RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ORAI2Q96SN7 254 aa25.96■■□□□ 1.75
DDX56-207ENST00000448192 LRP6O75581 1613 aa25.96■■□□□ 1.75
DDX56-207ENST00000448192 CDC42BPGQ6DT37 1551 aa25.95■■□□□ 1.75
DDX56-207ENST00000448192 MEX3CQ5U5Q3 659 aaKnown RBP25.95■■□□□ 1.74
DDX56-207ENST00000448192 LRRC59Q96AG4 307 aaKnown RBP25.94■■□□□ 1.74
DDX56-207ENST00000448192 NUTM2BA6NNL0 878 aaPredicted RBP25.93■■□□□ 1.74
DDX56-207ENST00000448192 NUTM2EB1AL46 878 aaPredicted RBP25.93■■□□□ 1.74
DDX56-207ENST00000448192 POTEAQ6S8J7 498 aa25.93■■□□□ 1.74
DDX56-207ENST00000448192 NUTM2AQ8IVF1 878 aaPredicted RBP25.93■■□□□ 1.74
DDX56-207ENST00000448192 PLEKHH1Q9ULM0 1364 aa25.93■■□□□ 1.74
DDX56-207ENST00000448192 DHX57Q6P158 1386 aaKnown RBP25.92■■□□□ 1.74
DDX56-207ENST00000448192 KDM2AQ9Y2K7 1162 aa25.91■■□□□ 1.74
DDX56-207ENST00000448192 DCAF11Q8TEB1 546 aa25.9■■□□□ 1.74
DDX56-207ENST00000448192 NUTM2FA1L443 756 aa25.88■■□□□ 1.73
DDX56-207ENST00000448192 ESCO1Q5FWF5 840 aa25.88■■□□□ 1.73
DDX56-207ENST00000448192 SIRT1Q96EB6 747 aa25.86■■□□□ 1.73
DDX56-207ENST00000448192 FMN2Q9NZ56 1722 aa25.85■■□□□ 1.73
DDX56-207ENST00000448192 PNPLA6Q8IY17 1366 aa25.85■■□□□ 1.73
DDX56-207ENST00000448192 SOS2Q07890 1332 aaPredicted RBP25.84■■□□□ 1.73
DDX56-207ENST00000448192 SAFB2Q14151 953 aaKnown RBP eCLIP25.83■■□□□ 1.73
DDX56-207ENST00000448192 PRAM1Q96QH2 718 aa25.82■■□□□ 1.72
DDX56-207ENST00000448192 STAC3Q96MF2 364 aa25.81■■□□□ 1.72
DDX56-207ENST00000448192 RGPD8O14715 1765 aaPredicted RBP25.8■■□□□ 1.72
DDX56-207ENST00000448192 ZNF772Q68DY9 489 aaPredicted RBP25.8■■□□□ 1.72
DDX56-207ENST00000448192 POGKQ9P215 609 aa25.8■■□□□ 1.72
DDX56-207ENST00000448192 ADGRB1O14514 1584 aa25.8■■□□□ 1.72
DDX56-207ENST00000448192 NPHP3Q7Z494 1330 aa25.8■■□□□ 1.72
DDX56-207ENST00000448192 FOXO3O43524 673 aa25.79■■□□□ 1.72
DDX56-207ENST00000448192 DLC1Q96QB1 1528 aa25.78■■□□□ 1.72
DDX56-207ENST00000448192 TRAK1Q9UPV9 953 aa25.78■■□□□ 1.72
DDX56-207ENST00000448192 XPCQ01831 940 aaPredicted RBP25.77■■□□□ 1.72
DDX56-207ENST00000448192 KIF1AQ12756 1690 aa25.75■■□□□ 1.71
DDX56-207ENST00000448192 PXDNQ92626 1479 aa25.75■■□□□ 1.71
DDX56-207ENST00000448192 AFF2P51816 1311 aa25.75■■□□□ 1.71
DDX56-207ENST00000448192 C8orf37Q96NL8 207 aa25.75■■□□□ 1.71
DDX56-207ENST00000448192 ADAMTS2O95450 1211 aa25.74■■□□□ 1.71
DDX56-207ENST00000448192 COL22A1Q8NFW1 1626 aaPredicted RBP25.72■■□□□ 1.71
DDX56-207ENST00000448192 NGLY1Q96IV0 654 aa25.69■■□□□ 1.7
DDX56-207ENST00000448192 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
DDX56-207ENST00000448192 PHF8Q9UPP1 1060 aa25.69■■□□□ 1.7
DDX56-207ENST00000448192 ADGRB2O60241 1585 aa25.69■■□□□ 1.7
DDX56-207ENST00000448192 MINK1Q8N4C8 1332 aaPredicted RBP25.68■■□□□ 1.7
DDX56-207ENST00000448192 ARHGEF28Q8N1W1 1705 aaKnown RBP25.67■■□□□ 1.7
DDX56-207ENST00000448192 RXRBP28702 533 aa25.66■■□□□ 1.7
DDX56-207ENST00000448192 KRT28Q7Z3Y7 464 aa25.66■■□□□ 1.7
DDX56-207ENST00000448192 USP32Q8NFA0 1604 aa25.66■■□□□ 1.7
DDX56-207ENST00000448192 KIAA1210Q9ULL0 1709 aa25.65■■□□□ 1.7
DDX56-207ENST00000448192 MARF1Q9Y4F3 1742 aaKnown RBP25.63■■□□□ 1.69
DDX56-207ENST00000448192 ANKARQ7Z5J8 1434 aa25.63■■□□□ 1.69
DDX56-207ENST00000448192 SPATA31A3Q5VYP0 1347 aa25.63■■□□□ 1.69
DDX56-207ENST00000448192 QTRT2Q9H974 415 aaKnown RBP25.62■■□□□ 1.69
DDX56-207ENST00000448192 PMFBP1Q8TBY8 1022 aa25.61■■□□□ 1.69
DDX56-207ENST00000448192 PSME1Q06323 249 aa25.6■■□□□ 1.69
DDX56-207ENST00000448192 WASLO00401 505 aaPredicted RBP25.59■■□□□ 1.69
DDX56-207ENST00000448192 EIF3AQ14152 1382 aaKnown RBP25.58■■□□□ 1.69
DDX56-207ENST00000448192 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
DDX56-207ENST00000448192 USP21Q9UK80 565 aa25.58■■□□□ 1.69
DDX56-207ENST00000448192 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.68
DDX56-207ENST00000448192 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
DDX56-207ENST00000448192 TNS3Q68CZ2 1445 aa25.56■■□□□ 1.68
DDX56-207ENST00000448192 LMOD2Q6P5Q4 547 aa25.56■■□□□ 1.68
DDX56-207ENST00000448192 PRR36Q9H6K5 1346 aa25.56■■□□□ 1.68
DDX56-207ENST00000448192 CDK12Q9NYV4 1490 aaPredicted RBP25.55■■□□□ 1.68
DDX56-207ENST00000448192 PLEKHG5O94827 1062 aa25.55■■□□□ 1.68
DDX56-207ENST00000448192 RBM6P78332 1123 aaKnown RBP25.55■■□□□ 1.68
DDX56-207ENST00000448192 NEUROD1Q13562 356 aa25.55■■□□□ 1.68
DDX56-207ENST00000448192 FNBP4Q8N3X1 1017 aaPredicted RBP25.55■■□□□ 1.68
DDX56-207ENST00000448192 L3MBTL2Q969R5 705 aa25.55■■□□□ 1.68
DDX56-207ENST00000448192 SBNO1A3KN83 1393 aa25.53■■□□□ 1.68
DDX56-207ENST00000448192 ITSN1Q15811 1721 aa25.52■■□□□ 1.68
DDX56-207ENST00000448192 HAP1P54257 671 aaPredicted RBP25.52■■□□□ 1.68
DDX56-207ENST00000448192 TRPC5Q9UL62 973 aaPredicted RBP25.51■■□□□ 1.67
DDX56-207ENST00000448192 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
DDX56-207ENST00000448192 CABLES1Q8TDN4 633 aa25.5■■□□□ 1.67
DDX56-207ENST00000448192 TRPM3Q9HCF6 1732 aaPredicted RBP25.49■■□□□ 1.67
DDX56-207ENST00000448192 RGS12O14924 1447 aa25.49■■□□□ 1.67
DDX56-207ENST00000448192 ARHGEF10O15013 1369 aa25.49■■□□□ 1.67
DDX56-207ENST00000448192 NGDNQ8NEJ9 315 aaKnown RBP25.49■■□□□ 1.67
DDX56-207ENST00000448192 NUDT16Q96DE0 195 aaKnown RBP25.48■■□□□ 1.67
DDX56-207ENST00000448192 CDK19Q9BWU1 502 aa25.48■■□□□ 1.67
DDX56-207ENST00000448192 ABCA3Q99758 1704 aa25.48■■□□□ 1.67
DDX56-207ENST00000448192 ATP7BP35670 1465 aa25.47■■□□□ 1.67
DDX56-207ENST00000448192 BCL9LQ86UU0 1499 aa25.47■■□□□ 1.67
DDX56-207ENST00000448192 ATRNO75882 1429 aa25.46■■□□□ 1.67
DDX56-207ENST00000448192 ALS2Q96Q42 1657 aa25.45■■□□□ 1.66
DDX56-207ENST00000448192 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.66
DDX56-207ENST00000448192 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
DDX56-207ENST00000448192 CENPJQ9HC77 1338 aaPredicted RBP25.43■■□□□ 1.66
DDX56-207ENST00000448192 QRICH2Q9H0J4 1663 aa25.43■■□□□ 1.66
DDX56-207ENST00000448192 PAK3O75914 559 aaPredicted RBP25.43■■□□□ 1.66
DDX56-207ENST00000448192 UPF1Q92900 1129 aaKnown RBP eCLIP25.43■■□□□ 1.66
DDX56-207ENST00000448192 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
DDX56-207ENST00000448192 TOPAZ1Q8N9V7 1692 aa25.42■■□□□ 1.66
DDX56-207ENST00000448192 SLIT2O94813 1529 aa25.41■■□□□ 1.66
DDX56-207ENST00000448192 UNC5CLQ8IV45 518 aa25.4■■□□□ 1.66
DDX56-207ENST00000448192 PLCH1Q4KWH8 1693 aa25.39■■□□□ 1.66
DDX56-207ENST00000448192 SRPK2P78362 688 aaKnown RBP25.38■■□□□ 1.65
DDX56-207ENST00000448192 CCDC61Q9Y6R9 512 aa25.38■■□□□ 1.65
DDX56-207ENST00000448192 GJD4Q96KN9 370 aaPredicted RBP25.37■■□□□ 1.65
DDX56-207ENST00000448192 ROCK2O75116 1388 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms