RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-208	ENST00000453560	LRP6	O75581	1613 aa		28.41	■■■□□ 2.14
RAP1B-208	ENST00000453560	WAPL	Q7Z5K2	1190 aa		28.41	■■■□□ 2.14
RAP1B-208	ENST00000453560	ADGRB1	O14514	1584 aa		28.4	■■■□□ 2.14
RAP1B-208	ENST00000453560	DHX57	Q6P158	1386 aa	Known RBP	28.38	■■■□□ 2.13
RAP1B-208	ENST00000453560	FMN2	Q9NZ56	1722 aa		28.38	■■■□□ 2.13
RAP1B-208	ENST00000453560	DDX17	Q92841	729 aa	Known RBP	28.37	■■■□□ 2.13
RAP1B-208	ENST00000453560	SIRT1	Q96EB6	747 aa		28.37	■■■□□ 2.13
RAP1B-208	ENST00000453560	DCAF11	Q8TEB1	546 aa		28.36	■■■□□ 2.13
RAP1B-208	ENST00000453560	ORAI2	Q96SN7	254 aa		28.36	■■■□□ 2.13
RAP1B-208	ENST00000453560	DLC1	Q96QB1	1528 aa		28.35	■■■□□ 2.13
RAP1B-208	ENST00000453560	STAC3	Q96MF2	364 aa		28.35	■■■□□ 2.13
RAP1B-208	ENST00000453560	LRRC59	Q96AG4	307 aa	Known RBP	28.33	■■■□□ 2.13
RAP1B-208	ENST00000453560	KDM2A	Q9Y2K7	1162 aa		28.32	■■■□□ 2.12
RAP1B-208	ENST00000453560	SOS2	Q07890	1332 aa	Predicted RBP	28.3	■■■□□ 2.12
RAP1B-208	ENST00000453560	PNPLA6	Q8IY17	1366 aa		28.29	■■■□□ 2.12
RAP1B-208	ENST00000453560	POTEA	Q6S8J7	498 aa		28.27	■■■□□ 2.12
RAP1B-208	ENST00000453560	RGPD8	O14715	1765 aa	Predicted RBP	28.27	■■■□□ 2.12
RAP1B-208	ENST00000453560	ADGRB2	O60241	1585 aa		28.26	■■■□□ 2.11
RAP1B-208	ENST00000453560	ESCO1	Q5FWF5	840 aa		28.26	■■■□□ 2.11
RAP1B-208	ENST00000453560	PRAM1	Q96QH2	718 aa		28.26	■■■□□ 2.11
RAP1B-208	ENST00000453560	KIF1A	Q12756	1690 aa		28.26	■■■□□ 2.11
RAP1B-208	ENST00000453560	PXDN	Q92626	1479 aa		28.25	■■■□□ 2.11
RAP1B-208	ENST00000453560	KIAA1210	Q9ULL0	1709 aa		28.24	■■■□□ 2.11
RAP1B-208	ENST00000453560	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.23	■■■□□ 2.11
RAP1B-208	ENST00000453560	MEX3C	Q5U5Q3	659 aa	Known RBP	28.23	■■■□□ 2.11
RAP1B-208	ENST00000453560	NPHP3	Q7Z494	1330 aa		28.22	■■■□□ 2.11
RAP1B-208	ENST00000453560	NUTM2F	A1L443	756 aa		28.22	■■■□□ 2.11
RAP1B-208	ENST00000453560	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.22	■■■□□ 2.11
RAP1B-208	ENST00000453560	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.21	■■■□□ 2.11
RAP1B-208	ENST00000453560	NUTM2E	B1AL46	878 aa	Predicted RBP	28.21	■■■□□ 2.11
RAP1B-208	ENST00000453560	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.21	■■■□□ 2.11
RAP1B-208	ENST00000453560	USP32	Q8NFA0	1604 aa		28.19	■■■□□ 2.1
RAP1B-208	ENST00000453560	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
RAP1B-208	ENST00000453560	TRAK1	Q9UPV9	953 aa		28.19	■■■□□ 2.1
RAP1B-208	ENST00000453560	POGK	Q9P215	609 aa		28.18	■■■□□ 2.1
RAP1B-208	ENST00000453560	FOXO3	O43524	673 aa		28.17	■■■□□ 2.1
RAP1B-208	ENST00000453560	ZNF772	Q68DY9	489 aa	Predicted RBP	28.14	■■■□□ 2.1
RAP1B-208	ENST00000453560	ANKAR	Q7Z5J8	1434 aa		28.13	■■■□□ 2.09
RAP1B-208	ENST00000453560	XPC	Q01831	940 aa	Predicted RBP	28.11	■■■□□ 2.09
RAP1B-208	ENST00000453560	AFF2	P51816	1311 aa		28.09	■■■□□ 2.09
RAP1B-208	ENST00000453560	MARF1	Q9Y4F3	1742 aa	Known RBP	28.09	■■■□□ 2.09
RAP1B-208	ENST00000453560	TULP4	Q9NRJ4	1543 aa		28.08	■■■□□ 2.09
RAP1B-208	ENST00000453560	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.08	■■■□□ 2.09
RAP1B-208	ENST00000453560	PHF8	Q9UPP1	1060 aa		28.08	■■■□□ 2.09
RAP1B-208	ENST00000453560	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.08	■■■□□ 2.09
RAP1B-208	ENST00000453560	C8orf37	Q96NL8	207 aa		28.06	■■■□□ 2.08
RAP1B-208	ENST00000453560	EIF3A	Q14152	1382 aa	Known RBP	28.05	■■■□□ 2.08
RAP1B-208	ENST00000453560	SIN3A	Q96ST3	1273 aa		28.05	■■■□□ 2.08
RAP1B-208	ENST00000453560	SPATA31A3	Q5VYP0	1347 aa		28.04	■■■□□ 2.08
RAP1B-208	ENST00000453560	ADAMTS2	O95450	1211 aa		28.04	■■■□□ 2.08
RAP1B-208	ENST00000453560	WASL	O00401	505 aa	Predicted RBP	28.03	■■■□□ 2.08
RAP1B-208	ENST00000453560	KRT28	Q7Z3Y7	464 aa		28.03	■■■□□ 2.08
RAP1B-208	ENST00000453560	L3MBTL2	Q969R5	705 aa		28.03	■■■□□ 2.08
RAP1B-208	ENST00000453560	PRR36	Q9H6K5	1346 aa		28.02	■■■□□ 2.08
RAP1B-208	ENST00000453560	ITSN1	Q15811	1721 aa		28.02	■■■□□ 2.08
RAP1B-208	ENST00000453560	NBPF1	Q3BBV0	1214 aa		28.02	■■■□□ 2.08
RAP1B-208	ENST00000453560	TNS3	Q68CZ2	1445 aa		28.01	■■■□□ 2.07
RAP1B-208	ENST00000453560	TRPM1	Q7Z4N2	1603 aa		28	■■■□□ 2.07
RAP1B-208	ENST00000453560	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28	■■■□□ 2.07
RAP1B-208	ENST00000453560	ATP7B	P35670	1465 aa		27.98	■■■□□ 2.07
RAP1B-208	ENST00000453560	TRIM26	Q12899	539 aa	Predicted RBP	27.98	■■■□□ 2.07
RAP1B-208	ENST00000453560	NGLY1	Q96IV0	654 aa		27.98	■■■□□ 2.07
RAP1B-208	ENST00000453560	SBNO1	A3KN83	1393 aa		27.98	■■■□□ 2.07
RAP1B-208	ENST00000453560	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.97	■■■□□ 2.07
RAP1B-208	ENST00000453560	PSME1	Q06323	249 aa		27.97	■■■□□ 2.07
RAP1B-208	ENST00000453560	PMFBP1	Q8TBY8	1022 aa		27.97	■■■□□ 2.07
RAP1B-208	ENST00000453560	ABCA3	Q99758	1704 aa		27.97	■■■□□ 2.07
RAP1B-208	ENST00000453560	TOPAZ1	Q8N9V7	1692 aa		27.96	■■■□□ 2.07
RAP1B-208	ENST00000453560	RXRB	P28702	533 aa		27.95	■■■□□ 2.06
RAP1B-208	ENST00000453560	NEUROD1	Q13562	356 aa		27.95	■■■□□ 2.06
RAP1B-208	ENST00000453560	ALS2	Q96Q42	1657 aa		27.94	■■■□□ 2.06
RAP1B-208	ENST00000453560	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.94	■■■□□ 2.06
RAP1B-208	ENST00000453560	QRICH2	Q9H0J4	1663 aa		27.94	■■■□□ 2.06
RAP1B-208	ENST00000453560	QTRT2	Q9H974	415 aa	Known RBP	27.92	■■■□□ 2.06
RAP1B-208	ENST00000453560	ARHGEF10	O15013	1369 aa		27.91	■■■□□ 2.06
RAP1B-208	ENST00000453560	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.9	■■■□□ 2.06
RAP1B-208	ENST00000453560	USP21	Q9UK80	565 aa		27.9	■■■□□ 2.06
RAP1B-208	ENST00000453560	BCL9L	Q86UU0	1499 aa		27.89	■■■□□ 2.05
RAP1B-208	ENST00000453560	RBM6	P78332	1123 aa	Known RBP	27.88	■■■□□ 2.05
RAP1B-208	ENST00000453560	NUDT16	Q96DE0	195 aa	Known RBP	27.88	■■■□□ 2.05
RAP1B-208	ENST00000453560	CDK19	Q9BWU1	502 aa		27.88	■■■□□ 2.05
RAP1B-208	ENST00000453560	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.88	■■■□□ 2.05
RAP1B-208	ENST00000453560	GPRASP1	Q5JY77	1395 aa		27.87	■■■□□ 2.05
RAP1B-208	ENST00000453560	RGS12	O14924	1447 aa		27.86	■■■□□ 2.05
RAP1B-208	ENST00000453560	ATRN	O75882	1429 aa		27.86	■■■□□ 2.05
RAP1B-208	ENST00000453560	CRYBG1	Q9Y4K1	1723 aa		27.85	■■■□□ 2.05
RAP1B-208	ENST00000453560	SLIT2	O94813	1529 aa		27.84	■■■□□ 2.05
RAP1B-208	ENST00000453560	TRPC5	Q9UL62	973 aa	Predicted RBP	27.84	■■■□□ 2.05
RAP1B-208	ENST00000453560	LMOD2	Q6P5Q4	547 aa		27.83	■■■□□ 2.05
RAP1B-208	ENST00000453560	NGDN	Q8NEJ9	315 aa	Known RBP	27.83	■■■□□ 2.05
RAP1B-208	ENST00000453560	CABLES1	Q8TDN4	633 aa		27.83	■■■□□ 2.05
RAP1B-208	ENST00000453560	PLCH1	Q4KWH8	1693 aa		27.83	■■■□□ 2.05
RAP1B-208	ENST00000453560	ROCK2	O75116	1388 aa	Known RBP	27.82	■■■□□ 2.04
RAP1B-208	ENST00000453560	POLR3A	O14802	1390 aa	Predicted RBP	27.81	■■■□□ 2.04
RAP1B-208	ENST00000453560	NWD2	Q9ULI1	1742 aa		27.81	■■■□□ 2.04
RAP1B-208	ENST00000453560	CCDC61	Q9Y6R9	512 aa		27.8	■■■□□ 2.04
RAP1B-208	ENST00000453560	NBPF8	Q3BBV2	869 aa		27.79	■■■□□ 2.04
RAP1B-208	ENST00000453560	HAP1	P54257	671 aa	Predicted RBP	27.78	■■■□□ 2.04
RAP1B-208	ENST00000453560	TONSL	Q96HA7	1378 aa		27.76	■■■□□ 2.03
RAP1B-208	ENST00000453560	PLEKHG3	A1L390	1219 aa		27.76	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms