RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
LINC00342-202ENST00000448494 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
LINC00342-202ENST00000448494 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
LINC00342-202ENST00000448494 TNNT3P45378 269 aaPredicted RBP13.23□□□□□ -0.29
LINC00342-202ENST00000448494 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
LINC00342-202ENST00000448494 CFAP43Q8NDM7 1665 aa13.22□□□□□ -0.29
LINC00342-202ENST00000448494 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
LINC00342-202ENST00000448494 BANK1Q8NDB2 785 aa13.22□□□□□ -0.29
LINC00342-202ENST00000448494 ZBTB9Q96C00 473 aa13.22□□□□□ -0.29
LINC00342-202ENST00000448494 NCAPGQ9BPX3 1015 aa13.22□□□□□ -0.29
LINC00342-202ENST00000448494 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
LINC00342-202ENST00000448494 SYCP1Q15431 976 aa13.21□□□□□ -0.29
LINC00342-202ENST00000448494 RBSNQ9H1K0 784 aa13.21□□□□□ -0.29
LINC00342-202ENST00000448494 MORC2Q9Y6X9 1032 aaPredicted RBP13.21□□□□□ -0.29
LINC00342-202ENST00000448494 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
LINC00342-202ENST00000448494 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC00342-202ENST00000448494 CTIFO43310 598 aaKnown RBP13.21□□□□□ -0.3
LINC00342-202ENST00000448494 SNX21Q969T3 373 aa13.21□□□□□ -0.3
LINC00342-202ENST00000448494 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.3
LINC00342-202ENST00000448494 DDX41Q9UJV9 622 aaKnown RBP13.21□□□□□ -0.3
LINC00342-202ENST00000448494 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
LINC00342-202ENST00000448494 GTF2A1P52655 376 aaPredicted RBP13.2□□□□□ -0.3
LINC00342-202ENST00000448494 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 EGFL6Q8IUX8 553 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
LINC00342-202ENST00000448494 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
LINC00342-202ENST00000448494 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
LINC00342-202ENST00000448494 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
LINC00342-202ENST00000448494 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
LINC00342-202ENST00000448494 CEP83Q9Y592 693 aa13.19□□□□□ -0.3
LINC00342-202ENST00000448494 NAIPQ13075 1403 aa13.19□□□□□ -0.3
LINC00342-202ENST00000448494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
LINC00342-202ENST00000448494 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00342-202ENST00000448494 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
LINC00342-202ENST00000448494 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
LINC00342-202ENST00000448494 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
LINC00342-202ENST00000448494 ZSCAN23Q3MJ62 389 aa13.18□□□□□ -0.3
LINC00342-202ENST00000448494 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
LINC00342-202ENST00000448494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00342-202ENST00000448494 CLASP1Q7Z460 1538 aa13.17□□□□□ -0.3
LINC00342-202ENST00000448494 IGHDP01880 384 aa13.17□□□□□ -0.3
LINC00342-202ENST00000448494 TMED8Q6PL24 325 aaPredicted RBP13.17□□□□□ -0.3
LINC00342-202ENST00000448494 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
LINC00342-202ENST00000448494 RAD50Q92878 1312 aa13.17□□□□□ -0.3
LINC00342-202ENST00000448494 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
LINC00342-202ENST00000448494 ICE2Q659A1 982 aa13.16□□□□□ -0.3
LINC00342-202ENST00000448494 CCDC172P0C7W6 258 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 SATB1Q01826 763 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 RSPH14Q9UHP6 348 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
LINC00342-202ENST00000448494 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 RASSF4Q9H2L5 321 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
LINC00342-202ENST00000448494 CUX1P39880 1505 aa13.15□□□□□ -0.3
LINC00342-202ENST00000448494 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
LINC00342-202ENST00000448494 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
LINC00342-202ENST00000448494 FBLN2P98095 1184 aa13.14□□□□□ -0.31
LINC00342-202ENST00000448494 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
LINC00342-202ENST00000448494 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
LINC00342-202ENST00000448494 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
LINC00342-202ENST00000448494 TEX14Q8IWB6 1497 aa13.13□□□□□ -0.31
LINC00342-202ENST00000448494 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
LINC00342-202ENST00000448494 FAM177BA6PVY3 158 aa13.13□□□□□ -0.31
LINC00342-202ENST00000448494 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
LINC00342-202ENST00000448494 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
LINC00342-202ENST00000448494 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
LINC00342-202ENST00000448494 CFAP65Q6ZU64 1925 aaKnown RBP13.12□□□□□ -0.31
LINC00342-202ENST00000448494 MLECQ14165 292 aa13.12□□□□□ -0.31
LINC00342-202ENST00000448494 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
LINC00342-202ENST00000448494 LRSAM1Q6UWE0 723 aa13.12□□□□□ -0.31
LINC00342-202ENST00000448494 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
LINC00342-202ENST00000448494 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
LINC00342-202ENST00000448494 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
LINC00342-202ENST00000448494 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
LINC00342-202ENST00000448494 PLCD4Q9BRC7 762 aa13.11□□□□□ -0.31
LINC00342-202ENST00000448494 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
LINC00342-202ENST00000448494 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
LINC00342-202ENST00000448494 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 CYP2C19P33261 490 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
LINC00342-202ENST00000448494 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 REC8O95072 547 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 HNRNPH2P55795 449 aaKnown RBP13.1□□□□□ -0.31
LINC00342-202ENST00000448494 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
LINC00342-202ENST00000448494 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
LINC00342-202ENST00000448494 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
LINC00342-202ENST00000448494 SNAPC4Q5SXM2 1469 aa13.09□□□□□ -0.31
LINC00342-202ENST00000448494 KIF1CO43896 1103 aaKnown RBP13.09□□□□□ -0.31
LINC00342-202ENST00000448494 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
LINC00342-202ENST00000448494 EP400NLQ6ZTU2 488 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms