RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 ADGRB1O14514 1584 aa43.76■■■■■ 4.6
CCDC117-206ENST00000453543 STAC3Q96MF2 364 aa43.74■■■■■ 4.59
CCDC117-206ENST00000453543 DDX17Q92841 729 aaKnown RBP43.72■■■■■ 4.59
CCDC117-206ENST00000453543 SIRT1Q96EB6 747 aa43.71■■■■■ 4.59
CCDC117-206ENST00000453543 ORAI2Q96SN7 254 aa43.7■■■■■ 4.59
CCDC117-206ENST00000453543 SHPRHQ149N8 1683 aa43.68■■■■■ 4.58
CCDC117-206ENST00000453543 DLC1Q96QB1 1528 aa43.66■■■■■ 4.58
CCDC117-206ENST00000453543 PRAM1Q96QH2 718 aa43.63■■■■■ 4.57
CCDC117-206ENST00000453543 FMN2Q9NZ56 1722 aa43.62■■■■■ 4.57
CCDC117-206ENST00000453543 TRIM26Q12899 539 aaPredicted RBP43.61■■■■■ 4.57
CCDC117-206ENST00000453543 NUTM2FA1L443 756 aa43.6■■■■■ 4.57
CCDC117-206ENST00000453543 SAFB2Q14151 953 aaKnown RBP eCLIP43.6■■■■■ 4.57
CCDC117-206ENST00000453543 SPATA31A6Q5VVP1 1343 aa43.59■■■■■ 4.57
CCDC117-206ENST00000453543 RGS17Q9UGC6 210 aaPredicted RBP43.59■■■■■ 4.57
CCDC117-206ENST00000453543 TRAK1Q9UPV9 953 aa43.59■■■■■ 4.57
CCDC117-206ENST00000453543 LRP6O75581 1613 aa43.59■■■■■ 4.57
CCDC117-206ENST00000453543 ESCO1Q5FWF5 840 aa43.56■■■■■ 4.56
CCDC117-206ENST00000453543 SIN3AQ96ST3 1273 aa43.55■■■■■ 4.56
CCDC117-206ENST00000453543 POGKQ9P215 609 aa43.55■■■■■ 4.56
CCDC117-206ENST00000453543 LRRC59Q96AG4 307 aaKnown RBP43.54■■■■■ 4.56
CCDC117-206ENST00000453543 SOS2Q07890 1332 aaPredicted RBP43.49■■■■■ 4.55
CCDC117-206ENST00000453543 KIAA1210Q9ULL0 1709 aa43.49■■■■■ 4.55
CCDC117-206ENST00000453543 PNPLA6Q8IY17 1366 aa43.48■■■■■ 4.55
CCDC117-206ENST00000453543 ADGRB2O60241 1585 aa43.46■■■■■ 4.55
CCDC117-206ENST00000453543 ARHGEF28Q8N1W1 1705 aaKnown RBP43.45■■■■■ 4.55
CCDC117-206ENST00000453543 SOCS7O14512 581 aa43.44■■■■■ 4.54
CCDC117-206ENST00000453543 NEUROD1Q13562 356 aa43.44■■■■■ 4.54
CCDC117-206ENST00000453543 L3MBTL2Q969R5 705 aa43.44■■■■■ 4.54
CCDC117-206ENST00000453543 RGPD8O14715 1765 aaPredicted RBP43.44■■■■■ 4.54
CCDC117-206ENST00000453543 NUTM2BA6NNL0 878 aaPredicted RBP43.43■■■■■ 4.54
CCDC117-206ENST00000453543 NUTM2EB1AL46 878 aaPredicted RBP43.43■■■■■ 4.54
CCDC117-206ENST00000453543 NUTM2AQ8IVF1 878 aaPredicted RBP43.43■■■■■ 4.54
CCDC117-206ENST00000453543 NPHP3Q7Z494 1330 aa43.43■■■■■ 4.54
CCDC117-206ENST00000453543 FOXO3O43524 673 aa43.42■■■■■ 4.54
CCDC117-206ENST00000453543 PXDNQ92626 1479 aa43.41■■■■■ 4.54
CCDC117-206ENST00000453543 MEX3CQ5U5Q3 659 aaKnown RBP43.4■■■■■ 4.54
CCDC117-206ENST00000453543 HIRIP3Q9BW71 556 aaPredicted RBP43.4■■■■■ 4.54
CCDC117-206ENST00000453543 MINK1Q8N4C8 1332 aaPredicted RBP43.4■■■■■ 4.54
CCDC117-206ENST00000453543 KIF1AQ12756 1690 aa43.4■■■■■ 4.54
CCDC117-206ENST00000453543 XPCQ01831 940 aaPredicted RBP43.38■■■■■ 4.53
CCDC117-206ENST00000453543 NBPF1Q3BBV0 1214 aa43.38■■■■■ 4.53
CCDC117-206ENST00000453543 POTEAQ6S8J7 498 aa43.36■■■■■ 4.53
CCDC117-206ENST00000453543 USP32Q8NFA0 1604 aa43.36■■■■■ 4.53
CCDC117-206ENST00000453543 ANKARQ7Z5J8 1434 aa43.31■■■■■ 4.52
CCDC117-206ENST00000453543 PHF8Q9UPP1 1060 aa43.29■■■■■ 4.52
CCDC117-206ENST00000453543 COL22A1Q8NFW1 1626 aaPredicted RBP43.27■■■■■ 4.52
CCDC117-206ENST00000453543 WASLO00401 505 aaPredicted RBP43.25■■■■■ 4.51
CCDC117-206ENST00000453543 TULP4Q9NRJ4 1543 aa43.25■■■■■ 4.51
CCDC117-206ENST00000453543 PRR36Q9H6K5 1346 aa43.22■■■■■ 4.51
CCDC117-206ENST00000453543 TRPM1Q7Z4N2 1603 aa43.22■■■■■ 4.51
CCDC117-206ENST00000453543 EIF3AQ14152 1382 aaKnown RBP43.22■■■■■ 4.51
CCDC117-206ENST00000453543 KRT28Q7Z3Y7 464 aa43.2■■■■■ 4.51
CCDC117-206ENST00000453543 ADAMTS2O95450 1211 aa43.18■■■■■ 4.5
CCDC117-206ENST00000453543 PMFBP1Q8TBY8 1022 aa43.18■■■■■ 4.5
CCDC117-206ENST00000453543 ZNF772Q68DY9 489 aaPredicted RBP43.16■■■■■ 4.5
CCDC117-206ENST00000453543 C8orf37Q96NL8 207 aa43.15■■■■■ 4.5
CCDC117-206ENST00000453543 AFF2P51816 1311 aa43.15■■■■■ 4.5
CCDC117-206ENST00000453543 SPATA31A3Q5VYP0 1347 aa43.15■■■■■ 4.5
CCDC117-206ENST00000453543 ATP7BP35670 1465 aa43.11■■■■■ 4.49
CCDC117-206ENST00000453543 TNS3Q68CZ2 1445 aa43.09■■■■■ 4.49
CCDC117-206ENST00000453543 CENPJQ9HC77 1338 aaPredicted RBP43.08■■■■■ 4.49
CCDC117-206ENST00000453543 PSME1Q06323 249 aa43.08■■■■■ 4.49
CCDC117-206ENST00000453543 NBPF8Q3BBV2 869 aa43.08■■■■■ 4.49
CCDC117-206ENST00000453543 CDK19Q9BWU1 502 aa43.08■■■■■ 4.49
CCDC117-206ENST00000453543 ROCK2O75116 1388 aaKnown RBP43.06■■■■■ 4.48
CCDC117-206ENST00000453543 ITSN1Q15811 1721 aa43.06■■■■■ 4.48
CCDC117-206ENST00000453543 QRICH2Q9H0J4 1663 aa43.06■■■■■ 4.48
CCDC117-206ENST00000453543 TONSLQ96HA7 1378 aa43.05■■■■■ 4.48
CCDC117-206ENST00000453543 SBNO1A3KN83 1393 aa43.04■■■■■ 4.48
CCDC117-206ENST00000453543 NUDT16Q96DE0 195 aaKnown RBP43.04■■■■■ 4.48
CCDC117-206ENST00000453543 NGLY1Q96IV0 654 aa43.03■■■■■ 4.48
CCDC117-206ENST00000453543 TRPM3Q9HCF6 1732 aaPredicted RBP43.02■■■■■ 4.48
CCDC117-206ENST00000453543 MARF1Q9Y4F3 1742 aaKnown RBP43■■■■■ 4.47
CCDC117-206ENST00000453543 TOPAZ1Q8N9V7 1692 aa42.99■■■■■ 4.47
CCDC117-206ENST00000453543 GPRASP1Q5JY77 1395 aa42.97■■■■■ 4.47
CCDC117-206ENST00000453543 LMOD2Q6P5Q4 547 aa42.96■■■■■ 4.47
CCDC117-206ENST00000453543 NGDNQ8NEJ9 315 aaKnown RBP42.96■■■■■ 4.47
CCDC117-206ENST00000453543 ARHGEF10O15013 1369 aa42.94■■■■■ 4.46
CCDC117-206ENST00000453543 ALS2Q96Q42 1657 aa42.92■■■■■ 4.46
CCDC117-206ENST00000453543 ABCA3Q99758 1704 aa42.91■■■■■ 4.46
CCDC117-206ENST00000453543 PLEKHG5O94827 1062 aa42.91■■■■■ 4.46
CCDC117-206ENST00000453543 RXRBP28702 533 aa42.91■■■■■ 4.46
CCDC117-206ENST00000453543 CABLES1Q8TDN4 633 aa42.91■■■■■ 4.46
CCDC117-206ENST00000453543 FNBP4Q8N3X1 1017 aaPredicted RBP42.9■■■■■ 4.46
CCDC117-206ENST00000453543 QTRT2Q9H974 415 aaKnown RBP42.9■■■■■ 4.46
CCDC117-206ENST00000453543 SRPK2P78362 688 aaKnown RBP42.89■■■■■ 4.46
CCDC117-206ENST00000453543 CCDC61Q9Y6R9 512 aa42.89■■■■■ 4.46
CCDC117-206ENST00000453543 USP21Q9UK80 565 aa42.88■■■■■ 4.45
CCDC117-206ENST00000453543 RALGAPBQ86X10 1494 aa42.87■■■■■ 4.45
CCDC117-206ENST00000453543 CABP2Q9NPB3 220 aa42.87■■■■■ 4.45
CCDC117-206ENST00000453543 PCGF6Q9BYE7 350 aa42.86■■■■■ 4.45
CCDC117-206ENST00000453543 POLR3AO14802 1390 aaPredicted RBP42.84■■■■■ 4.45
CCDC117-206ENST00000453543 HAP1P54257 671 aaPredicted RBP42.84■■■■■ 4.45
CCDC117-206ENST00000453543 ACEP12821 1306 aa42.82■■■■■ 4.45
CCDC117-206ENST00000453543 PLEKHG3A1L390 1219 aa42.81■■■■■ 4.44
CCDC117-206ENST00000453543 PAK3O75914 559 aaPredicted RBP42.81■■■■■ 4.44
CCDC117-206ENST00000453543 BCL9LQ86UU0 1499 aa42.81■■■■■ 4.44
CCDC117-206ENST00000453543 PPIP5K1Q6PFW1 1433 aa42.8■■■■■ 4.44
CCDC117-206ENST00000453543 CARD11Q9BXL7 1154 aa42.8■■■■■ 4.44
CCDC117-206ENST00000453543 CDK12Q9NYV4 1490 aaPredicted RBP42.8■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms