RNA–Protein interactions for RNA: ENST00000454664.2

CNKSR3-203, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 776 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-203ENST00000454664 SEMA3EO15041 775 aa7.49□□□□□ -1.21
CNKSR3-203ENST00000454664 ZMYND10O75800 440 aa7.49□□□□□ -1.21
CNKSR3-203ENST00000454664 TTC24A2A3L6 582 aaPredicted RBP7.47□□□□□ -1.21
CNKSR3-203ENST00000454664 SMYD5Q6GMV2 418 aa7.47□□□□□ -1.21
CNKSR3-203ENST00000454664 HRCP23327 699 aa7.46□□□□□ -1.22
CNKSR3-203ENST00000454664 PUS10Q3MIT2 529 aaKnown RBP7.46□□□□□ -1.22
CNKSR3-203ENST00000454664 SENP2Q9HC62 589 aa7.46□□□□□ -1.22
CNKSR3-203ENST00000454664 FCF1Q9Y324 198 aaKnown RBP7.46□□□□□ -1.22
CNKSR3-203ENST00000454664 TERTO14746 1132 aaKnown RBP7.45□□□□□ -1.22
CNKSR3-203ENST00000454664 MLLT3P42568 568 aaPredicted RBP7.45□□□□□ -1.22
CNKSR3-203ENST00000454664 FAM181BA6NEQ2 426 aa7.44□□□□□ -1.22
CNKSR3-203ENST00000454664 OATP04181 439 aa7.44□□□□□ -1.22
CNKSR3-203ENST00000454664 BARGINQ6ZT62 677 aa7.44□□□□□ -1.22
CNKSR3-203ENST00000454664 ATP13A2Q9NQ11 1180 aa7.44□□□□□ -1.22
CNKSR3-203ENST00000454664 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
CNKSR3-203ENST00000454664 FAM161AQ3B820 660 aa7.43□□□□□ -1.22
CNKSR3-203ENST00000454664 IL27Q8NEV9 243 aa7.43□□□□□ -1.22
CNKSR3-203ENST00000454664 AK7Q96M32 723 aa7.43□□□□□ -1.22
CNKSR3-203ENST00000454664 ARID3AQ99856 593 aa7.43□□□□□ -1.22
CNKSR3-203ENST00000454664 NUTM2FA1L443 756 aa7.42□□□□□ -1.22
CNKSR3-203ENST00000454664 FCHSD2O94868 740 aa7.42□□□□□ -1.22
CNKSR3-203ENST00000454664 FMNL1O95466 1100 aaPredicted RBP7.42□□□□□ -1.22
CNKSR3-203ENST00000454664 TRIM47Q96LD4 638 aa7.42□□□□□ -1.22
CNKSR3-203ENST00000454664 MORN1Q5T089 497 aa7.41□□□□□ -1.22
CNKSR3-203ENST00000454664 SNIP1Q8TAD8 396 aaKnown RBP7.41□□□□□ -1.22
CNKSR3-203ENST00000454664 PXYLP1Q8TE99 480 aa7.41□□□□□ -1.22
CNKSR3-203ENST00000454664 KIFC2Q96AC6 838 aa7.41□□□□□ -1.22
CNKSR3-203ENST00000454664 THAP11Q96EK4 314 aa7.41□□□□□ -1.22
CNKSR3-203ENST00000454664 GPBP1L1Q9HC44 474 aaPredicted RBP7.41□□□□□ -1.22
CNKSR3-203ENST00000454664 WNT7AO00755 349 aa7.4□□□□□ -1.22
CNKSR3-203ENST00000454664 SNRPBP14678 240 aaKnown RBP7.4□□□□□ -1.22
CNKSR3-203ENST00000454664 SMPD1P17405 629 aa7.39□□□□□ -1.23
CNKSR3-203ENST00000454664 FAM160A2Q8N612 972 aaPredicted RBP7.39□□□□□ -1.23
CNKSR3-203ENST00000454664 SALL2Q9Y467 1007 aaPredicted RBP7.39□□□□□ -1.23
CNKSR3-203ENST00000454664 ATP6V1AP38606 617 aa7.38□□□□□ -1.23
CNKSR3-203ENST00000454664 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
CNKSR3-203ENST00000454664 KRI1Q8N9T8 703 aaKnown RBP7.38□□□□□ -1.23
CNKSR3-203ENST00000454664 SLC16A10Q8TF71 515 aa7.38□□□□□ -1.23
CNKSR3-203ENST00000454664 MSS51Q4VC12 460 aa7.37□□□□□ -1.23
CNKSR3-203ENST00000454664 RDH13Q8NBN7 331 aa7.37□□□□□ -1.23
CNKSR3-203ENST00000454664 KDM4CQ9H3R0 1056 aa7.37□□□□□ -1.23
CNKSR3-203ENST00000454664 FUT2Q10981 343 aa7.36□□□□□ -1.23
CNKSR3-203ENST00000454664 METTL3Q86U44 580 aaKnown RBP7.36□□□□□ -1.23
CNKSR3-203ENST00000454664 REPIN1Q9BWE0 567 aaKnown RBP7.36□□□□□ -1.23
CNKSR3-203ENST00000454664 SLC27A5Q9Y2P5 690 aa7.36□□□□□ -1.23
CNKSR3-203ENST00000454664 BRICD5Q6PL45 260 aa7.35□□□□□ -1.23
CNKSR3-203ENST00000454664 C1orf115Q9H7X2 142 aa7.35□□□□□ -1.23
CNKSR3-203ENST00000454664 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
CNKSR3-203ENST00000454664 TRIM32Q13049 653 aa7.34□□□□□ -1.23
CNKSR3-203ENST00000454664 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
CNKSR3-203ENST00000454664 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
CNKSR3-203ENST00000454664 ZBTB7CA1YPR0 619 aa7.33□□□□□ -1.24
CNKSR3-203ENST00000454664 J3QL48 77 aa7.33□□□□□ -1.24
CNKSR3-203ENST00000454664 PDIA4P13667 645 aaKnown RBP7.33□□□□□ -1.24
CNKSR3-203ENST00000454664 ZSCAN1Q8NBB4 408 aa7.33□□□□□ -1.24
CNKSR3-203ENST00000454664 MRGPRX2Q96LB1 330 aa7.33□□□□□ -1.24
CNKSR3-203ENST00000454664 APBB1O00213 710 aa7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 FECHP22830 423 aa7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 GCGRP47871 477 aa7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 HIC1Q14526 733 aa7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 GPIHBP1Q8IV16 184 aa7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
CNKSR3-203ENST00000454664 ARID3CA6NKF2 412 aa7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 DDX11L8A8MPP1 907 aa7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 PDE4DQ08499 809 aa7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 SULF1Q8IWU6 871 aa7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 NPAS3Q8IXF0 933 aa7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 HPS1Q92902 700 aa7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 NXF1Q9UBU9 619 aaKnown RBP7.31□□□□□ -1.24
CNKSR3-203ENST00000454664 TRIM66O15016 1216 aa7.3□□□□□ -1.24
CNKSR3-203ENST00000454664 RBM26Q5T8P6 1007 aaKnown RBP7.3□□□□□ -1.24
CNKSR3-203ENST00000454664 IRF7Q92985 503 aa7.3□□□□□ -1.24
CNKSR3-203ENST00000454664 GMPRP36959 345 aa7.29□□□□□ -1.24
CNKSR3-203ENST00000454664 MMP16P51512 607 aa7.29□□□□□ -1.24
CNKSR3-203ENST00000454664 Q3C1V9 767 aa7.29□□□□□ -1.24
CNKSR3-203ENST00000454664 RNF19BQ6ZMZ0 732 aa7.29□□□□□ -1.24
CNKSR3-203ENST00000454664 WNT7BP56706 349 aa7.27□□□□□ -1.25
CNKSR3-203ENST00000454664 FLIIQ13045 1269 aa7.27□□□□□ -1.25
CNKSR3-203ENST00000454664 RC3H1Q5TC82 1133 aaKnown RBP7.26□□□□□ -1.25
CNKSR3-203ENST00000454664 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
CNKSR3-203ENST00000454664 FAM117AQ9C073 453 aa7.25□□□□□ -1.25
CNKSR3-203ENST00000454664 GNPATO15228 680 aa7.24□□□□□ -1.25
CNKSR3-203ENST00000454664 DXOO77932 396 aaKnown RBP7.24□□□□□ -1.25
CNKSR3-203ENST00000454664 H3BM21 787 aa7.23□□□□□ -1.25
CNKSR3-203ENST00000454664 ALDH1A1P00352 501 aa7.23□□□□□ -1.25
CNKSR3-203ENST00000454664 USB1Q9BQ65 265 aaKnown RBP7.23□□□□□ -1.25
CNKSR3-203ENST00000454664 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
CNKSR3-203ENST00000454664 SKOR1P84550 965 aa7.21□□□□□ -1.26
CNKSR3-203ENST00000454664 CCDC24Q8N4L8 307 aa7.21□□□□□ -1.26
CNKSR3-203ENST00000454664 CAPN5O15484 640 aaPredicted RBP7.2□□□□□ -1.26
CNKSR3-203ENST00000454664 SUZ12Q15022 739 aaKnown RBP7.2□□□□□ -1.26
CNKSR3-203ENST00000454664 PLEKHG3A1L390 1219 aa7.19□□□□□ -1.26
CNKSR3-203ENST00000454664 TRIM46Q7Z4K8 759 aa7.19□□□□□ -1.26
CNKSR3-203ENST00000454664 CCDC82Q8N4S0 544 aa7.19□□□□□ -1.26
CNKSR3-203ENST00000454664 NLRP7Q8WX94 980 aa7.19□□□□□ -1.26
CNKSR3-203ENST00000454664 A6NJR5 290 aa7.18□□□□□ -1.26
CNKSR3-203ENST00000454664 BMP1P13497 986 aa7.18□□□□□ -1.26
CNKSR3-203ENST00000454664 VEGFBP49765 207 aa7.18□□□□□ -1.26
CNKSR3-203ENST00000454664 WASF2Q9Y6W5 498 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms