RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CDC42BPGQ6DT37 1551 aa36.08■■■■□ 3.37
UFD1-204ENST00000447868 C1orf167Q5SNV9 1468 aa36.08■■■■□ 3.37
UFD1-204ENST00000447868 SAFB2Q14151 953 aaKnown RBP eCLIP36.08■■■■□ 3.37
UFD1-204ENST00000447868 DLC1Q96QB1 1528 aa36.07■■■■□ 3.36
UFD1-204ENST00000447868 PCGF6Q9BYE7 350 aa36.06■■■■□ 3.36
UFD1-204ENST00000447868 AHDC1Q5TGY3 1603 aaPredicted RBP36.05■■■■□ 3.36
UFD1-204ENST00000447868 POGKQ9P215 609 aa36.05■■■■□ 3.36
UFD1-204ENST00000447868 COL16A1Q07092 1604 aaPredicted RBP36.04■■■■□ 3.36
UFD1-204ENST00000447868 KIAA1210Q9ULL0 1709 aa36.03■■■■□ 3.36
UFD1-204ENST00000447868 MED1Q15648 1581 aaPredicted RBP36.03■■■■□ 3.36
UFD1-204ENST00000447868 NUTM2FA1L443 756 aa36■■■■□ 3.35
UFD1-204ENST00000447868 ORAI2Q96SN7 254 aa36■■■■□ 3.35
UFD1-204ENST00000447868 DDX17Q92841 729 aaKnown RBP35.98■■■■□ 3.35
UFD1-204ENST00000447868 NHSL1Q5SYE7 1610 aa35.97■■■■□ 3.35
UFD1-204ENST00000447868 NBPF1Q3BBV0 1214 aa35.97■■■■□ 3.35
UFD1-204ENST00000447868 FMN2Q9NZ56 1722 aa35.96■■■■□ 3.35
UFD1-204ENST00000447868 JCADQ9P266 1359 aa35.94■■■■□ 3.34
UFD1-204ENST00000447868 ESCO1Q5FWF5 840 aa35.94■■■■□ 3.34
UFD1-204ENST00000447868 ARHGEF28Q8N1W1 1705 aaKnown RBP35.94■■■■□ 3.34
UFD1-204ENST00000447868 MINK1Q8N4C8 1332 aaPredicted RBP35.9■■■■□ 3.34
UFD1-204ENST00000447868 HIRIP3Q9BW71 556 aaPredicted RBP35.9■■■■□ 3.34
UFD1-204ENST00000447868 TONSLQ96HA7 1378 aa35.89■■■■□ 3.34
UFD1-204ENST00000447868 ADGRB2O60241 1585 aa35.86■■■■□ 3.33
UFD1-204ENST00000447868 TRPM1Q7Z4N2 1603 aa35.85■■■■□ 3.33
UFD1-204ENST00000447868 PHF23Q9BUL5 403 aaPredicted RBP35.84■■■■□ 3.33
UFD1-204ENST00000447868 RGPD8O14715 1765 aaPredicted RBP35.84■■■■□ 3.33
UFD1-204ENST00000447868 SHPRHQ149N8 1683 aa35.82■■■■□ 3.33
UFD1-204ENST00000447868 LRRC59Q96AG4 307 aaKnown RBP35.82■■■■□ 3.32
UFD1-204ENST00000447868 NBPF8Q3BBV2 869 aa35.8■■■■□ 3.32
UFD1-204ENST00000447868 FOXO3O43524 673 aa35.79■■■■□ 3.32
UFD1-204ENST00000447868 SOS2Q07890 1332 aaPredicted RBP35.78■■■■□ 3.32
UFD1-204ENST00000447868 NPHP3Q7Z494 1330 aa35.78■■■■□ 3.32
UFD1-204ENST00000447868 ROCK2O75116 1388 aaKnown RBP35.77■■■■□ 3.32
UFD1-204ENST00000447868 WASLO00401 505 aaPredicted RBP35.76■■■■□ 3.32
UFD1-204ENST00000447868 XPCQ01831 940 aaPredicted RBP35.76■■■■□ 3.32
UFD1-204ENST00000447868 SPATA31A6Q5VVP1 1343 aa35.76■■■■□ 3.31
UFD1-204ENST00000447868 USP32Q8NFA0 1604 aa35.75■■■■□ 3.31
UFD1-204ENST00000447868 KIF1AQ12756 1690 aa35.75■■■■□ 3.31
UFD1-204ENST00000447868 ANKARQ7Z5J8 1434 aa35.74■■■■□ 3.31
UFD1-204ENST00000447868 PHF8Q9UPP1 1060 aa35.73■■■■□ 3.31
UFD1-204ENST00000447868 EIF3AQ14152 1382 aaKnown RBP35.72■■■■□ 3.31
UFD1-204ENST00000447868 NUTM2BA6NNL0 878 aaPredicted RBP35.71■■■■□ 3.31
UFD1-204ENST00000447868 NUTM2EB1AL46 878 aaPredicted RBP35.71■■■■□ 3.31
UFD1-204ENST00000447868 ILDR2Q71H61 639 aa35.71■■■■□ 3.31
UFD1-204ENST00000447868 NUTM2AQ8IVF1 878 aaPredicted RBP35.71■■■■□ 3.31
UFD1-204ENST00000447868 PNPLA6Q8IY17 1366 aa35.71■■■■□ 3.31
UFD1-204ENST00000447868 PXDNQ92626 1479 aa35.71■■■■□ 3.31
UFD1-204ENST00000447868 LRP6O75581 1613 aa35.71■■■■□ 3.31
UFD1-204ENST00000447868 CENPJQ9HC77 1338 aaPredicted RBP35.7■■■■□ 3.31
UFD1-204ENST00000447868 TULP4Q9NRJ4 1543 aa35.7■■■■□ 3.31
UFD1-204ENST00000447868 PRR36Q9H6K5 1346 aa35.68■■■■□ 3.3
UFD1-204ENST00000447868 MEX3CQ5U5Q3 659 aaKnown RBP35.67■■■■□ 3.3
UFD1-204ENST00000447868 PMFBP1Q8TBY8 1022 aa35.67■■■■□ 3.3
UFD1-204ENST00000447868 CDK19Q9BWU1 502 aa35.66■■■■□ 3.3
UFD1-204ENST00000447868 QRICH2Q9H0J4 1663 aa35.65■■■■□ 3.3
UFD1-204ENST00000447868 KRT28Q7Z3Y7 464 aa35.63■■■■□ 3.29
UFD1-204ENST00000447868 RGS17Q9UGC6 210 aaPredicted RBP35.62■■■■□ 3.29
UFD1-204ENST00000447868 GPRASP1Q5JY77 1395 aa35.62■■■■□ 3.29
UFD1-204ENST00000447868 RALGAPBQ86X10 1494 aa35.6■■■■□ 3.29
UFD1-204ENST00000447868 NUDT16Q96DE0 195 aaKnown RBP35.6■■■■□ 3.29
UFD1-204ENST00000447868 CARD11Q9BXL7 1154 aa35.6■■■■□ 3.29
UFD1-204ENST00000447868 CLSPNQ9HAW4 1339 aa35.59■■■■□ 3.29
UFD1-204ENST00000447868 PSME1Q06323 249 aa35.59■■■■□ 3.29
UFD1-204ENST00000447868 ATP7BP35670 1465 aa35.59■■■■□ 3.29
UFD1-204ENST00000447868 CCER1Q8TC90 406 aaPredicted RBP35.58■■■■□ 3.29
UFD1-204ENST00000447868 ITSN1Q15811 1721 aa35.57■■■■□ 3.28
UFD1-204ENST00000447868 COL22A1Q8NFW1 1626 aaPredicted RBP35.54■■■■□ 3.28
UFD1-204ENST00000447868 SRPK2P78362 688 aaKnown RBP35.54■■■■□ 3.28
UFD1-204ENST00000447868 SPATA31A3Q5VYP0 1347 aa35.54■■■■□ 3.28
UFD1-204ENST00000447868 NGDNQ8NEJ9 315 aaKnown RBP35.53■■■■□ 3.28
UFD1-204ENST00000447868 ADAMTS2O95450 1211 aa35.51■■■■□ 3.28
UFD1-204ENST00000447868 CABP2Q9NPB3 220 aa35.51■■■■□ 3.28
UFD1-204ENST00000447868 TOPAZ1Q8N9V7 1692 aa35.49■■■■□ 3.27
UFD1-204ENST00000447868 TNS3Q68CZ2 1445 aa35.49■■■■□ 3.27
UFD1-204ENST00000447868 LMOD2Q6P5Q4 547 aa35.48■■■■□ 3.27
UFD1-204ENST00000447868 CCDC61Q9Y6R9 512 aa35.48■■■■□ 3.27
UFD1-204ENST00000447868 SBNO1A3KN83 1393 aa35.48■■■■□ 3.27
UFD1-204ENST00000447868 POTEAQ6S8J7 498 aa35.47■■■■□ 3.27
UFD1-204ENST00000447868 C8orf37Q96NL8 207 aa35.47■■■■□ 3.27
UFD1-204ENST00000447868 EVC2Q86UK5 1308 aa35.46■■■■□ 3.27
UFD1-204ENST00000447868 TIMELESSQ9UNS1 1208 aa35.44■■■■□ 3.26
UFD1-204ENST00000447868 TRPM3Q9HCF6 1732 aaPredicted RBP35.43■■■■□ 3.26
UFD1-204ENST00000447868 PLEKHG5O94827 1062 aa35.43■■■■□ 3.26
UFD1-204ENST00000447868 AFF2P51816 1311 aa35.41■■■■□ 3.26
UFD1-204ENST00000447868 PPIP5K1Q6PFW1 1433 aa35.4■■■■□ 3.26
UFD1-204ENST00000447868 ACEP12821 1306 aa35.4■■■■□ 3.26
UFD1-204ENST00000447868 ZNF772Q68DY9 489 aaPredicted RBP35.4■■■■□ 3.26
UFD1-204ENST00000447868 ARHGEF10O15013 1369 aa35.39■■■■□ 3.26
UFD1-204ENST00000447868 PLEKHG3A1L390 1219 aa35.39■■■■□ 3.26
UFD1-204ENST00000447868 PAK3O75914 559 aaPredicted RBP35.39■■■■□ 3.26
UFD1-204ENST00000447868 NGLY1Q96IV0 654 aa35.38■■■■□ 3.25
UFD1-204ENST00000447868 POLR3AO14802 1390 aaPredicted RBP35.37■■■■□ 3.25
UFD1-204ENST00000447868 CABLES1Q8TDN4 633 aa35.36■■■■□ 3.25
UFD1-204ENST00000447868 HAP1P54257 671 aaPredicted RBP35.35■■■■□ 3.25
UFD1-204ENST00000447868 ALS2Q96Q42 1657 aa35.35■■■■□ 3.25
UFD1-204ENST00000447868 MARF1Q9Y4F3 1742 aaKnown RBP35.33■■■■□ 3.25
UFD1-204ENST00000447868 CABP1Q9NZU7 370 aa35.33■■■■□ 3.25
UFD1-204ENST00000447868 SBNO2Q9Y2G9 1366 aa35.33■■■■□ 3.25
UFD1-204ENST00000447868 ABCA3Q99758 1704 aa35.29■■■■□ 3.24
UFD1-204ENST00000447868 ST20-MTHFSA0A0A6YYL1 179 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms