RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 SAFB2Q14151 953 aaKnown RBP eCLIP24.28■■□□□ 1.48
TSPAN9-204ENST00000444315 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
TSPAN9-204ENST00000444315 STAC3Q96MF2 364 aa24.27■■□□□ 1.48
TSPAN9-204ENST00000444315 NHSL1Q5SYE7 1610 aa24.27■■□□□ 1.48
TSPAN9-204ENST00000444315 ESCO1Q5FWF5 840 aa24.25■■□□□ 1.47
TSPAN9-204ENST00000444315 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
TSPAN9-204ENST00000444315 TRIM26Q12899 539 aaPredicted RBP24.24■■□□□ 1.47
TSPAN9-204ENST00000444315 DDX17Q92841 729 aaKnown RBP24.24■■□□□ 1.47
TSPAN9-204ENST00000444315 PRAM1Q96QH2 718 aa24.24■■□□□ 1.47
TSPAN9-204ENST00000444315 SHPRHQ149N8 1683 aa24.24■■□□□ 1.47
TSPAN9-204ENST00000444315 NUTM2BA6NNL0 878 aaPredicted RBP24.23■■□□□ 1.47
TSPAN9-204ENST00000444315 NUTM2EB1AL46 878 aaPredicted RBP24.23■■□□□ 1.47
TSPAN9-204ENST00000444315 NUTM2AQ8IVF1 878 aaPredicted RBP24.23■■□□□ 1.47
TSPAN9-204ENST00000444315 TRAK1Q9UPV9 953 aa24.23■■□□□ 1.47
TSPAN9-204ENST00000444315 ORAI2Q96SN7 254 aa24.22■■□□□ 1.47
TSPAN9-204ENST00000444315 SPATA31A6Q5VVP1 1343 aa24.21■■□□□ 1.47
TSPAN9-204ENST00000444315 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
TSPAN9-204ENST00000444315 LRRC59Q96AG4 307 aaKnown RBP24.21■■□□□ 1.47
TSPAN9-204ENST00000444315 FMN2Q9NZ56 1722 aa24.18■■□□□ 1.46
TSPAN9-204ENST00000444315 DLC1Q96QB1 1528 aa24.17■■□□□ 1.46
TSPAN9-204ENST00000444315 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
TSPAN9-204ENST00000444315 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
TSPAN9-204ENST00000444315 NPHP3Q7Z494 1330 aa24.15■■□□□ 1.46
TSPAN9-204ENST00000444315 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
TSPAN9-204ENST00000444315 SIN3AQ96ST3 1273 aa24.13■■□□□ 1.45
TSPAN9-204ENST00000444315 HIRIP3Q9BW71 556 aaPredicted RBP24.13■■□□□ 1.45
TSPAN9-204ENST00000444315 KIF1AQ12756 1690 aa24.12■■□□□ 1.45
TSPAN9-204ENST00000444315 KIAA1210Q9ULL0 1709 aa24.11■■□□□ 1.45
TSPAN9-204ENST00000444315 SOCS7O14512 581 aa24.11■■□□□ 1.45
TSPAN9-204ENST00000444315 XPCQ01831 940 aaPredicted RBP24.11■■□□□ 1.45
TSPAN9-204ENST00000444315 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
TSPAN9-204ENST00000444315 LRP6O75581 1613 aa24.1■■□□□ 1.45
TSPAN9-204ENST00000444315 FOXO3O43524 673 aa24.1■■□□□ 1.45
TSPAN9-204ENST00000444315 ARHGEF28Q8N1W1 1705 aaKnown RBP24.1■■□□□ 1.45
TSPAN9-204ENST00000444315 EIF3AQ14152 1382 aaKnown RBP24.08■■□□□ 1.45
TSPAN9-204ENST00000444315 PNPLA6Q8IY17 1366 aa24.08■■□□□ 1.45
TSPAN9-204ENST00000444315 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
TSPAN9-204ENST00000444315 L3MBTL2Q969R5 705 aa24.06■■□□□ 1.44
TSPAN9-204ENST00000444315 PHF8Q9UPP1 1060 aa24.06■■□□□ 1.44
TSPAN9-204ENST00000444315 ADGRB2O60241 1585 aa24.06■■□□□ 1.44
TSPAN9-204ENST00000444315 C8orf37Q96NL8 207 aa24.05■■□□□ 1.44
TSPAN9-204ENST00000444315 ADAMTS2O95450 1211 aa24.04■■□□□ 1.44
TSPAN9-204ENST00000444315 ZNF772Q68DY9 489 aaPredicted RBP24.04■■□□□ 1.44
TSPAN9-204ENST00000444315 RGS17Q9UGC6 210 aaPredicted RBP24.04■■□□□ 1.44
TSPAN9-204ENST00000444315 LMOD2Q6P5Q4 547 aa24.03■■□□□ 1.44
TSPAN9-204ENST00000444315 PLEKHG5O94827 1062 aa24.02■■□□□ 1.44
TSPAN9-204ENST00000444315 HAP1P54257 671 aaPredicted RBP24.02■■□□□ 1.44
TSPAN9-204ENST00000444315 TONSLQ96HA7 1378 aa24.02■■□□□ 1.44
TSPAN9-204ENST00000444315 ANKARQ7Z5J8 1434 aa24.01■■□□□ 1.43
TSPAN9-204ENST00000444315 PSME1Q06323 249 aa24.01■■□□□ 1.43
TSPAN9-204ENST00000444315 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
TSPAN9-204ENST00000444315 PMFBP1Q8TBY8 1022 aa24.01■■□□□ 1.43
TSPAN9-204ENST00000444315 PXDNQ92626 1479 aa24■■□□□ 1.43
TSPAN9-204ENST00000444315 NBPF1Q3BBV0 1214 aa24■■□□□ 1.43
TSPAN9-204ENST00000444315 POTEAQ6S8J7 498 aa24■■□□□ 1.43
TSPAN9-204ENST00000444315 WASLO00401 505 aaPredicted RBP23.99■■□□□ 1.43
TSPAN9-204ENST00000444315 NGLY1Q96IV0 654 aa23.99■■□□□ 1.43
TSPAN9-204ENST00000444315 TULP4Q9NRJ4 1543 aa23.99■■□□□ 1.43
TSPAN9-204ENST00000444315 AFF2P51816 1311 aa23.98■■□□□ 1.43
TSPAN9-204ENST00000444315 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
TSPAN9-204ENST00000444315 ROCK2O75116 1388 aaKnown RBP23.97■■□□□ 1.43
TSPAN9-204ENST00000444315 USP32Q8NFA0 1604 aa23.96■■□□□ 1.43
TSPAN9-204ENST00000444315 NGDNQ8NEJ9 315 aaKnown RBP23.96■■□□□ 1.43
TSPAN9-204ENST00000444315 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.43
TSPAN9-204ENST00000444315 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.43
TSPAN9-204ENST00000444315 GPRASP1Q5JY77 1395 aa23.95■■□□□ 1.42
TSPAN9-204ENST00000444315 CENPJQ9HC77 1338 aaPredicted RBP23.94■■□□□ 1.42
TSPAN9-204ENST00000444315 QRICH2Q9H0J4 1663 aa23.94■■□□□ 1.42
TSPAN9-204ENST00000444315 TNS3Q68CZ2 1445 aa23.93■■□□□ 1.42
TSPAN9-204ENST00000444315 SRPK2P78362 688 aaKnown RBP23.92■■□□□ 1.42
TSPAN9-204ENST00000444315 CDK19Q9BWU1 502 aa23.92■■□□□ 1.42
TSPAN9-204ENST00000444315 SPATA31A3Q5VYP0 1347 aa23.91■■□□□ 1.42
TSPAN9-204ENST00000444315 PAK3O75914 559 aaPredicted RBP23.91■■□□□ 1.42
TSPAN9-204ENST00000444315 RXRBP28702 533 aa23.89■■□□□ 1.41
TSPAN9-204ENST00000444315 NUDT16Q96DE0 195 aaKnown RBP23.89■■□□□ 1.41
TSPAN9-204ENST00000444315 PRR36Q9H6K5 1346 aa23.88■■□□□ 1.41
TSPAN9-204ENST00000444315 MARF1Q9Y4F3 1742 aaKnown RBP23.88■■□□□ 1.41
TSPAN9-204ENST00000444315 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
TSPAN9-204ENST00000444315 ARHGEF10O15013 1369 aa23.88■■□□□ 1.41
TSPAN9-204ENST00000444315 USP21Q9UK80 565 aa23.87■■□□□ 1.41
TSPAN9-204ENST00000444315 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
TSPAN9-204ENST00000444315 ATP7BP35670 1465 aa23.86■■□□□ 1.41
TSPAN9-204ENST00000444315 QTRT2Q9H974 415 aaKnown RBP23.85■■□□□ 1.41
TSPAN9-204ENST00000444315 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.41
TSPAN9-204ENST00000444315 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
TSPAN9-204ENST00000444315 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
TSPAN9-204ENST00000444315 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
TSPAN9-204ENST00000444315 EVC2Q86UK5 1308 aa23.81■■□□□ 1.4
TSPAN9-204ENST00000444315 TOPAZ1Q8N9V7 1692 aa23.8■■□□□ 1.4
TSPAN9-204ENST00000444315 NBPF8Q3BBV2 869 aa23.8■■□□□ 1.4
TSPAN9-204ENST00000444315 TRPM3Q9HCF6 1732 aaPredicted RBP23.8■■□□□ 1.4
TSPAN9-204ENST00000444315 TRPC5Q9UL62 973 aaPredicted RBP23.8■■□□□ 1.4
TSPAN9-204ENST00000444315 RBM6P78332 1123 aaKnown RBP23.79■■□□□ 1.4
TSPAN9-204ENST00000444315 PPIP5K1Q6PFW1 1433 aa23.78■■□□□ 1.4
TSPAN9-204ENST00000444315 ABCA3Q99758 1704 aa23.78■■□□□ 1.4
TSPAN9-204ENST00000444315 ACEP12821 1306 aa23.77■■□□□ 1.4
TSPAN9-204ENST00000444315 RALGAPBQ86X10 1494 aa23.75■■□□□ 1.39
TSPAN9-204ENST00000444315 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
TSPAN9-204ENST00000444315 ALS2Q96Q42 1657 aa23.75■■□□□ 1.39
TSPAN9-204ENST00000444315 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms