455113 POTEAQ6S8J7 498 aa25.15■■□□□ 1.62
COPS7A-202ENST00000455113 NGLY1Q96IV0 654 aa25.15■■□□□ 1.62
COPS7A-202ENST00000455113 AFF2P51816 1311 aa25.14■■□□□ 1.62
COPS7A-202ENST00000455113 ARHGEF10O15013 1369 aa25.14■■□□□ 1.61
COPS7A-202ENST00000455113 ZEB1P37275 1124 aaPredicted RBP25.14■■□□□ 1.61
COPS7A-202ENST00000455113 EVC2Q86UK5 1308 aa25.14■■□□□ 1.61
COPS7A-202ENST00000455113 RALGAPBQ86X10 1494 aa25.13■■□□□ 1.61
COPS7A-202ENST00000455113 PAK3O75914 559 aaPredicted RBP25.11■■□□□ 1.61
COPS7A-202ENST00000455113 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
COPS7A-202ENST00000455113 TIMELESSQ9UNS1 1208 aa25.11■■□□□ 1.61
COPS7A-202ENST00000455113 PLEKHG5O94827 1062 aa25.08■■□□□ 1.61
COPS7A-202ENST00000455113 PLEKHG3A1L390 1219 aa25.07■■□□□ 1.6
COPS7A-202ENST00000455113 ACEP12821 1306 aa25.07■■□□□ 1.6
COPS7A-202ENST00000455113 TOPAZ1Q8N9V7 1692 aa25.07■■□□□ 1.6
COPS7A-202ENST00000455113 PPIP5K1Q6PFW1 1433 aa25.06■■□□□ 1.6
COPS7A-202ENST00000455113 RXRBP28702 533 aa25.05■■□□□ 1.6
COPS7A-202ENST00000455113 USP21Q9UK80 565 aa25.05■■□□□ 1.6
COPS7A-202ENST00000455113 TRPM3Q9HCF6 1732 aaPredicted RBP25.05■■□□□ 1.6
COPS7A-202ENST00000455113 MARF1Q9Y4F3 1742 aaKnown RBP25.05■■□□□ 1.6
COPS7A-202ENST00000455113 POLR3AO14802 1390 aaPredicted RBP25.04■■□□□ 1.6
COPS7A-202ENST00000455113 QTRT2Q9H974 415 aaKnown RBP25.03■■□□□ 1.6
COPS7A-202ENST00000455113 CABLES1Q8TDN4 633 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms