RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 HRCP23327 699 aa16.06■□□□□ 0.16
SF3A1-203ENST00000444440 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
SF3A1-203ENST00000444440 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
SF3A1-203ENST00000444440 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
SF3A1-203ENST00000444440 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
SF3A1-203ENST00000444440 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
SF3A1-203ENST00000444440 ARHGEF28Q8N1W1 1705 aaKnown RBP16.04■□□□□ 0.16
SF3A1-203ENST00000444440 POTEAQ6S8J7 498 aa16.03■□□□□ 0.16
SF3A1-203ENST00000444440 USP32Q8NFA0 1604 aa16.03■□□□□ 0.16
SF3A1-203ENST00000444440 DHX57Q6P158 1386 aaKnown RBP16.02■□□□□ 0.16
SF3A1-203ENST00000444440 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
SF3A1-203ENST00000444440 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
SF3A1-203ENST00000444440 DLC1Q96QB1 1528 aa16■□□□□ 0.15
SF3A1-203ENST00000444440 KIF1AQ12756 1690 aa16■□□□□ 0.15
SF3A1-203ENST00000444440 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
SF3A1-203ENST00000444440 SPATA31A6Q5VVP1 1343 aa15.99■□□□□ 0.15
SF3A1-203ENST00000444440 PXDNQ92626 1479 aa15.99■□□□□ 0.15
SF3A1-203ENST00000444440 ADGRB2O60241 1585 aa15.99■□□□□ 0.15
SF3A1-203ENST00000444440 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
SF3A1-203ENST00000444440 KDM2AQ9Y2K7 1162 aa15.98■□□□□ 0.15
SF3A1-203ENST00000444440 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
SF3A1-203ENST00000444440 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
SF3A1-203ENST00000444440 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-203ENST00000444440 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-203ENST00000444440 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-203ENST00000444440 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-203ENST00000444440 ABCA3Q99758 1704 aa15.95■□□□□ 0.14
SF3A1-203ENST00000444440 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
SF3A1-203ENST00000444440 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
SF3A1-203ENST00000444440 SIRT1Q96EB6 747 aa15.94■□□□□ 0.14
SF3A1-203ENST00000444440 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
SF3A1-203ENST00000444440 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
SF3A1-203ENST00000444440 TRPM3Q9HCF6 1732 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-203ENST00000444440 XPCQ01831 940 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-203ENST00000444440 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
SF3A1-203ENST00000444440 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
SF3A1-203ENST00000444440 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
SF3A1-203ENST00000444440 FOXO3O43524 673 aa15.89■□□□□ 0.13
SF3A1-203ENST00000444440 TRPM1Q7Z4N2 1603 aa15.89■□□□□ 0.13
SF3A1-203ENST00000444440 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
SF3A1-203ENST00000444440 TOPAZ1Q8N9V7 1692 aa15.88■□□□□ 0.13
SF3A1-203ENST00000444440 ALS2Q96Q42 1657 aa15.88■□□□□ 0.13
SF3A1-203ENST00000444440 AFF2P51816 1311 aa15.88■□□□□ 0.13
SF3A1-203ENST00000444440 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
SF3A1-203ENST00000444440 QRICH2Q9H0J4 1663 aa15.87■□□□□ 0.13
SF3A1-203ENST00000444440 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
SF3A1-203ENST00000444440 TULP4Q9NRJ4 1543 aa15.87■□□□□ 0.13
SF3A1-203ENST00000444440 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-203ENST00000444440 ADAMTS2O95450 1211 aa15.85■□□□□ 0.13
SF3A1-203ENST00000444440 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
SF3A1-203ENST00000444440 C8orf37Q96NL8 207 aa15.85■□□□□ 0.13
SF3A1-203ENST00000444440 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
SF3A1-203ENST00000444440 POGKQ9P215 609 aa15.85■□□□□ 0.13
SF3A1-203ENST00000444440 PRR36Q9H6K5 1346 aa15.85■□□□□ 0.13
SF3A1-203ENST00000444440 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.85■□□□□ 0.13
SF3A1-203ENST00000444440 PLCH1Q4KWH8 1693 aa15.84■□□□□ 0.13
SF3A1-203ENST00000444440 NBPF1Q3BBV0 1214 aa15.84■□□□□ 0.13
SF3A1-203ENST00000444440 ANKARQ7Z5J8 1434 aa15.84■□□□□ 0.13
SF3A1-203ENST00000444440 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
SF3A1-203ENST00000444440 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.12
SF3A1-203ENST00000444440 SPATA31A3Q5VYP0 1347 aa15.82■□□□□ 0.12
SF3A1-203ENST00000444440 ATP7BP35670 1465 aa15.82■□□□□ 0.12
SF3A1-203ENST00000444440 TNS3Q68CZ2 1445 aa15.81■□□□□ 0.12
SF3A1-203ENST00000444440 KRT28Q7Z3Y7 464 aa15.81■□□□□ 0.12
SF3A1-203ENST00000444440 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
SF3A1-203ENST00000444440 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
SF3A1-203ENST00000444440 RGS12O14924 1447 aa15.79■□□□□ 0.12
SF3A1-203ENST00000444440 BRWD3Q6RI45 1802 aa15.79■□□□□ 0.12
SF3A1-203ENST00000444440 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
SF3A1-203ENST00000444440 NRAPQ86VF7 1730 aa15.78■□□□□ 0.12
SF3A1-203ENST00000444440 NWD2Q9ULI1 1742 aa15.78■□□□□ 0.12
SF3A1-203ENST00000444440 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
SF3A1-203ENST00000444440 EP400Q96L91 3159 aa15.78■□□□□ 0.12
SF3A1-203ENST00000444440 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
SF3A1-203ENST00000444440 PHRF1Q9P1Y6 1649 aaKnown RBP15.77■□□□□ 0.12
SF3A1-203ENST00000444440 NGLY1Q96IV0 654 aa15.77■□□□□ 0.12
SF3A1-203ENST00000444440 SBNO1A3KN83 1393 aa15.76■□□□□ 0.11
SF3A1-203ENST00000444440 RXRBP28702 533 aa15.76■□□□□ 0.11
SF3A1-203ENST00000444440 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
SF3A1-203ENST00000444440 QTRT2Q9H974 415 aaKnown RBP15.76■□□□□ 0.11
SF3A1-203ENST00000444440 ATRNO75882 1429 aa15.76■□□□□ 0.11
SF3A1-203ENST00000444440 GLI3P10071 1580 aa15.75■□□□□ 0.11
SF3A1-203ENST00000444440 SLIT2O94813 1529 aa15.75■□□□□ 0.11
SF3A1-203ENST00000444440 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
SF3A1-203ENST00000444440 CABLES1Q8TDN4 633 aa15.75■□□□□ 0.11
SF3A1-203ENST00000444440 USP21Q9UK80 565 aa15.74■□□□□ 0.11
SF3A1-203ENST00000444440 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
SF3A1-203ENST00000444440 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
SF3A1-203ENST00000444440 PSME1Q06323 249 aa15.72■□□□□ 0.11
SF3A1-203ENST00000444440 NUDT16Q96DE0 195 aaKnown RBP15.72■□□□□ 0.11
SF3A1-203ENST00000444440 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
SF3A1-203ENST00000444440 AKAP12Q02952 1782 aa15.72■□□□□ 0.11
SF3A1-203ENST00000444440 RBM6P78332 1123 aaKnown RBP15.71■□□□□ 0.11
SF3A1-203ENST00000444440 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
SF3A1-203ENST00000444440 COL14A1Q05707 1796 aaKnown RBP15.7■□□□□ 0.1
SF3A1-203ENST00000444440 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
SF3A1-203ENST00000444440 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
SF3A1-203ENST00000444440 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-203ENST00000444440 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
SF3A1-203ENST00000444440 POLR3AO14802 1390 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms