RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
GTF3C3-206ENST00000448539 KNDC1Q76NI1 1749 aa20.05■□□□□ 0.8
GTF3C3-206ENST00000448539 NBPF1Q3BBV0 1214 aa20.04■□□□□ 0.8
GTF3C3-206ENST00000448539 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
GTF3C3-206ENST00000448539 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.03■□□□□ 0.8
GTF3C3-206ENST00000448539 KIAA1210Q9ULL0 1709 aa20.03■□□□□ 0.8
GTF3C3-206ENST00000448539 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
GTF3C3-206ENST00000448539 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
GTF3C3-206ENST00000448539 DLC1Q96QB1 1528 aa20.02■□□□□ 0.79
GTF3C3-206ENST00000448539 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
GTF3C3-206ENST00000448539 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
GTF3C3-206ENST00000448539 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
GTF3C3-206ENST00000448539 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
GTF3C3-206ENST00000448539 MST1RQ04912 1400 aa19.95■□□□□ 0.78
GTF3C3-206ENST00000448539 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
GTF3C3-206ENST00000448539 MINK1Q8N4C8 1332 aaPredicted RBP19.94■□□□□ 0.78
GTF3C3-206ENST00000448539 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
GTF3C3-206ENST00000448539 CDC42BPGQ6DT37 1551 aa19.93■□□□□ 0.78
GTF3C3-206ENST00000448539 CARD11Q9BXL7 1154 aa19.93■□□□□ 0.78
GTF3C3-206ENST00000448539 BRINP3Q76B58 766 aa19.92■□□□□ 0.78
GTF3C3-206ENST00000448539 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
GTF3C3-206ENST00000448539 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
GTF3C3-206ENST00000448539 NUTM2FA1L443 756 aa19.91■□□□□ 0.78
GTF3C3-206ENST00000448539 EIF3AQ14152 1382 aaKnown RBP19.91■□□□□ 0.78
GTF3C3-206ENST00000448539 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
GTF3C3-206ENST00000448539 RALGAPBQ86X10 1494 aa19.9■□□□□ 0.78
GTF3C3-206ENST00000448539 ARHGEF28Q8N1W1 1705 aaKnown RBP19.9■□□□□ 0.78
GTF3C3-206ENST00000448539 ESCO1Q5FWF5 840 aa19.89■□□□□ 0.77
GTF3C3-206ENST00000448539 GPRASP1Q5JY77 1395 aa19.89■□□□□ 0.77
GTF3C3-206ENST00000448539 RGS17Q9UGC6 210 aaPredicted RBP19.89■□□□□ 0.77
GTF3C3-206ENST00000448539 ORAI2Q96SN7 254 aa19.87■□□□□ 0.77
GTF3C3-206ENST00000448539 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
GTF3C3-206ENST00000448539 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
GTF3C3-206ENST00000448539 ADGRB2O60241 1585 aa19.85■□□□□ 0.77
GTF3C3-206ENST00000448539 JCADQ9P266 1359 aa19.83■□□□□ 0.77
GTF3C3-206ENST00000448539 FMN2Q9NZ56 1722 aa19.83■□□□□ 0.77
GTF3C3-206ENST00000448539 AHDC1Q5TGY3 1603 aaPredicted RBP19.83■□□□□ 0.76
GTF3C3-206ENST00000448539 CDK19Q9BWU1 502 aa19.82■□□□□ 0.76
GTF3C3-206ENST00000448539 ANKARQ7Z5J8 1434 aa19.82■□□□□ 0.76
GTF3C3-206ENST00000448539 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
GTF3C3-206ENST00000448539 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
GTF3C3-206ENST00000448539 PHF8Q9UPP1 1060 aa19.8■□□□□ 0.76
GTF3C3-206ENST00000448539 NPHP3Q7Z494 1330 aa19.79■□□□□ 0.76
GTF3C3-206ENST00000448539 TULP4Q9NRJ4 1543 aa19.79■□□□□ 0.76
GTF3C3-206ENST00000448539 EVC2Q86UK5 1308 aa19.78■□□□□ 0.76
GTF3C3-206ENST00000448539 FOXO3O43524 673 aa19.78■□□□□ 0.76
GTF3C3-206ENST00000448539 POTEAQ6S8J7 498 aa19.78■□□□□ 0.76
GTF3C3-206ENST00000448539 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
GTF3C3-206ENST00000448539 LRRC59Q96AG4 307 aaKnown RBP19.77■□□□□ 0.76
GTF3C3-206ENST00000448539 NUDT16Q96DE0 195 aaKnown RBP19.77■□□□□ 0.76
GTF3C3-206ENST00000448539 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
GTF3C3-206ENST00000448539 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
GTF3C3-206ENST00000448539 PMFBP1Q8TBY8 1022 aa19.75■□□□□ 0.75
GTF3C3-206ENST00000448539 LRP6O75581 1613 aa19.75■□□□□ 0.75
GTF3C3-206ENST00000448539 NHSL1Q5SYE7 1610 aa19.75■□□□□ 0.75
GTF3C3-206ENST00000448539 CABP2Q9NPB3 220 aa19.74■□□□□ 0.75
GTF3C3-206ENST00000448539 KIF1AQ12756 1690 aa19.74■□□□□ 0.75
GTF3C3-206ENST00000448539 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
GTF3C3-206ENST00000448539 SPATA31A6Q5VVP1 1343 aa19.74■□□□□ 0.75
GTF3C3-206ENST00000448539 USP47Q96K76 1375 aa19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 ST20-MTHFSA0A0A6YYL1 179 aa19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 PSME1Q06323 249 aa19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
GTF3C3-206ENST00000448539 SBNO2Q9Y2G9 1366 aa19.72■□□□□ 0.75
GTF3C3-206ENST00000448539 KRT28Q7Z3Y7 464 aa19.72■□□□□ 0.75
GTF3C3-206ENST00000448539 USP32Q8NFA0 1604 aa19.72■□□□□ 0.75
GTF3C3-206ENST00000448539 RGPD8O14715 1765 aaPredicted RBP19.71■□□□□ 0.75
GTF3C3-206ENST00000448539 ATP7BP35670 1465 aa19.71■□□□□ 0.75
GTF3C3-206ENST00000448539 MEX3CQ5U5Q3 659 aaKnown RBP19.68■□□□□ 0.74
GTF3C3-206ENST00000448539 PXDNQ92626 1479 aa19.67■□□□□ 0.74
GTF3C3-206ENST00000448539 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
GTF3C3-206ENST00000448539 ITSN1Q15811 1721 aa19.67■□□□□ 0.74
GTF3C3-206ENST00000448539 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
GTF3C3-206ENST00000448539 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
GTF3C3-206ENST00000448539 TESK2Q96S53 571 aa19.66■□□□□ 0.74
GTF3C3-206ENST00000448539 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 EIF4G2P78344 907 aaKnown RBP eCLIP19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 LMOD2Q6P5Q4 547 aa19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 CABP1Q9NZU7 370 aa19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 ACEP12821 1306 aa19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 PNPLA6Q8IY17 1366 aa19.65■□□□□ 0.74
GTF3C3-206ENST00000448539 TMF1P82094 1093 aa19.64■□□□□ 0.73
GTF3C3-206ENST00000448539 SBNO1A3KN83 1393 aa19.63■□□□□ 0.73
GTF3C3-206ENST00000448539 SPATA31A3Q5VYP0 1347 aa19.63■□□□□ 0.73
GTF3C3-206ENST00000448539 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
GTF3C3-206ENST00000448539 POLR3AO14802 1390 aaPredicted RBP19.62■□□□□ 0.73
GTF3C3-206ENST00000448539 PUS7Q96PZ0 661 aaKnown RBP19.62■□□□□ 0.73
GTF3C3-206ENST00000448539 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
GTF3C3-206ENST00000448539 TNS3Q68CZ2 1445 aa19.61■□□□□ 0.73
GTF3C3-206ENST00000448539 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
GTF3C3-206ENST00000448539 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
GTF3C3-206ENST00000448539 ARHGEF10O15013 1369 aa19.6■□□□□ 0.73
GTF3C3-206ENST00000448539 ZNF772Q68DY9 489 aaPredicted RBP19.6■□□□□ 0.73
GTF3C3-206ENST00000448539 HSPA5P11021 654 aaKnown RBP19.59■□□□□ 0.73
GTF3C3-206ENST00000448539 HAP1P54257 671 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms