RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ABCC11Q96J66 1382 aa34.55■■■■□ 3.12
C9orf3-207ENST00000445181 WAPLQ7Z5K2 1190 aa34.55■■■■□ 3.12
C9orf3-207ENST00000445181 YTHDC2Q9H6S0 1430 aaKnown RBP34.55■■■■□ 3.12
C9orf3-207ENST00000445181 DDX17Q92841 729 aaKnown RBP34.54■■■■□ 3.12
C9orf3-207ENST00000445181 TECPR2O15040 1411 aa34.54■■■■□ 3.12
C9orf3-207ENST00000445181 L3MBTL2Q969R5 705 aa34.53■■■■□ 3.12
C9orf3-207ENST00000445181 NHSL1Q5SYE7 1610 aa34.52■■■■□ 3.12
C9orf3-207ENST00000445181 ORAI2Q96SN7 254 aa34.51■■■■□ 3.12
C9orf3-207ENST00000445181 LRRC59Q96AG4 307 aaKnown RBP34.5■■■■□ 3.11
C9orf3-207ENST00000445181 SHPRHQ149N8 1683 aa34.5■■■■□ 3.11
C9orf3-207ENST00000445181 POTEAQ6S8J7 498 aa34.48■■■■□ 3.11
C9orf3-207ENST00000445181 KNDC1Q76NI1 1749 aa34.47■■■■□ 3.11
C9orf3-207ENST00000445181 MEX3CQ5U5Q3 659 aaKnown RBP34.47■■■■□ 3.11
C9orf3-207ENST00000445181 LRP6O75581 1613 aa34.47■■■■□ 3.11
C9orf3-207ENST00000445181 PLEKHH1Q9ULM0 1364 aa34.46■■■■□ 3.11
C9orf3-207ENST00000445181 NUTM2BA6NNL0 878 aaPredicted RBP34.44■■■■□ 3.1
C9orf3-207ENST00000445181 NUTM2EB1AL46 878 aaPredicted RBP34.44■■■■□ 3.1
C9orf3-207ENST00000445181 NUTM2AQ8IVF1 878 aaPredicted RBP34.44■■■■□ 3.1
C9orf3-207ENST00000445181 ADGRB1O14514 1584 aa34.44■■■■□ 3.1
C9orf3-207ENST00000445181 CDC42BPGQ6DT37 1551 aa34.44■■■■□ 3.1
C9orf3-207ENST00000445181 SIRT1Q96EB6 747 aa34.43■■■■□ 3.1
C9orf3-207ENST00000445181 TONSLQ96HA7 1378 aa34.42■■■■□ 3.1
C9orf3-207ENST00000445181 ESCO1Q5FWF5 840 aa34.4■■■■□ 3.1
C9orf3-207ENST00000445181 TRAK1Q9UPV9 953 aa34.4■■■■□ 3.1
C9orf3-207ENST00000445181 NUTM2FA1L443 756 aa34.38■■■■□ 3.09
C9orf3-207ENST00000445181 SOS2Q07890 1332 aaPredicted RBP34.37■■■■□ 3.09
C9orf3-207ENST00000445181 POGKQ9P215 609 aa34.37■■■■□ 3.09
C9orf3-207ENST00000445181 PNPLA6Q8IY17 1366 aa34.36■■■■□ 3.09
C9orf3-207ENST00000445181 KIAA1210Q9ULL0 1709 aa34.36■■■■□ 3.09
C9orf3-207ENST00000445181 PRAM1Q96QH2 718 aa34.36■■■■□ 3.09
C9orf3-207ENST00000445181 SAFB2Q14151 953 aaKnown RBP eCLIP34.34■■■■□ 3.09
C9orf3-207ENST00000445181 DLC1Q96QB1 1528 aa34.34■■■■□ 3.09
C9orf3-207ENST00000445181 NBPF1Q3BBV0 1214 aa34.32■■■■□ 3.08
C9orf3-207ENST00000445181 ZNF772Q68DY9 489 aaPredicted RBP34.31■■■■□ 3.08
C9orf3-207ENST00000445181 NPHP3Q7Z494 1330 aa34.3■■■■□ 3.08
C9orf3-207ENST00000445181 FOXO3O43524 673 aa34.29■■■■□ 3.08
C9orf3-207ENST00000445181 CCER1Q8TC90 406 aaPredicted RBP34.28■■■■□ 3.08
C9orf3-207ENST00000445181 CLSPNQ9HAW4 1339 aa34.27■■■■□ 3.08
C9orf3-207ENST00000445181 FMN2Q9NZ56 1722 aa34.25■■■■□ 3.07
C9orf3-207ENST00000445181 XPCQ01831 940 aaPredicted RBP34.24■■■■□ 3.07
C9orf3-207ENST00000445181 TRPM1Q7Z4N2 1603 aa34.22■■■■□ 3.07
C9orf3-207ENST00000445181 C8orf37Q96NL8 207 aa34.21■■■■□ 3.07
C9orf3-207ENST00000445181 AFF2P51816 1311 aa34.21■■■■□ 3.07
C9orf3-207ENST00000445181 ROCK2O75116 1388 aaKnown RBP34.21■■■■□ 3.07
C9orf3-207ENST00000445181 PXDNQ92626 1479 aa34.2■■■■□ 3.07
C9orf3-207ENST00000445181 ADAMTS2O95450 1211 aa34.2■■■■□ 3.07
C9orf3-207ENST00000445181 NBPF8Q3BBV2 869 aa34.2■■■■□ 3.07
C9orf3-207ENST00000445181 ARHGEF28Q8N1W1 1705 aaKnown RBP34.2■■■■□ 3.07
C9orf3-207ENST00000445181 MINK1Q8N4C8 1332 aaPredicted RBP34.19■■■■□ 3.06
C9orf3-207ENST00000445181 HIRIP3Q9BW71 556 aaPredicted RBP34.17■■■■□ 3.06
C9orf3-207ENST00000445181 NGLY1Q96IV0 654 aa34.14■■■■□ 3.06
C9orf3-207ENST00000445181 PHF8Q9UPP1 1060 aa34.14■■■■□ 3.06
C9orf3-207ENST00000445181 KIF1AQ12756 1690 aa34.12■■■■□ 3.05
C9orf3-207ENST00000445181 RXRBP28702 533 aa34.12■■■■□ 3.05
C9orf3-207ENST00000445181 KRT28Q7Z3Y7 464 aa34.12■■■■□ 3.05
C9orf3-207ENST00000445181 RGPD8O14715 1765 aaPredicted RBP34.11■■■■□ 3.05
C9orf3-207ENST00000445181 ADGRB2O60241 1585 aa34.11■■■■□ 3.05
C9orf3-207ENST00000445181 COL22A1Q8NFW1 1626 aaPredicted RBP34.1■■■■□ 3.05
C9orf3-207ENST00000445181 CENPJQ9HC77 1338 aaPredicted RBP34.07■■■■□ 3.05
C9orf3-207ENST00000445181 QTRT2Q9H974 415 aaKnown RBP34.07■■■■□ 3.04
C9orf3-207ENST00000445181 TIMELESSQ9UNS1 1208 aa34.07■■■■□ 3.04
C9orf3-207ENST00000445181 SPATA31A3Q5VYP0 1347 aa34.06■■■■□ 3.04
C9orf3-207ENST00000445181 ANKARQ7Z5J8 1434 aa34.06■■■■□ 3.04
C9orf3-207ENST00000445181 CARD11Q9BXL7 1154 aa34.06■■■■□ 3.04
C9orf3-207ENST00000445181 WASLO00401 505 aaPredicted RBP34.05■■■■□ 3.04
C9orf3-207ENST00000445181 PSME1Q06323 249 aa34.05■■■■□ 3.04
C9orf3-207ENST00000445181 RALGAPBQ86X10 1494 aa34.05■■■■□ 3.04
C9orf3-207ENST00000445181 EIF3AQ14152 1382 aaKnown RBP34.04■■■■□ 3.04
C9orf3-207ENST00000445181 GPRASP1Q5JY77 1395 aa34.03■■■■□ 3.04
C9orf3-207ENST00000445181 PMFBP1Q8TBY8 1022 aa34.03■■■■□ 3.04
C9orf3-207ENST00000445181 USP32Q8NFA0 1604 aa34.01■■■■□ 3.04
C9orf3-207ENST00000445181 USP21Q9UK80 565 aa34■■■■□ 3.03
C9orf3-207ENST00000445181 FNBP4Q8N3X1 1017 aaPredicted RBP33.99■■■■□ 3.03
C9orf3-207ENST00000445181 PRR36Q9H6K5 1346 aa33.99■■■■□ 3.03
C9orf3-207ENST00000445181 RBM6P78332 1123 aaKnown RBP33.98■■■■□ 3.03
C9orf3-207ENST00000445181 QRICH2Q9H0J4 1663 aa33.98■■■■□ 3.03
C9orf3-207ENST00000445181 CDK19Q9BWU1 502 aa33.97■■■■□ 3.03
C9orf3-207ENST00000445181 TULP4Q9NRJ4 1543 aa33.97■■■■□ 3.03
C9orf3-207ENST00000445181 TNS3Q68CZ2 1445 aa33.96■■■■□ 3.03
C9orf3-207ENST00000445181 CDK12Q9NYV4 1490 aaPredicted RBP33.95■■■■□ 3.03
C9orf3-207ENST00000445181 SBNO1A3KN83 1393 aa33.95■■■■□ 3.02
C9orf3-207ENST00000445181 LMOD2Q6P5Q4 547 aa33.93■■■■□ 3.02
C9orf3-207ENST00000445181 TRPC5Q9UL62 973 aaPredicted RBP33.92■■■■□ 3.02
C9orf3-207ENST00000445181 PLEKHG5O94827 1062 aa33.9■■■■□ 3.02
C9orf3-207ENST00000445181 SRPK2P78362 688 aaKnown RBP33.9■■■■□ 3.02
C9orf3-207ENST00000445181 NUDT16Q96DE0 195 aaKnown RBP33.9■■■■□ 3.02
C9orf3-207ENST00000445181 HAP1P54257 671 aaPredicted RBP33.89■■■■□ 3.02
C9orf3-207ENST00000445181 CABLES1Q8TDN4 633 aa33.89■■■■□ 3.02
C9orf3-207ENST00000445181 MARF1Q9Y4F3 1742 aaKnown RBP33.88■■■■□ 3.01
C9orf3-207ENST00000445181 ARHGEF10O15013 1369 aa33.87■■■■□ 3.01
C9orf3-207ENST00000445181 NGDNQ8NEJ9 315 aaKnown RBP33.87■■■■□ 3.01
C9orf3-207ENST00000445181 ATP7BP35670 1465 aa33.86■■■■□ 3.01
C9orf3-207ENST00000445181 EVC2Q86UK5 1308 aa33.85■■■■□ 3.01
C9orf3-207ENST00000445181 BCL9LQ86UU0 1499 aa33.85■■■■□ 3.01
C9orf3-207ENST00000445181 RGS12O14924 1447 aa33.85■■■■□ 3.01
C9orf3-207ENST00000445181 ATRNO75882 1429 aa33.85■■■■□ 3.01
C9orf3-207ENST00000445181 CABP2Q9NPB3 220 aa33.84■■■■□ 3.01
C9orf3-207ENST00000445181 ITSN1Q15811 1721 aa33.83■■■■□ 3.01
C9orf3-207ENST00000445181 UPF1Q92900 1129 aaKnown RBP eCLIP33.81■■■■□ 3
C9orf3-207ENST00000445181 CCDC61Q9Y6R9 512 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms