RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ROCK2O75116 1388 aaKnown RBP12.62□□□□□ -0.39
COL8A1-203ENST00000452013 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
COL8A1-203ENST00000452013 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
COL8A1-203ENST00000452013 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-203ENST00000452013 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
COL8A1-203ENST00000452013 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
COL8A1-203ENST00000452013 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
COL8A1-203ENST00000452013 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
COL8A1-203ENST00000452013 MST1RQ04912 1400 aa12.61□□□□□ -0.39
COL8A1-203ENST00000452013 WASLO00401 505 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-203ENST00000452013 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-203ENST00000452013 CENPJQ9HC77 1338 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-203ENST00000452013 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
COL8A1-203ENST00000452013 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
COL8A1-203ENST00000452013 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
COL8A1-203ENST00000452013 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
COL8A1-203ENST00000452013 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-203ENST00000452013 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
COL8A1-203ENST00000452013 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
COL8A1-203ENST00000452013 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
COL8A1-203ENST00000452013 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
COL8A1-203ENST00000452013 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
COL8A1-203ENST00000452013 FOXO3O43524 673 aa12.55□□□□□ -0.4
COL8A1-203ENST00000452013 PSME1Q06323 249 aa12.55□□□□□ -0.4
COL8A1-203ENST00000452013 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
COL8A1-203ENST00000452013 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
COL8A1-203ENST00000452013 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
COL8A1-203ENST00000452013 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
COL8A1-203ENST00000452013 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
COL8A1-203ENST00000452013 CDC42BPGQ6DT37 1551 aa12.53□□□□□ -0.4
COL8A1-203ENST00000452013 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
COL8A1-203ENST00000452013 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
COL8A1-203ENST00000452013 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
COL8A1-203ENST00000452013 JCADQ9P266 1359 aa12.53□□□□□ -0.4
COL8A1-203ENST00000452013 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
COL8A1-203ENST00000452013 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
COL8A1-203ENST00000452013 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
COL8A1-203ENST00000452013 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-203ENST00000452013 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
COL8A1-203ENST00000452013 RALGAPBQ86X10 1494 aa12.51□□□□□ -0.41
COL8A1-203ENST00000452013 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
COL8A1-203ENST00000452013 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
COL8A1-203ENST00000452013 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
COL8A1-203ENST00000452013 PRR36Q9H6K5 1346 aa12.49□□□□□ -0.41
COL8A1-203ENST00000452013 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
COL8A1-203ENST00000452013 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
COL8A1-203ENST00000452013 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
COL8A1-203ENST00000452013 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-203ENST00000452013 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-203ENST00000452013 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
COL8A1-203ENST00000452013 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-203ENST00000452013 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-203ENST00000452013 NUTM2AQ8IVF1 878 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-203ENST00000452013 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-203ENST00000452013 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
COL8A1-203ENST00000452013 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
COL8A1-203ENST00000452013 TULP4Q9NRJ4 1543 aa12.46□□□□□ -0.42
COL8A1-203ENST00000452013 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
COL8A1-203ENST00000452013 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
COL8A1-203ENST00000452013 ACEP12821 1306 aa12.45□□□□□ -0.42
COL8A1-203ENST00000452013 SPATA31A3Q5VYP0 1347 aa12.45□□□□□ -0.42
COL8A1-203ENST00000452013 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
COL8A1-203ENST00000452013 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
COL8A1-203ENST00000452013 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
COL8A1-203ENST00000452013 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
COL8A1-203ENST00000452013 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-203ENST00000452013 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-203ENST00000452013 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL8A1-203ENST00000452013 TMF1P82094 1093 aa12.44□□□□□ -0.42
COL8A1-203ENST00000452013 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
COL8A1-203ENST00000452013 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
COL8A1-203ENST00000452013 USP47Q96K76 1375 aa12.43□□□□□ -0.42
COL8A1-203ENST00000452013 TESK2Q96S53 571 aa12.43□□□□□ -0.42
COL8A1-203ENST00000452013 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
COL8A1-203ENST00000452013 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
COL8A1-203ENST00000452013 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
COL8A1-203ENST00000452013 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
COL8A1-203ENST00000452013 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-203ENST00000452013 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
COL8A1-203ENST00000452013 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
COL8A1-203ENST00000452013 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-203ENST00000452013 ATP7BP35670 1465 aa12.41□□□□□ -0.42
COL8A1-203ENST00000452013 PXDNQ92626 1479 aa12.41□□□□□ -0.42
COL8A1-203ENST00000452013 COL16A1Q07092 1604 aaPredicted RBP12.41□□□□□ -0.42
COL8A1-203ENST00000452013 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
COL8A1-203ENST00000452013 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
COL8A1-203ENST00000452013 BRD4O60885 1362 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-203ENST00000452013 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-203ENST00000452013 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
COL8A1-203ENST00000452013 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
COL8A1-203ENST00000452013 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
COL8A1-203ENST00000452013 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
COL8A1-203ENST00000452013 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
COL8A1-203ENST00000452013 HSPA5P11021 654 aaKnown RBP12.38□□□□□ -0.43
COL8A1-203ENST00000452013 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-203ENST00000452013 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
COL8A1-203ENST00000452013 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
COL8A1-203ENST00000452013 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
COL8A1-203ENST00000452013 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
COL8A1-203ENST00000452013 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms