RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 UBR1Q8IWV7 1749 aa8.04□□□□□ -1.12
CBX1-204ENST00000444685 BMP2KQ9NSY1 1161 aaPredicted RBP8.04□□□□□ -1.12
CBX1-204ENST00000444685 ZC3H13Q5T200 1668 aaKnown RBP8.04□□□□□ -1.12
CBX1-204ENST00000444685 ARHGAP31Q2M1Z3 1444 aa8.03□□□□□ -1.12
CBX1-204ENST00000444685 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.03□□□□□ -1.12
CBX1-204ENST00000444685 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
CBX1-204ENST00000444685 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
CBX1-204ENST00000444685 NGLY1Q96IV0 654 aa8.03□□□□□ -1.12
CBX1-204ENST00000444685 QTRT2Q9H974 415 aaKnown RBP8.03□□□□□ -1.12
CBX1-204ENST00000444685 PHLPP1O60346 1717 aa8.03□□□□□ -1.12
CBX1-204ENST00000444685 FGD6Q6ZV73 1430 aa8.03□□□□□ -1.12
CBX1-204ENST00000444685 ARHGEF5Q12774 1597 aa8.02□□□□□ -1.13
CBX1-204ENST00000444685 RBM6P78332 1123 aaKnown RBP8.02□□□□□ -1.13
CBX1-204ENST00000444685 LRRC59Q96AG4 307 aaKnown RBP8.02□□□□□ -1.13
CBX1-204ENST00000444685 PRDM15P57071 1507 aaPredicted RBP8.02□□□□□ -1.13
CBX1-204ENST00000444685 XIRP1Q702N8 1843 aaKnown RBP8.01□□□□□ -1.13
CBX1-204ENST00000444685 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
CBX1-204ENST00000444685 TBX22Q9Y458 520 aa8.01□□□□□ -1.13
CBX1-204ENST00000444685 AFF2P51816 1311 aa8.01□□□□□ -1.13
CBX1-204ENST00000444685 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
CBX1-204ENST00000444685 SETD1AO15047 1707 aaKnown RBP8□□□□□ -1.13
CBX1-204ENST00000444685 NKTRP30414 1462 aaKnown RBP8□□□□□ -1.13
CBX1-204ENST00000444685 KIF15Q9NS87 1388 aa8□□□□□ -1.13
CBX1-204ENST00000444685 EFCAB6Q5THR3 1501 aa8□□□□□ -1.13
CBX1-204ENST00000444685 DUOX2Q9NRD8 1548 aa8□□□□□ -1.13
CBX1-204ENST00000444685 C8orf37Q96NL8 207 aa8□□□□□ -1.13
CBX1-204ENST00000444685 MYOM3Q5VTT5 1437 aa8□□□□□ -1.13
CBX1-204ENST00000444685 NCOA3Q9Y6Q9 1424 aa8□□□□□ -1.13
CBX1-204ENST00000444685 EIF2AK4Q9P2K8 1649 aaKnown RBP8□□□□□ -1.13
CBX1-204ENST00000444685 SNPHO15079 494 aa7.99□□□□□ -1.13
CBX1-204ENST00000444685 MIER1Q8N108 512 aa7.99□□□□□ -1.13
CBX1-204ENST00000444685 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
CBX1-204ENST00000444685 ECM2O94769 699 aaPredicted RBP7.98□□□□□ -1.13
CBX1-204ENST00000444685 EMP3P54852 163 aa7.98□□□□□ -1.13
CBX1-204ENST00000444685 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
CBX1-204ENST00000444685 PLCD3Q8N3E9 789 aa7.98□□□□□ -1.13
CBX1-204ENST00000444685 CHIC2Q9UKJ5 165 aa7.98□□□□□ -1.13
CBX1-204ENST00000444685 CDK12Q9NYV4 1490 aaPredicted RBP7.98□□□□□ -1.13
CBX1-204ENST00000444685 TET3O43151 1660 aa7.98□□□□□ -1.13
CBX1-204ENST00000444685 CEP152O94986 1710 aa7.98□□□□□ -1.13
CBX1-204ENST00000444685 ERBINQ96RT1 1412 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 PIK3C2BO00750 1634 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 BRINP3Q76B58 766 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 TRPC6Q9Y210 931 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 AMOTL2Q9Y2J4 779 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 MAP3K1Q13233 1512 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 MAST1Q9Y2H9 1570 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 ANKRD30AQ9BXX3 1397 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 PLEKHG1Q9ULL1 1385 aa7.97□□□□□ -1.13
CBX1-204ENST00000444685 ADAMTS2O95450 1211 aa7.96□□□□□ -1.14
CBX1-204ENST00000444685 ATAD2Q6PL18 1390 aa7.96□□□□□ -1.14
CBX1-204ENST00000444685 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
CBX1-204ENST00000444685 USP21Q9UK80 565 aa7.95□□□□□ -1.14
CBX1-204ENST00000444685 LRP6O75581 1613 aa7.95□□□□□ -1.14
CBX1-204ENST00000444685 KDM5AP29375 1690 aaKnown RBP7.95□□□□□ -1.14
CBX1-204ENST00000444685 RIMS2Q9UQ26 1411 aa7.95□□□□□ -1.14
CBX1-204ENST00000444685 KANK4Q5T7N3 995 aaPredicted RBP7.94□□□□□ -1.14
CBX1-204ENST00000444685 VSIG10Q8N0Z9 540 aa7.94□□□□□ -1.14
CBX1-204ENST00000444685 TRPC5Q9UL62 973 aaPredicted RBP7.94□□□□□ -1.14
CBX1-204ENST00000444685 PIK3R4Q99570 1358 aa7.94□□□□□ -1.14
CBX1-204ENST00000444685 COL16A1Q07092 1604 aaPredicted RBP7.93□□□□□ -1.14
CBX1-204ENST00000444685 MROH1Q8NDA8 1641 aa7.93□□□□□ -1.14
CBX1-204ENST00000444685 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
CBX1-204ENST00000444685 BBXQ8WY36 941 aaPredicted RBP7.93□□□□□ -1.14
CBX1-204ENST00000444685 CHD2O14647 1828 aaKnown RBP7.92□□□□□ -1.14
CBX1-204ENST00000444685 PAXIP1Q6ZW49 1069 aaPredicted RBP7.92□□□□□ -1.14
CBX1-204ENST00000444685 ABCC5O15440 1437 aa7.92□□□□□ -1.14
CBX1-204ENST00000444685 NOS1P29475 1434 aa7.92□□□□□ -1.14
CBX1-204ENST00000444685 NWD1Q149M9 1564 aa7.92□□□□□ -1.14
CBX1-204ENST00000444685 RGL2O15211 777 aa7.91□□□□□ -1.14
CBX1-204ENST00000444685 ZNF326Q5BKZ1 582 aaKnown RBP7.91□□□□□ -1.14
CBX1-204ENST00000444685 CFAP44Q96MT7 982 aa7.91□□□□□ -1.14
CBX1-204ENST00000444685 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.91□□□□□ -1.14
CBX1-204ENST00000444685 KDM2AQ9Y2K7 1162 aa7.91□□□□□ -1.14
CBX1-204ENST00000444685 SETD5Q9C0A6 1442 aa7.91□□□□□ -1.14
CBX1-204ENST00000444685 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
CBX1-204ENST00000444685 AHDC1Q5TGY3 1603 aaPredicted RBP7.91□□□□□ -1.14
CBX1-204ENST00000444685 SHPRHQ149N8 1683 aa7.91□□□□□ -1.14
CBX1-204ENST00000444685 LMTK2Q8IWU2 1503 aa7.9□□□□□ -1.14
CBX1-204ENST00000444685 TIE1P35590 1138 aa7.9□□□□□ -1.14
CBX1-204ENST00000444685 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.89□□□□□ -1.15
CBX1-204ENST00000444685 RPRD2Q5VT52 1461 aaKnown RBP7.89□□□□□ -1.15
CBX1-204ENST00000444685 RGS12O14924 1447 aa7.89□□□□□ -1.15
CBX1-204ENST00000444685 ZFYVE9O95405 1425 aa7.89□□□□□ -1.15
CBX1-204ENST00000444685 PRKCSHP14314 528 aaPredicted RBP7.89□□□□□ -1.15
CBX1-204ENST00000444685 FAM50AQ14320 339 aaKnown RBP7.89□□□□□ -1.15
CBX1-204ENST00000444685 DDX17Q92841 729 aaKnown RBP7.89□□□□□ -1.15
CBX1-204ENST00000444685 DCCP43146 1447 aa7.88□□□□□ -1.15
CBX1-204ENST00000444685 DAPK1P53355 1430 aa7.88□□□□□ -1.15
CBX1-204ENST00000444685 FNBP4Q8N3X1 1017 aaPredicted RBP7.88□□□□□ -1.15
CBX1-204ENST00000444685 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
CBX1-204ENST00000444685 VPS8Q8N3P4 1428 aa7.87□□□□□ -1.15
CBX1-204ENST00000444685 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
CBX1-204ENST00000444685 MNX1P50219 401 aaPredicted RBP7.86□□□□□ -1.15
CBX1-204ENST00000444685 IER5LQ5T953 404 aa7.86□□□□□ -1.15
CBX1-204ENST00000444685 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
CBX1-204ENST00000444685 TRPM2O94759 1503 aa7.86□□□□□ -1.15
CBX1-204ENST00000444685 ASXL1Q8IXJ9 1541 aa7.86□□□□□ -1.15
CBX1-204ENST00000444685 ADAMTS13Q76LX8 1427 aa7.86□□□□□ -1.15
CBX1-204ENST00000444685 ANKRD50Q9ULJ7 1429 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms